RNA–Protein interactions for RNA: ENST00000375167.1

H2AFX-201, Transcript of H2A histone family member X, humanhuman

TSL 2

Gene H2AFX, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-201ENST00000375167 MPV17LQ2QL34 196 aa13.32□□□□□ -0.28
H2AFX-201ENST00000375167 PAN3Q58A45 887 aaKnown RBP13.32□□□□□ -0.28
H2AFX-201ENST00000375167 CROCCP3Q8IVE0 287 aa13.32□□□□□ -0.28
H2AFX-201ENST00000375167 OR13F1Q8NGS4 319 aa13.32□□□□□ -0.28
H2AFX-201ENST00000375167 EAF1Q96JC9 268 aaPredicted RBP13.32□□□□□ -0.28
H2AFX-201ENST00000375167 HSPB9Q9BQS6 159 aa13.32□□□□□ -0.28
H2AFX-201ENST00000375167 TXNL4BQ9NX01 149 aaKnown RBP13.32□□□□□ -0.28
H2AFX-201ENST00000375167 IGHV4OR15-8A0A075B7B6 117 aa13.31□□□□□ -0.28
H2AFX-201ENST00000375167 A0A087WW49 117 aa13.31□□□□□ -0.28
H2AFX-201ENST00000375167 SHISA3A0PJX4 238 aa13.31□□□□□ -0.28
H2AFX-201ENST00000375167 H0Y980 276 aa13.31□□□□□ -0.28
H2AFX-201ENST00000375167 CNIH1O95406 144 aa13.31□□□□□ -0.28
H2AFX-201ENST00000375167 SOX6P35712 828 aa13.31□□□□□ -0.28
H2AFX-201ENST00000375167 GLIPR1P48060 266 aa13.31□□□□□ -0.28
H2AFX-201ENST00000375167 KCNJ3P48549 501 aa13.31□□□□□ -0.28
H2AFX-201ENST00000375167 EBI3Q14213 229 aa13.31□□□□□ -0.28
H2AFX-201ENST00000375167 KRBOX4Q5JUW0 171 aa13.31□□□□□ -0.28
H2AFX-201ENST00000375167 C22orf42Q6IC83 251 aa13.31□□□□□ -0.28
H2AFX-201ENST00000375167 LINC00322Q6ZN03 302 aaPredicted RBP13.31□□□□□ -0.28
H2AFX-201ENST00000375167 OR6M1Q8NGM8 313 aa13.31□□□□□ -0.28
H2AFX-201ENST00000375167 BARHL1Q9BZE3 327 aa13.31□□□□□ -0.28
H2AFX-201ENST00000375167 CST11Q9H112 138 aa13.31□□□□□ -0.28
H2AFX-201ENST00000375167 PLGRKTQ9HBL7 147 aa13.31□□□□□ -0.28
H2AFX-201ENST00000375167 HERC1Q15751 4861 aa13.3□□□□□ -0.28
H2AFX-201ENST00000375167 ODAMA1E959 279 aa13.3□□□□□ -0.28
H2AFX-201ENST00000375167 HSPB6O14558 160 aa13.3□□□□□ -0.28
H2AFX-201ENST00000375167 SLC22A1O15245 554 aa13.3□□□□□ -0.28
H2AFX-201ENST00000375167 CRTAPO75718 401 aaPredicted RBP13.3□□□□□ -0.28
H2AFX-201ENST00000375167 MGMTP16455 207 aa13.3□□□□□ -0.28
H2AFX-201ENST00000375167 RAB3BP20337 219 aa13.3□□□□□ -0.28
H2AFX-201ENST00000375167 NFYBP25208 207 aa13.3□□□□□ -0.28
H2AFX-201ENST00000375167 HTR2CP28335 458 aa13.3□□□□□ -0.28
H2AFX-201ENST00000375167 PAX5Q02548 391 aa13.3□□□□□ -0.28
H2AFX-201ENST00000375167 ATXN7L3Q14CW9 347 aaPredicted RBP13.3□□□□□ -0.28
H2AFX-201ENST00000375167 SUMF2Q8NBJ7 301 aa13.3□□□□□ -0.28
H2AFX-201ENST00000375167 TMEM104Q8NE00 496 aa13.3□□□□□ -0.28
H2AFX-201ENST00000375167 CORO2AQ92828 525 aa13.3□□□□□ -0.28
H2AFX-201ENST00000375167 COQ2Q96H96 371 aa13.3□□□□□ -0.28
H2AFX-201ENST00000375167 BCL7BQ9BQE9 202 aa13.3□□□□□ -0.28
H2AFX-201ENST00000375167 DPCDQ9BVM2 203 aaPredicted RBP13.3□□□□□ -0.28
H2AFX-201ENST00000375167 SELENOIQ9C0D9 397 aa13.3□□□□□ -0.28
H2AFX-201ENST00000375167 TOLLIPQ9H0E2 274 aa13.3□□□□□ -0.28
H2AFX-201ENST00000375167 NCOR1P1Q9H4R4 102 aa13.3□□□□□ -0.28
H2AFX-201ENST00000375167 SIGLEC8Q9NYZ4 499 aa13.3□□□□□ -0.28
H2AFX-201ENST00000375167 ZNF581Q9P0T4 197 aa13.3□□□□□ -0.28
H2AFX-201ENST00000375167 AK6Q9Y3D8 172 aaKnown RBP13.3□□□□□ -0.28
H2AFX-201ENST00000375167 V9GY05 133 aa13.3□□□□□ -0.28
H2AFX-201ENST00000375167 DYNC1H1Q14204 4646 aaKnown RBP13.29□□□□□ -0.28
H2AFX-201ENST00000375167 A0A1B0GVY2 172 aa13.29□□□□□ -0.28
H2AFX-201ENST00000375167 GADD45AP24522 165 aa13.29□□□□□ -0.28
H2AFX-201ENST00000375167 RAB9AP51151 201 aa13.29□□□□□ -0.28
H2AFX-201ENST00000375167 DIAPH2-AS1Q14236 149 aa13.29□□□□□ -0.28
H2AFX-201ENST00000375167 IZUMO1Q8IYV9 350 aa13.29□□□□□ -0.28
H2AFX-201ENST00000375167 Q8N6K4 173 aa13.29□□□□□ -0.28
H2AFX-201ENST00000375167 OR2T10Q8NGZ9 312 aa13.29□□□□□ -0.28
H2AFX-201ENST00000375167 KCTD12Q96CX2 325 aaKnown RBP13.29□□□□□ -0.28
H2AFX-201ENST00000375167 YIPF6Q96EC8 236 aa13.29□□□□□ -0.28
H2AFX-201ENST00000375167 GFI1Q99684 422 aa13.29□□□□□ -0.28
H2AFX-201ENST00000375167 FUNDC2Q9BWH2 189 aa13.29□□□□□ -0.28
H2AFX-201ENST00000375167 OR51E2Q9H255 320 aa13.29□□□□□ -0.28
H2AFX-201ENST00000375167 BANF2Q9H503 90 aa13.29□□□□□ -0.28
H2AFX-201ENST00000375167 PLEKHA3Q9HB20 300 aa13.29□□□□□ -0.28
H2AFX-201ENST00000375167 SPACA1Q9HBV2 294 aa13.29□□□□□ -0.28
H2AFX-201ENST00000375167 ING3Q9NXR8 418 aa13.29□□□□□ -0.28
H2AFX-201ENST00000375167 DNAH11Q96DT5 4516 aa13.29□□□□□ -0.28
H2AFX-201ENST00000375167 FAM90A10PA6NDY2 464 aa13.28□□□□□ -0.28
H2AFX-201ENST00000375167 FAM90A7PA6NKC0 464 aa13.28□□□□□ -0.28
H2AFX-201ENST00000375167 FAM90A23PA8MXZ1 464 aa13.28□□□□□ -0.28
H2AFX-201ENST00000375167 J3QR06 171 aa13.28□□□□□ -0.28
H2AFX-201ENST00000375167 SLC17A2O00624 439 aa13.28□□□□□ -0.28
H2AFX-201ENST00000375167 BPNT1O95861 308 aa13.28□□□□□ -0.28
H2AFX-201ENST00000375167 TFAP2AP05549 437 aa13.28□□□□□ -0.28
H2AFX-201ENST00000375167 LGALS1P09382 135 aaKnown RBP13.28□□□□□ -0.28
H2AFX-201ENST00000375167 PPIFP30405 207 aaKnown RBP13.28□□□□□ -0.28
H2AFX-201ENST00000375167 ALDH3B2P48448 385 aa13.28□□□□□ -0.28
H2AFX-201ENST00000375167 UTF1Q5T230 341 aa13.28□□□□□ -0.28
H2AFX-201ENST00000375167 ATAD3CQ5T2N8 411 aa13.28□□□□□ -0.28
H2AFX-201ENST00000375167 ZNF565Q8N9K5 539 aa13.28□□□□□ -0.28
H2AFX-201ENST00000375167 KCNG3Q8TAE7 436 aa13.28□□□□□ -0.28
H2AFX-201ENST00000375167 FLYWCH2Q96CP2 140 aaKnown RBP13.28□□□□□ -0.28
H2AFX-201ENST00000375167 Q96M66 194 aa13.28□□□□□ -0.28
H2AFX-201ENST00000375167 S1PR3Q99500 378 aa13.28□□□□□ -0.28
H2AFX-201ENST00000375167 OR6C3Q9NZP0 311 aa13.28□□□□□ -0.28
H2AFX-201ENST00000375167 DNAH6Q9C0G6 4158 aa13.27□□□□□ -0.28
H2AFX-201ENST00000375167 RGS11O94810 467 aa13.27□□□□□ -0.29
H2AFX-201ENST00000375167 IGLV1-40P01703 118 aa13.27□□□□□ -0.29
H2AFX-201ENST00000375167 RAB11BQ15907 218 aa13.27□□□□□ -0.29
H2AFX-201ENST00000375167 RSBN1Q5VWQ0 802 aaPredicted RBP13.27□□□□□ -0.29
H2AFX-201ENST00000375167 MOB3BQ86TA1 216 aa13.27□□□□□ -0.29
H2AFX-201ENST00000375167 RAB2BQ8WUD1 216 aa13.27□□□□□ -0.29
H2AFX-201ENST00000375167 FAM46BQ96A09 425 aa13.27□□□□□ -0.29
H2AFX-201ENST00000375167 THAP7Q9BT49 309 aaPredicted RBP13.27□□□□□ -0.29
H2AFX-201ENST00000375167 RCC2Q9P258 522 aaKnown RBP13.27□□□□□ -0.29
H2AFX-201ENST00000375167 KIF25Q9UIL4 384 aa13.27□□□□□ -0.29
H2AFX-201ENST00000375167 WSB1Q9Y6I7 421 aa13.27□□□□□ -0.29
H2AFX-201ENST00000375167 FAT2Q9NYQ8 4349 aa13.27□□□□□ -0.29
H2AFX-201ENST00000375167 MEIKINA0A087WXM9 373 aa13.26□□□□□ -0.29
H2AFX-201ENST00000375167 IGHV3-72A0A0B4J1Y9 119 aa13.26□□□□□ -0.29
H2AFX-201ENST00000375167 NOTOA8MTQ0 251 aa13.26□□□□□ -0.29
H2AFX-201ENST00000375167 QRFPP83859 136 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms