RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 AGMATQ9BSE5 352 aa12.02□□□□□ -0.48
CD48-201ENST00000368045 MAP1LC3BQ9GZQ8 125 aa12.02□□□□□ -0.48
CD48-201ENST00000368045 CTDSP1Q9GZU7 261 aa12.02□□□□□ -0.48
CD48-201ENST00000368045 CXXC4Q9H2H0 198 aa12.02□□□□□ -0.48
CD48-201ENST00000368045 RBKSQ9H477 322 aa12.02□□□□□ -0.48
CD48-201ENST00000368045 VSIRQ9H7M9 311 aa12.02□□□□□ -0.48
CD48-201ENST00000368045 LAMP3Q9UQV4 416 aa12.02□□□□□ -0.48
CD48-201ENST00000368045 C12orf77C9JDV5 145 aa12.02□□□□□ -0.49
CD48-201ENST00000368045 CLDN34H7C241 214 aa12.02□□□□□ -0.49
CD48-201ENST00000368045 CDX4O14627 284 aaPredicted RBP12.02□□□□□ -0.49
CD48-201ENST00000368045 CLDN1O95832 211 aa12.02□□□□□ -0.49
CD48-201ENST00000368045 GRPP07492 148 aa12.02□□□□□ -0.49
CD48-201ENST00000368045 CXCL1P09341 107 aa12.02□□□□□ -0.49
CD48-201ENST00000368045 IL2RGP31785 369 aa12.02□□□□□ -0.49
CD48-201ENST00000368045 ERVFRD-1P60508 538 aa12.02□□□□□ -0.49
CD48-201ENST00000368045 FAM214BQ7L5A3 538 aa12.02□□□□□ -0.49
CD48-201ENST00000368045 C1orf87Q8N0U7 546 aa12.02□□□□□ -0.49
CD48-201ENST00000368045 CIB3Q96Q77 187 aaPredicted RBP12.02□□□□□ -0.49
CD48-201ENST00000368045 TMEM147Q9BVK8 224 aa12.02□□□□□ -0.49
CD48-201ENST00000368045 MRPL37Q9BZE1 423 aaKnown RBP12.02□□□□□ -0.49
CD48-201ENST00000368045 SDF2L1Q9HCN8 221 aa12.02□□□□□ -0.49
CD48-201ENST00000368045 GSN-AS1Q9NRJ2 163 aa12.02□□□□□ -0.49
CD48-201ENST00000368045 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.02□□□□□ -0.49
CD48-201ENST00000368045 RAB29O14966 203 aa12.01□□□□□ -0.49
CD48-201ENST00000368045 IGHG3P01860 377 aa12.01□□□□□ -0.49
CD48-201ENST00000368045 OR3A1P47881 315 aa12.01□□□□□ -0.49
CD48-201ENST00000368045 ERVS71-1P61550 626 aa12.01□□□□□ -0.49
CD48-201ENST00000368045 ALKBH6Q3KRA9 238 aa12.01□□□□□ -0.49
CD48-201ENST00000368045 ZNF343Q6P1L6 599 aa12.01□□□□□ -0.49
CD48-201ENST00000368045 C1orf162Q8NEQ5 155 aaPredicted RBP12.01□□□□□ -0.49
CD48-201ENST00000368045 OR1L1Q8NH94 360 aa12.01□□□□□ -0.49
CD48-201ENST00000368045 KLF14Q8TD94 323 aaPredicted RBP12.01□□□□□ -0.49
CD48-201ENST00000368045 NINJ1Q92982 152 aa12.01□□□□□ -0.49
CD48-201ENST00000368045 TAAR6Q96RI8 345 aa12.01□□□□□ -0.49
CD48-201ENST00000368045 OR2D2Q9H210 308 aa12.01□□□□□ -0.49
CD48-201ENST00000368045 SLC39A9Q9NUM3 307 aa12.01□□□□□ -0.49
CD48-201ENST00000368045 ELOA3CA0A087WX78 387 aaPredicted RBP12□□□□□ -0.49
CD48-201ENST00000368045 LRRC30A6NM36 301 aa12□□□□□ -0.49
CD48-201ENST00000368045 IFNL4K9M1U5 179 aa12□□□□□ -0.49
CD48-201ENST00000368045 PSPNO60542 156 aa12□□□□□ -0.49
CD48-201ENST00000368045 CLDN14O95500 239 aa12□□□□□ -0.49
CD48-201ENST00000368045 LY86O95711 162 aa12□□□□□ -0.49
CD48-201ENST00000368045 HBZP02008 142 aa12□□□□□ -0.49
CD48-201ENST00000368045 OPN1MWP04001 364 aa12□□□□□ -0.49
CD48-201ENST00000368045 OPN1MW2P0DN77 364 aa12□□□□□ -0.49
CD48-201ENST00000368045 OPN1MW3P0DN78 364 aa12□□□□□ -0.49
CD48-201ENST00000368045 GUSBP1Q15486 140 aa12□□□□□ -0.49
CD48-201ENST00000368045 HES3Q5TGS1 186 aa12□□□□□ -0.49
CD48-201ENST00000368045 TRAT1Q6PIZ9 186 aa12□□□□□ -0.49
CD48-201ENST00000368045 ZNF66Q6ZN08 573 aa12□□□□□ -0.49
CD48-201ENST00000368045 UBALD1Q8TB05 177 aa12□□□□□ -0.49
CD48-201ENST00000368045 FAM216AQ8WUB2 273 aa12□□□□□ -0.49
CD48-201ENST00000368045 OBP2BQ9NPH6 170 aa12□□□□□ -0.49
CD48-201ENST00000368045 ARHGAP21Q5T5U3 1957 aa12□□□□□ -0.49
CD48-201ENST00000368045 TGIF2-C20orf24A0A0A6YYL0 155 aa12□□□□□ -0.49
CD48-201ENST00000368045 UBE2L5PA0A1B0GUS4 154 aa12□□□□□ -0.49
CD48-201ENST00000368045 CEBPZOSA8MTT3 80 aa12□□□□□ -0.49
CD48-201ENST00000368045 MPV17P39210 176 aa12□□□□□ -0.49
CD48-201ENST00000368045 TNFSF10P50591 281 aa12□□□□□ -0.49
CD48-201ENST00000368045 PAX5Q02548 391 aa12□□□□□ -0.49
CD48-201ENST00000368045 DHRS13Q6UX07 377 aa12□□□□□ -0.49
CD48-201ENST00000368045 ACP7Q6ZNF0 438 aa12□□□□□ -0.49
CD48-201ENST00000368045 SSX7Q7RTT5 188 aa12□□□□□ -0.49
CD48-201ENST00000368045 VASH2Q86V25 355 aa12□□□□□ -0.49
CD48-201ENST00000368045 WDR31Q8NA23 367 aa12□□□□□ -0.49
CD48-201ENST00000368045 LHX4Q969G2 390 aa12□□□□□ -0.49
CD48-201ENST00000368045 FAM210BQ96KR6 192 aa12□□□□□ -0.49
CD48-201ENST00000368045 LURAP1Q96LR2 239 aa12□□□□□ -0.49
CD48-201ENST00000368045 DOK5Q9P104 306 aa12□□□□□ -0.49
CD48-201ENST00000368045 TRBV24-1A0A075B6N3 115 aa11.99□□□□□ -0.49
CD48-201ENST00000368045 CTXND1A0A1B0GTU2 59 aa11.99□□□□□ -0.49
CD48-201ENST00000368045 SEC14L6B5MCN3 397 aa11.99□□□□□ -0.49
CD48-201ENST00000368045 TMEM250H0YL14 139 aa11.99□□□□□ -0.49
CD48-201ENST00000368045 CYB5BO43169 146 aa11.99□□□□□ -0.49
CD48-201ENST00000368045 ZNF737O75373 536 aa11.99□□□□□ -0.49
CD48-201ENST00000368045 LYZL6O75951 148 aa11.99□□□□□ -0.49
CD48-201ENST00000368045 IGKV3-15P01624 115 aa11.99□□□□□ -0.49
CD48-201ENST00000368045 COX5AP20674 150 aa11.99□□□□□ -0.49
CD48-201ENST00000368045 KITLGP21583 273 aa11.99□□□□□ -0.49
CD48-201ENST00000368045 CD82P27701 267 aa11.99□□□□□ -0.49
CD48-201ENST00000368045 HOXC12P31275 282 aa11.99□□□□□ -0.49
CD48-201ENST00000368045 FGF8P55075 233 aaPredicted RBP11.99□□□□□ -0.49
CD48-201ENST00000368045 NCMAPQ5T1S8 102 aa11.99□□□□□ -0.49
CD48-201ENST00000368045 OR8G2PQ6IF36 304 aa11.99□□□□□ -0.49
CD48-201ENST00000368045 C11orf53Q8IXP5 236 aa11.99□□□□□ -0.49
CD48-201ENST00000368045 C1orf174Q8IYL3 243 aa11.99□□□□□ -0.49
CD48-201ENST00000368045 DEFB123Q8N688 67 aa11.99□□□□□ -0.49
CD48-201ENST00000368045 NAT8Q9UHE5 227 aa11.99□□□□□ -0.49
CD48-201ENST00000368045 TINAGQ9UJW2 476 aa11.99□□□□□ -0.49
CD48-201ENST00000368045 R4GN57 208 aa11.99□□□□□ -0.49
CD48-201ENST00000368045 URGCP-MRPS24S4R325 110 aa11.99□□□□□ -0.49
CD48-201ENST00000368045 AHCTF1Q8WYP5 2266 aa11.98□□□□□ -0.49
CD48-201ENST00000368045 ODAMA1E959 279 aa11.98□□□□□ -0.49
CD48-201ENST00000368045 MLNRO43193 412 aa11.98□□□□□ -0.49
CD48-201ENST00000368045 RAMP3O60896 148 aa11.98□□□□□ -0.49
CD48-201ENST00000368045 KRASP01116 189 aa11.98□□□□□ -0.49
CD48-201ENST00000368045 S100A2P29034 98 aa11.98□□□□□ -0.49
CD48-201ENST00000368045 G6PCP35575 357 aa11.98□□□□□ -0.49
CD48-201ENST00000368045 ELLP55199 621 aaPredicted RBP11.98□□□□□ -0.49
CD48-201ENST00000368045 NDUFA6P56556 154 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms