RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 RND3P61587 244 aa9.25□□□□□ -0.93
CSNK1E-202ENST00000366216 C2orf68Q2NKX9 166 aa9.25□□□□□ -0.93
CSNK1E-202ENST00000366216 ABCA11PQ4W5N1 156 aa9.25□□□□□ -0.93
CSNK1E-202ENST00000366216 ZNF788Q6ZQV5 615 aa9.25□□□□□ -0.93
CSNK1E-202ENST00000366216 SGPP2Q8IWX5 399 aa9.25□□□□□ -0.93
CSNK1E-202ENST00000366216 CCDC71LQ8N9Z2 235 aa9.25□□□□□ -0.93
CSNK1E-202ENST00000366216 OR5M8Q8NGP6 311 aa9.25□□□□□ -0.93
CSNK1E-202ENST00000366216 COQ8AQ8NI60 647 aa9.25□□□□□ -0.93
CSNK1E-202ENST00000366216 TOMM40LQ969M1 308 aa9.25□□□□□ -0.93
CSNK1E-202ENST00000366216 GALNT14Q96FL9 552 aa9.25□□□□□ -0.93
CSNK1E-202ENST00000366216 KIRREL1Q96J84 757 aa9.25□□□□□ -0.93
CSNK1E-202ENST00000366216 ZNF665Q9H7R5 613 aa9.25□□□□□ -0.93
CSNK1E-202ENST00000366216 TMEM106BQ9NUM4 274 aa9.25□□□□□ -0.93
CSNK1E-202ENST00000366216 OR2W1Q9Y3N9 320 aa9.25□□□□□ -0.93
CSNK1E-202ENST00000366216 MAB21L2Q9Y586 359 aa9.25□□□□□ -0.93
CSNK1E-202ENST00000366216 COL7A1Q02388 2944 aa9.24□□□□□ -0.93
CSNK1E-202ENST00000366216 TRAV39A0A0B4J263 110 aa9.24□□□□□ -0.93
CSNK1E-202ENST00000366216 C12orf77C9JDV5 145 aa9.24□□□□□ -0.93
CSNK1E-202ENST00000366216 SIGLEC5O15389 551 aa9.24□□□□□ -0.93
CSNK1E-202ENST00000366216 PLXNB1O43157 2135 aa9.24□□□□□ -0.93
CSNK1E-202ENST00000366216 FSTL3O95633 263 aa9.24□□□□□ -0.93
CSNK1E-202ENST00000366216 TFF1P04155 84 aa9.24□□□□□ -0.93
CSNK1E-202ENST00000366216 GZMHP20718 246 aa9.24□□□□□ -0.93
CSNK1E-202ENST00000366216 GNRHRP30968 328 aa9.24□□□□□ -0.93
CSNK1E-202ENST00000366216 GLIPR1P48060 266 aa9.24□□□□□ -0.93
CSNK1E-202ENST00000366216 NKX2-5P52952 324 aaPredicted RBP9.24□□□□□ -0.93
CSNK1E-202ENST00000366216 H2BFSP57053 126 aa9.24□□□□□ -0.93
CSNK1E-202ENST00000366216 PIGPP57054 158 aa9.24□□□□□ -0.93
CSNK1E-202ENST00000366216 KIAA2026Q5HYC2 2103 aa9.24□□□□□ -0.93
CSNK1E-202ENST00000366216 LY6G6FQ5SQ64 297 aa9.24□□□□□ -0.93
CSNK1E-202ENST00000366216 FAM201AQ5SY85 155 aa9.24□□□□□ -0.93
CSNK1E-202ENST00000366216 LIN54Q6MZP7 749 aa9.24□□□□□ -0.93
CSNK1E-202ENST00000366216 C5orf24Q7Z6I8 188 aa9.24□□□□□ -0.93
CSNK1E-202ENST00000366216 ZNF565Q8N9K5 539 aa9.24□□□□□ -0.93
CSNK1E-202ENST00000366216 OR2T35Q8NGX2 323 aa9.24□□□□□ -0.93
CSNK1E-202ENST00000366216 NANPQ8TBE9 248 aa9.24□□□□□ -0.93
CSNK1E-202ENST00000366216 CASTOR1Q8WTX7 329 aa9.24□□□□□ -0.93
CSNK1E-202ENST00000366216 RTN4IP1Q8WWV3 396 aaPredicted RBP9.24□□□□□ -0.93
CSNK1E-202ENST00000366216 GALMQ96C23 342 aa9.24□□□□□ -0.93
CSNK1E-202ENST00000366216 GAFA1Q96PS6 74 aa9.24□□□□□ -0.93
CSNK1E-202ENST00000366216 NAA60Q9H7X0 242 aa9.24□□□□□ -0.93
CSNK1E-202ENST00000366216 RAB18Q9NP72 206 aa9.24□□□□□ -0.93
CSNK1E-202ENST00000366216 SLC2A9Q9NRM0 540 aa9.24□□□□□ -0.93
CSNK1E-202ENST00000366216 KCNIP3Q9Y2W7 256 aa9.24□□□□□ -0.93
CSNK1E-202ENST00000366216 PPIAL4EA0A075B759 164 aa9.23□□□□□ -0.93
CSNK1E-202ENST00000366216 IGHV1-69-2A0A0G2JMI3 117 aa9.23□□□□□ -0.93
CSNK1E-202ENST00000366216 TEX13DA0A0J9YY54 714 aaPredicted RBP9.23□□□□□ -0.93
CSNK1E-202ENST00000366216 ODAMA1E959 279 aa9.23□□□□□ -0.93
CSNK1E-202ENST00000366216 NKX6-3A6NJ46 265 aa9.23□□□□□ -0.93
CSNK1E-202ENST00000366216 PPIAL4DF5H284 164 aa9.23□□□□□ -0.93
CSNK1E-202ENST00000366216 G3V3Q6 166 aa9.23□□□□□ -0.93
CSNK1E-202ENST00000366216 SMLR1H3BR10 107 aa9.23□□□□□ -0.93
CSNK1E-202ENST00000366216 GPR31O00270 319 aa9.23□□□□□ -0.93
CSNK1E-202ENST00000366216 SNAPC5O75971 98 aa9.23□□□□□ -0.93
CSNK1E-202ENST00000366216 HBZP02008 142 aa9.23□□□□□ -0.93
CSNK1E-202ENST00000366216 PPIAL4FP0DN26 164 aa9.23□□□□□ -0.93
CSNK1E-202ENST00000366216 RBMXP38159 391 aaKnown RBP9.23□□□□□ -0.93
CSNK1E-202ENST00000366216 P2RX3P56373 397 aa9.23□□□□□ -0.93
CSNK1E-202ENST00000366216 SLC9A3R2Q15599 337 aa9.23□□□□□ -0.93
CSNK1E-202ENST00000366216 KCNJ8Q15842 424 aa9.23□□□□□ -0.93
CSNK1E-202ENST00000366216 DCAF12L2Q5VW00 463 aa9.23□□□□□ -0.93
CSNK1E-202ENST00000366216 KCTD9Q7L273 389 aa9.23□□□□□ -0.93
CSNK1E-202ENST00000366216 LDLRAD3Q86YD5 345 aa9.23□□□□□ -0.93
CSNK1E-202ENST00000366216 ZNRF1Q8ND25 227 aa9.23□□□□□ -0.93
CSNK1E-202ENST00000366216 OR10V1Q8NGI7 309 aa9.23□□□□□ -0.93
CSNK1E-202ENST00000366216 IL1F10Q8WWZ1 152 aa9.23□□□□□ -0.93
CSNK1E-202ENST00000366216 CHIAQ9BZP6 476 aa9.23□□□□□ -0.93
CSNK1E-202ENST00000366216 SLC5A7Q9GZV3 580 aa9.23□□□□□ -0.93
CSNK1E-202ENST00000366216 RAB9BQ9NP90 201 aa9.23□□□□□ -0.93
CSNK1E-202ENST00000366216 DCAF16Q9NXF7 216 aa9.23□□□□□ -0.93
CSNK1E-202ENST00000366216 OR6C3Q9NZP0 311 aa9.23□□□□□ -0.93
CSNK1E-202ENST00000366216 OR1A1Q9P1Q5 309 aa9.23□□□□□ -0.93
CSNK1E-202ENST00000366216 IGKV1D-13A0A0B4J2D9 117 aa9.22□□□□□ -0.93
CSNK1E-202ENST00000366216 C15orf65H3BRN8 121 aa9.22□□□□□ -0.93
CSNK1E-202ENST00000366216 TNFRSF13BO14836 293 aaPredicted RBP9.22□□□□□ -0.93
CSNK1E-202ENST00000366216 MPPED1O15442 326 aa9.22□□□□□ -0.93
CSNK1E-202ENST00000366216 HSPA12AO43301 675 aa9.22□□□□□ -0.93
CSNK1E-202ENST00000366216 NDUFA2O43678 99 aa9.22□□□□□ -0.93
CSNK1E-202ENST00000366216 SIX6O95475 246 aa9.22□□□□□ -0.93
CSNK1E-202ENST00000366216 GYPAP02724 150 aa9.22□□□□□ -0.93
CSNK1E-202ENST00000366216 WNT2P09544 360 aa9.22□□□□□ -0.93
CSNK1E-202ENST00000366216 IGKV1-13P0DP09 117 aa9.22□□□□□ -0.93
CSNK1E-202ENST00000366216 PRTN3P24158 256 aa9.22□□□□□ -0.93
CSNK1E-202ENST00000366216 COL8A2P25067 703 aa9.22□□□□□ -0.93
CSNK1E-202ENST00000366216 S100GP29377 79 aa9.22□□□□□ -0.93
CSNK1E-202ENST00000366216 GPR6P46095 362 aaPredicted RBP9.22□□□□□ -0.93
CSNK1E-202ENST00000366216 LUMP51884 338 aaPredicted RBP9.22□□□□□ -0.93
CSNK1E-202ENST00000366216 LMO4P61968 165 aa9.22□□□□□ -0.93
CSNK1E-202ENST00000366216 HTD2P86397 168 aa9.22□□□□□ -0.93
CSNK1E-202ENST00000366216 EDDM3AQ14507 147 aa9.22□□□□□ -0.93
CSNK1E-202ENST00000366216 TMEM187Q14656 261 aa9.22□□□□□ -0.93
CSNK1E-202ENST00000366216 MSMO1Q15800 293 aa9.22□□□□□ -0.93
CSNK1E-202ENST00000366216 ANKRD55Q3KP44 614 aa9.22□□□□□ -0.93
CSNK1E-202ENST00000366216 PHLDA2Q53GA4 152 aa9.22□□□□□ -0.93
CSNK1E-202ENST00000366216 RBMS3Q6XE24 437 aaKnown RBP9.22□□□□□ -0.93
CSNK1E-202ENST00000366216 LRTM2Q8N967 370 aa9.22□□□□□ -0.93
CSNK1E-202ENST00000366216 BVESQ8NE79 360 aa9.22□□□□□ -0.93
CSNK1E-202ENST00000366216 DEFB108BQ8NET1 73 aa9.22□□□□□ -0.93
CSNK1E-202ENST00000366216 OR13A1Q8NGR1 328 aa9.22□□□□□ -0.93
CSNK1E-202ENST00000366216 OR1L1Q8NH94 360 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms