RNA–Protein interactions for RNA: ENST00000359171.8

NUP98-203, Transcript of nucleoporin 98, humanhuman

TSL 5 BASIC

Gene NUP98, Length 7,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-203ENST00000359171 SRIP30626 198 aa12.6□□□□□ -0.39
NUP98-203ENST00000359171 HIKESHIQ53FT3 197 aa12.6□□□□□ -0.39
NUP98-203ENST00000359171 C9orf40Q8IXQ3 194 aa12.6□□□□□ -0.39
NUP98-203ENST00000359171 OR10AG1Q8NH19 301 aa12.6□□□□□ -0.39
NUP98-203ENST00000359171 ZNF430Q9H8G1 570 aaPredicted RBP12.6□□□□□ -0.39
NUP98-203ENST00000359171 LMX1BO60663 402 aa12.6□□□□□ -0.39
NUP98-203ENST00000359171 NPBWR2P48146 333 aa12.6□□□□□ -0.39
NUP98-203ENST00000359171 COPS9Q8WXC6 57 aa12.6□□□□□ -0.39
NUP98-203ENST00000359171 RGPD8O14715 1765 aaPredicted RBP12.6□□□□□ -0.39
NUP98-203ENST00000359171 RPL31P62899 125 aaKnown RBP12.6□□□□□ -0.39
NUP98-203ENST00000359171 SFXN3Q9BWM7 321 aa12.6□□□□□ -0.39
NUP98-203ENST00000359171 PARLQ9H300 379 aa12.6□□□□□ -0.39
NUP98-203ENST00000359171 RBFOX2O43251 390 aaKnown RBP eCLIP12.59□□□□□ -0.39
NUP98-203ENST00000359171 HTN1P15515 57 aa12.59□□□□□ -0.39
NUP98-203ENST00000359171 COL10A1Q03692 680 aa12.59□□□□□ -0.39
NUP98-203ENST00000359171 CXorf66Q5JRM2 361 aaPredicted RBP12.59□□□□□ -0.39
NUP98-203ENST00000359171 RFLNBQ8N5W9 214 aa12.59□□□□□ -0.39
NUP98-203ENST00000359171 RBKSQ9H477 322 aa12.59□□□□□ -0.39
NUP98-203ENST00000359171 PGPA6NDG6 321 aa12.59□□□□□ -0.39
NUP98-203ENST00000359171 OR11H4Q8NGC9 324 aa12.59□□□□□ -0.39
NUP98-203ENST00000359171 TMEM136Q6ZRR5 245 aa12.59□□□□□ -0.39
NUP98-203ENST00000359171 SPSB4Q96A44 273 aa12.59□□□□□ -0.39
NUP98-203ENST00000359171 ZNF385AQ96PM9 386 aaKnown RBP12.59□□□□□ -0.39
NUP98-203ENST00000359171 MBD1Q9UIS9 605 aaPredicted RBP12.59□□□□□ -0.39
NUP98-203ENST00000359171 C2orf83Q53S99 150 aa12.59□□□□□ -0.39
NUP98-203ENST00000359171 NUP98P52948 1817 aa12.59□□□□□ -0.39
NUP98-203ENST00000359171 C21orf140B9A014 251 aa12.59□□□□□ -0.39
NUP98-203ENST00000359171 GPR146Q96CH1 333 aa12.59□□□□□ -0.39
NUP98-203ENST00000359171 GGACTQ9BVM4 153 aa12.59□□□□□ -0.39
NUP98-203ENST00000359171 WDR54Q9H977 334 aa12.59□□□□□ -0.39
NUP98-203ENST00000359171 TMEM250H0YL14 139 aa12.58□□□□□ -0.39
NUP98-203ENST00000359171 SIGLEC5O15389 551 aa12.58□□□□□ -0.39
NUP98-203ENST00000359171 SIGLEC14Q08ET2 396 aa12.58□□□□□ -0.39
NUP98-203ENST00000359171 ZNF645Q8N7E2 425 aa12.58□□□□□ -0.39
NUP98-203ENST00000359171 RND1Q92730 232 aa12.58□□□□□ -0.39
NUP98-203ENST00000359171 YBX2Q9Y2T7 364 aaKnown RBP12.58□□□□□ -0.39
NUP98-203ENST00000359171 PGLYRP1O75594 196 aaPredicted RBP12.58□□□□□ -0.4
NUP98-203ENST00000359171 CA7P43166 264 aa12.58□□□□□ -0.4
NUP98-203ENST00000359171 H2BFSP57053 126 aa12.58□□□□□ -0.4
NUP98-203ENST00000359171 MIC13Q5XKP0 118 aa12.58□□□□□ -0.4
NUP98-203ENST00000359171 MDP1Q86V88 176 aa12.58□□□□□ -0.4
NUP98-203ENST00000359171 TMEM183AQ8IXX5 376 aa12.58□□□□□ -0.4
NUP98-203ENST00000359171 MMD2Q8IY49 270 aa12.58□□□□□ -0.4
NUP98-203ENST00000359171 ZNF488Q96MN9 340 aa12.58□□□□□ -0.4
NUP98-203ENST00000359171 PEF1Q9UBV8 284 aaKnown RBP12.58□□□□□ -0.4
NUP98-203ENST00000359171 SLC25A10Q9UBX3 287 aaPredicted RBP12.58□□□□□ -0.4
NUP98-203ENST00000359171 PPIAL4EA0A075B759 164 aa12.58□□□□□ -0.4
NUP98-203ENST00000359171 A0A1B0GV90 55 aa12.58□□□□□ -0.4
NUP98-203ENST00000359171 PPIAL4DF5H284 164 aa12.58□□□□□ -0.4
NUP98-203ENST00000359171 H7C2G1 150 aa12.58□□□□□ -0.4
NUP98-203ENST00000359171 C8orf88P0DMB2 117 aa12.58□□□□□ -0.4
NUP98-203ENST00000359171 PPIAL4FP0DN26 164 aa12.58□□□□□ -0.4
NUP98-203ENST00000359171 TCF24Q7RTU0 167 aa12.58□□□□□ -0.4
NUP98-203ENST00000359171 SYT8Q8NBV8 401 aa12.58□□□□□ -0.4
NUP98-203ENST00000359171 C19orf24Q9BVV8 132 aa12.58□□□□□ -0.4
NUP98-203ENST00000359171 PPIAL4AQ9Y536 164 aa12.58□□□□□ -0.4
NUP98-203ENST00000359171 STPG3Q8N7X2 389 aa12.58□□□□□ -0.4
NUP98-203ENST00000359171 OR4A5Q8NH83 315 aa12.58□□□□□ -0.4
NUP98-203ENST00000359171 IGKV3-7A0A075B6H7 116 aa12.58□□□□□ -0.4
NUP98-203ENST00000359171 CENPVL1A0A0U1RR11 272 aa12.58□□□□□ -0.4
NUP98-203ENST00000359171 AGFG2O95081 481 aa12.58□□□□□ -0.4
NUP98-203ENST00000359171 STAG3L3P0CL85 134 aa12.58□□□□□ -0.4
NUP98-203ENST00000359171 JOSD1Q15040 202 aaPredicted RBP12.58□□□□□ -0.4
NUP98-203ENST00000359171 TMEM177Q53S58 311 aa12.58□□□□□ -0.4
NUP98-203ENST00000359171 FAM181AQ8N9Y4 354 aa12.58□□□□□ -0.4
NUP98-203ENST00000359171 NRTNQ99748 197 aa12.58□□□□□ -0.4
NUP98-203ENST00000359171 ECSCRQ19T08 205 aa12.57□□□□□ -0.4
NUP98-203ENST00000359171 SELENOHQ8IZQ5 122 aaKnown RBP12.57□□□□□ -0.4
NUP98-203ENST00000359171 RPP25Q9BUL9 199 aaKnown RBP12.57□□□□□ -0.4
NUP98-203ENST00000359171 MRPL13Q9BYD1 178 aaKnown RBP12.57□□□□□ -0.4
NUP98-203ENST00000359171 DTX4Q9Y2E6 619 aa12.57□□□□□ -0.4
NUP98-203ENST00000359171 C9orf50Q5SZB4 431 aa12.57□□□□□ -0.4
NUP98-203ENST00000359171 ZNF721Q8TF20 911 aa12.57□□□□□ -0.4
NUP98-203ENST00000359171 VENTXO95231 258 aa12.57□□□□□ -0.4
NUP98-203ENST00000359171 RECKO95980 971 aa12.57□□□□□ -0.4
NUP98-203ENST00000359171 RTP5Q14D33 572 aa12.57□□□□□ -0.4
NUP98-203ENST00000359171 FGFRL1Q8N441 504 aa12.57□□□□□ -0.4
NUP98-203ENST00000359171 A0A1B0GV72 72 aa12.57□□□□□ -0.4
NUP98-203ENST00000359171 A0A1W2PPE3 182 aa12.57□□□□□ -0.4
NUP98-203ENST00000359171 FOXS1O43638 330 aa12.57□□□□□ -0.4
NUP98-203ENST00000359171 UPK3AO75631 287 aa12.57□□□□□ -0.4
NUP98-203ENST00000359171 LGALS3P17931 250 aaKnown RBP12.57□□□□□ -0.4
NUP98-203ENST00000359171 EMP1P54849 157 aa12.57□□□□□ -0.4
NUP98-203ENST00000359171 RPL8P62917 257 aaKnown RBP12.57□□□□□ -0.4
NUP98-203ENST00000359171 OR10J6PQ8NGY7 276 aa12.57□□□□□ -0.4
NUP98-203ENST00000359171 RARRES2Q99969 163 aa12.57□□□□□ -0.4
NUP98-203ENST00000359171 TRBV23-1A0A0A0MS06 115 aa12.57□□□□□ -0.4
NUP98-203ENST00000359171 A0A1W2PP11 408 aa12.57□□□□□ -0.4
NUP98-203ENST00000359171 ERVFRD-1P60508 538 aa12.57□□□□□ -0.4
NUP98-203ENST00000359171 PSG4Q00888 419 aa12.57□□□□□ -0.4
NUP98-203ENST00000359171 UNC119Q13432 240 aa12.57□□□□□ -0.4
NUP98-203ENST00000359171 IGHV3-21A0A0B4J1V1 117 aa12.56□□□□□ -0.4
NUP98-203ENST00000359171 C3AR1Q16581 482 aa12.56□□□□□ -0.4
NUP98-203ENST00000359171 ZNF714Q96N38 554 aa12.56□□□□□ -0.4
NUP98-203ENST00000359171 DIRC2Q96SL1 478 aa12.56□□□□□ -0.4
NUP98-203ENST00000359171 PSMG3Q9BT73 122 aaPredicted RBP12.56□□□□□ -0.4
NUP98-203ENST00000359171 TMEM52Q8NDY8 209 aa12.56□□□□□ -0.4
NUP98-203ENST00000359171 TJP1Q07157 1748 aa12.56□□□□□ -0.4
NUP98-203ENST00000359171 SCTP09683 121 aa12.56□□□□□ -0.4
NUP98-203ENST00000359171 MPV17P39210 176 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms