RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 NHLRC2Q8NBF2 726 aa16.04■□□□□ 0.16
UBE3C-201ENST00000348165 WNT5BQ9H1J7 359 aa16.04■□□□□ 0.16
UBE3C-201ENST00000348165 OR51B2Q9Y5P1 312 aa16.04■□□□□ 0.16
UBE3C-201ENST00000348165 TEX50A0A1B0GTY4 177 aa16.04■□□□□ 0.16
UBE3C-201ENST00000348165 FAM74A7A6NL05 159 aa16.04■□□□□ 0.16
UBE3C-201ENST00000348165 MFNGO00587 321 aa16.04■□□□□ 0.16
UBE3C-201ENST00000348165 AMTP48728 403 aa16.04■□□□□ 0.16
UBE3C-201ENST00000348165 FAM74A3Q4VXF1 159 aa16.04■□□□□ 0.16
UBE3C-201ENST00000348165 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.04■□□□□ 0.16
UBE3C-201ENST00000348165 ERVS71-1P61550 626 aa16.04■□□□□ 0.16
UBE3C-201ENST00000348165 NFAM1Q8NET5 270 aaPredicted RBP16.04■□□□□ 0.16
UBE3C-201ENST00000348165 SBF2Q86WG5 1849 aa16.04■□□□□ 0.16
UBE3C-201ENST00000348165 PAGE4O60829 102 aa16.03■□□□□ 0.16
UBE3C-201ENST00000348165 RCC1P18754 421 aaPredicted RBP16.03■□□□□ 0.16
UBE3C-201ENST00000348165 SPCS3P61009 180 aa16.03■□□□□ 0.16
UBE3C-201ENST00000348165 NHLH2Q02577 135 aa16.03■□□□□ 0.16
UBE3C-201ENST00000348165 VAX1Q5SQQ9 334 aa16.03■□□□□ 0.16
UBE3C-201ENST00000348165 C1orf100Q5SVJ3 147 aa16.03■□□□□ 0.16
UBE3C-201ENST00000348165 TEPPQ6URK8 271 aa16.03■□□□□ 0.16
UBE3C-201ENST00000348165 GPHA2Q96T91 129 aa16.03■□□□□ 0.16
UBE3C-201ENST00000348165 CHRNA10Q9GZZ6 450 aa16.03■□□□□ 0.16
UBE3C-201ENST00000348165 SRD5A3Q9H8P0 318 aa16.03■□□□□ 0.16
UBE3C-201ENST00000348165 TGFBR3LH3BV60 316 aa16.03■□□□□ 0.16
UBE3C-201ENST00000348165 NMBP08949 121 aa16.03■□□□□ 0.16
UBE3C-201ENST00000348165 ERVFRD-1P60508 538 aa16.03■□□□□ 0.16
UBE3C-201ENST00000348165 UBE2V2Q15819 145 aa16.03■□□□□ 0.16
UBE3C-201ENST00000348165 OR1L1Q8NH94 360 aa16.03■□□□□ 0.16
UBE3C-201ENST00000348165 CHAC2Q8WUX2 184 aa16.03■□□□□ 0.16
UBE3C-201ENST00000348165 ALX4Q9H161 411 aaPredicted RBP16.03■□□□□ 0.16
UBE3C-201ENST00000348165 SF3B6Q9Y3B4 125 aaKnown RBP16.03■□□□□ 0.16
UBE3C-201ENST00000348165 TRBV23-1A0A0A0MS06 115 aa16.03■□□□□ 0.16
UBE3C-201ENST00000348165 SLC25A38Q96DW6 304 aa16.03■□□□□ 0.16
UBE3C-201ENST00000348165 RHOVQ96L33 236 aa16.03■□□□□ 0.16
UBE3C-201ENST00000348165 DUXBA0A1W2PPF3 345 aa16.03■□□□□ 0.16
UBE3C-201ENST00000348165 NEURL1O76050 574 aa16.03■□□□□ 0.16
UBE3C-201ENST00000348165 HPRT1P00492 218 aa16.03■□□□□ 0.16
UBE3C-201ENST00000348165 C10orf113Q5VZT2 155 aa16.03■□□□□ 0.16
UBE3C-201ENST00000348165 SLC35E3Q7Z769 313 aa16.03■□□□□ 0.16
UBE3C-201ENST00000348165 ZNF716A6NP11 495 aa16.02■□□□□ 0.16
UBE3C-201ENST00000348165 DDTP30046 118 aa16.02■□□□□ 0.16
UBE3C-201ENST00000348165 GSX1Q9H4S2 264 aaPredicted RBP16.02■□□□□ 0.16
UBE3C-201ENST00000348165 CACNA1DQ01668 2161 aa16.02■□□□□ 0.16
UBE3C-201ENST00000348165 LOC105371267A0A1B0GV96 52 aa16.02■□□□□ 0.16
UBE3C-201ENST00000348165 CYB5R3P00387 301 aaPredicted RBP16.02■□□□□ 0.16
UBE3C-201ENST00000348165 ATP6V0CP27449 155 aa16.02■□□□□ 0.16
UBE3C-201ENST00000348165 WNT5AP41221 380 aa16.02■□□□□ 0.16
UBE3C-201ENST00000348165 RSPO4Q2I0M5 234 aaPredicted RBP16.02■□□□□ 0.16
UBE3C-201ENST00000348165 DCAF12L2Q5VW00 463 aa16.02■□□□□ 0.16
UBE3C-201ENST00000348165 OR2T10Q8NGZ9 312 aa16.02■□□□□ 0.16
UBE3C-201ENST00000348165 MANBALQ9NQG1 85 aa16.02■□□□□ 0.16
UBE3C-201ENST00000348165 SIRT7Q9NRC8 400 aa16.02■□□□□ 0.16
UBE3C-201ENST00000348165 DLL3Q9NYJ7 618 aa16.02■□□□□ 0.16
UBE3C-201ENST00000348165 RABAC1Q9UI14 185 aa16.02■□□□□ 0.16
UBE3C-201ENST00000348165 HOXB1P14653 301 aaPredicted RBP16.02■□□□□ 0.16
UBE3C-201ENST00000348165 RPEL1Q2QD12 228 aa16.02■□□□□ 0.16
UBE3C-201ENST00000348165 DPPA3Q6W0C5 159 aa16.02■□□□□ 0.16
UBE3C-201ENST00000348165 UFC1Q9Y3C8 167 aa16.02■□□□□ 0.16
UBE3C-201ENST00000348165 CHCHD2Q9Y6H1 151 aaPredicted RBP16.02■□□□□ 0.16
UBE3C-201ENST00000348165 SIAH2O43255 324 aa16.02■□□□□ 0.15
UBE3C-201ENST00000348165 WFDC3Q8IUB2 231 aa16.02■□□□□ 0.15
UBE3C-201ENST00000348165 COL6A6A6NMZ7 2263 aa16.02■□□□□ 0.15
UBE3C-201ENST00000348165 OR10C1Q96KK4 312 aa16.02■□□□□ 0.15
UBE3C-201ENST00000348165 TRBV5-7A0A0A0MS05 114 aa16.01■□□□□ 0.15
UBE3C-201ENST00000348165 C7orf66A4D0T2 115 aa16.01■□□□□ 0.15
UBE3C-201ENST00000348165 IGLV3-19P01714 112 aa16.01■□□□□ 0.15
UBE3C-201ENST00000348165 THY1P04216 161 aa16.01■□□□□ 0.15
UBE3C-201ENST00000348165 CRIPAKQ8N1N5 446 aa16.01■□□□□ 0.15
UBE3C-201ENST00000348165 FBLIM1Q8WUP2 373 aa16.01■□□□□ 0.15
UBE3C-201ENST00000348165 G6PC2Q9NQR9 355 aa16.01■□□□□ 0.15
UBE3C-201ENST00000348165 NAT8Q9UHE5 227 aa16.01■□□□□ 0.15
UBE3C-201ENST00000348165 KIF13BQ9NQT8 1826 aa16.01■□□□□ 0.15
UBE3C-201ENST00000348165 COX6B1P14854 86 aa16.01■□□□□ 0.15
UBE3C-201ENST00000348165 GUCA2BQ16661 112 aa16.01■□□□□ 0.15
UBE3C-201ENST00000348165 CD200R1LQ6Q8B3 271 aa16.01■□□□□ 0.15
UBE3C-201ENST00000348165 ZNF600Q6ZNG1 722 aa16.01■□□□□ 0.15
UBE3C-201ENST00000348165 AICDAQ9GZX7 198 aa16.01■□□□□ 0.15
UBE3C-201ENST00000348165 B4DEV8 164 aa16.01■□□□□ 0.15
UBE3C-201ENST00000348165 RECKO95980 971 aa16.01■□□□□ 0.15
UBE3C-201ENST00000348165 CSN3P07498 182 aa16.01■□□□□ 0.15
UBE3C-201ENST00000348165 OR10G8Q8NGN5 311 aa16.01■□□□□ 0.15
UBE3C-201ENST00000348165 A0A1B0GV90 55 aa16.01■□□□□ 0.15
UBE3C-201ENST00000348165 RUNX1Q01196 453 aa16.01■□□□□ 0.15
UBE3C-201ENST00000348165 KCNMB1Q16558 191 aa16.01■□□□□ 0.15
UBE3C-201ENST00000348165 ZNF385CQ66K41 422 aaPredicted RBP16.01■□□□□ 0.15
UBE3C-201ENST00000348165 PUSL1Q8N0Z8 303 aaKnown RBP16.01■□□□□ 0.15
UBE3C-201ENST00000348165 C5orf17Q8NAS9 161 aa16.01■□□□□ 0.15
UBE3C-201ENST00000348165 AURKAIP1Q9NWT8 199 aaPredicted RBP16.01■□□□□ 0.15
UBE3C-201ENST00000348165 VAX2Q9UIW0 290 aa16.01■□□□□ 0.15
UBE3C-201ENST00000348165 ODAMA1E959 279 aa16■□□□□ 0.15
UBE3C-201ENST00000348165 GAPDHP04406 335 aaKnown RBP16■□□□□ 0.15
UBE3C-201ENST00000348165 CRISP2P16562 243 aa16■□□□□ 0.15
UBE3C-201ENST00000348165 RPL27AP46776 148 aaKnown RBP16■□□□□ 0.15
UBE3C-201ENST00000348165 ZDHHC8Q9ULC8 765 aa16■□□□□ 0.15
UBE3C-201ENST00000348165 RNF115Q9Y4L5 304 aa16■□□□□ 0.15
UBE3C-201ENST00000348165 DMRT1Q9Y5R6 373 aa16■□□□□ 0.15
UBE3C-201ENST00000348165 F12P00748 615 aaPredicted RBP16■□□□□ 0.15
UBE3C-201ENST00000348165 DLK1P80370 383 aa16■□□□□ 0.15
UBE3C-201ENST00000348165 NUDT16L1Q9BRJ7 211 aaKnown RBP16■□□□□ 0.15
UBE3C-201ENST00000348165 ORM1P02763 201 aa16■□□□□ 0.15
UBE3C-201ENST00000348165 COL8A1P27658 744 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms