RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 YTHDF1Q9BYJ9 559 aaKnown RBP11.36□□□□□ -0.59
HMGN3-202ENST00000344726 RIMS4Q9H426 269 aaPredicted RBP11.36□□□□□ -0.59
HMGN3-202ENST00000344726 Q9H521 79 aa11.36□□□□□ -0.59
HMGN3-202ENST00000344726 RAB22AQ9UL26 194 aa11.36□□□□□ -0.59
HMGN3-202ENST00000344726 IGKV1-6A0A0C4DH72 117 aa11.35□□□□□ -0.59
HMGN3-202ENST00000344726 MYL9P24844 172 aa11.35□□□□□ -0.59
HMGN3-202ENST00000344726 RPL39P5Q59GN2 51 aa11.35□□□□□ -0.59
HMGN3-202ENST00000344726 ETV3LQ6ZN32 361 aa11.35□□□□□ -0.59
HMGN3-202ENST00000344726 ABHD14BQ96IU4 210 aa11.35□□□□□ -0.59
HMGN3-202ENST00000344726 CMSS1Q9BQ75 279 aaKnown RBP11.35□□□□□ -0.59
HMGN3-202ENST00000344726 AGMATQ9BSE5 352 aa11.35□□□□□ -0.59
HMGN3-202ENST00000344726 C12orf4Q9NQ89 552 aa11.35□□□□□ -0.59
HMGN3-202ENST00000344726 TXNL4BQ9NX01 149 aaKnown RBP11.35□□□□□ -0.59
HMGN3-202ENST00000344726 SLC23A1Q9UHI7 598 aa11.35□□□□□ -0.59
HMGN3-202ENST00000344726 RAB27BO00194 218 aa11.34□□□□□ -0.59
HMGN3-202ENST00000344726 PF4V1P10720 104 aa11.34□□□□□ -0.59
HMGN3-202ENST00000344726 SLC2A2P11168 524 aaPredicted RBP11.34□□□□□ -0.59
HMGN3-202ENST00000344726 ACTBP60709 375 aa11.34□□□□□ -0.59
HMGN3-202ENST00000344726 RPL23AP62750 156 aaKnown RBP11.34□□□□□ -0.59
HMGN3-202ENST00000344726 FOXB2Q5VYV0 432 aa11.34□□□□□ -0.59
HMGN3-202ENST00000344726 ZNF773Q6PK81 442 aa11.34□□□□□ -0.59
HMGN3-202ENST00000344726 FOXRED2Q8IWF2 684 aa11.34□□□□□ -0.59
HMGN3-202ENST00000344726 OR8H1Q8NGG4 311 aa11.34□□□□□ -0.59
HMGN3-202ENST00000344726 RASL11BQ9BPW5 248 aa11.34□□□□□ -0.59
HMGN3-202ENST00000344726 AURKAIP1Q9NWT8 199 aaPredicted RBP11.34□□□□□ -0.59
HMGN3-202ENST00000344726 AP4M1O00189 453 aa11.33□□□□□ -0.6
HMGN3-202ENST00000344726 MFNGO00587 321 aa11.33□□□□□ -0.6
HMGN3-202ENST00000344726 ITGB1BP1O14713 200 aa11.33□□□□□ -0.6
HMGN3-202ENST00000344726 PROP1O75360 226 aa11.33□□□□□ -0.6
HMGN3-202ENST00000344726 CT45A6P0DMU7 189 aa11.33□□□□□ -0.6
HMGN3-202ENST00000344726 CT45A5P0DMU8 189 aa11.33□□□□□ -0.6
HMGN3-202ENST00000344726 CT45A7P0DMV0 189 aa11.33□□□□□ -0.6
HMGN3-202ENST00000344726 GNB3P16520 340 aa11.33□□□□□ -0.6
HMGN3-202ENST00000344726 CD33P20138 364 aa11.33□□□□□ -0.6
HMGN3-202ENST00000344726 RAB6AP20340 208 aa11.33□□□□□ -0.6
HMGN3-202ENST00000344726 FGF9P31371 208 aaPredicted RBP11.33□□□□□ -0.6
HMGN3-202ENST00000344726 CEACAM6P40199 344 aa11.33□□□□□ -0.6
HMGN3-202ENST00000344726 MMDQ15546 238 aa11.33□□□□□ -0.6
HMGN3-202ENST00000344726 GLDNQ6ZMI3 551 aaPredicted RBP11.33□□□□□ -0.6
HMGN3-202ENST00000344726 LCNL1Q6ZST4 164 aa11.33□□□□□ -0.6
HMGN3-202ENST00000344726 OR10R2Q8NGX6 335 aa11.33□□□□□ -0.6
HMGN3-202ENST00000344726 FCGR1BQ92637 280 aa11.33□□□□□ -0.6
HMGN3-202ENST00000344726 RAB3CQ96E17 227 aa11.33□□□□□ -0.6
HMGN3-202ENST00000344726 C11orf54Q9H0W9 315 aaPredicted RBP11.33□□□□□ -0.6
HMGN3-202ENST00000344726 OR51E2Q9H255 320 aa11.33□□□□□ -0.6
HMGN3-202ENST00000344726 PIPOXQ9P0Z9 390 aa11.33□□□□□ -0.6
HMGN3-202ENST00000344726 MGAT4AQ9UM21 535 aa11.33□□□□□ -0.6
HMGN3-202ENST00000344726 STUB1Q9UNE7 303 aa11.33□□□□□ -0.6
HMGN3-202ENST00000344726 DNAH9Q9NYC9 4486 aa11.33□□□□□ -0.6
HMGN3-202ENST00000344726 TRDCB7Z8K6 153 aa11.32□□□□□ -0.6
HMGN3-202ENST00000344726 J3QL48 77 aa11.32□□□□□ -0.6
HMGN3-202ENST00000344726 RAB29O14966 203 aa11.32□□□□□ -0.6
HMGN3-202ENST00000344726 PF4P02776 101 aa11.32□□□□□ -0.6
HMGN3-202ENST00000344726 FCGR3AP08637 254 aa11.32□□□□□ -0.6
HMGN3-202ENST00000344726 CD3GP09693 182 aa11.32□□□□□ -0.6
HMGN3-202ENST00000344726 ZBTB25P24278 435 aa11.32□□□□□ -0.6
HMGN3-202ENST00000344726 SOX6P35712 828 aa11.32□□□□□ -0.6
HMGN3-202ENST00000344726 SLC35B1P78383 322 aa11.32□□□□□ -0.6
HMGN3-202ENST00000344726 CFHR3Q02985 330 aa11.32□□□□□ -0.6
HMGN3-202ENST00000344726 FAM71F2Q6NXP2 309 aa11.32□□□□□ -0.6
HMGN3-202ENST00000344726 FAM131AQ6UXB0 335 aa11.32□□□□□ -0.6
HMGN3-202ENST00000344726 LINC00482Q8N8I6 264 aa11.32□□□□□ -0.6
HMGN3-202ENST00000344726 RNF167Q9H6Y7 350 aa11.32□□□□□ -0.6
HMGN3-202ENST00000344726 NECAP2Q9NVZ3 263 aa11.32□□□□□ -0.6
HMGN3-202ENST00000344726 ZNF107Q9UII5 783 aaPredicted RBP11.32□□□□□ -0.6
HMGN3-202ENST00000344726 ELF5Q9UKW6 265 aaPredicted RBP11.32□□□□□ -0.6
HMGN3-202ENST00000344726 RNF150Q9ULK6 438 aa11.32□□□□□ -0.6
HMGN3-202ENST00000344726 RRP15Q9Y3B9 282 aaKnown RBP11.32□□□□□ -0.6
HMGN3-202ENST00000344726 A0A075B6Q4 140 aa11.31□□□□□ -0.6
HMGN3-202ENST00000344726 NBR2O15453 112 aa11.31□□□□□ -0.6
HMGN3-202ENST00000344726 HSPA12AO43301 675 aa11.31□□□□□ -0.6
HMGN3-202ENST00000344726 RPLP1P05386 114 aaKnown RBP11.31□□□□□ -0.6
HMGN3-202ENST00000344726 HIST1H1DP16402 221 aaKnown RBP11.31□□□□□ -0.6
HMGN3-202ENST00000344726 RANBP1P43487 201 aa11.31□□□□□ -0.6
HMGN3-202ENST00000344726 LINC00205P59089 165 aa11.31□□□□□ -0.6
HMGN3-202ENST00000344726 KRTAP10-11P60412 298 aa11.31□□□□□ -0.6
HMGN3-202ENST00000344726 C8orf86Q6ZUL3 223 aa11.31□□□□□ -0.6
HMGN3-202ENST00000344726 COMMD1Q8N668 190 aa11.31□□□□□ -0.6
HMGN3-202ENST00000344726 NPBQ8NG41 125 aa11.31□□□□□ -0.6
HMGN3-202ENST00000344726 MAFIPQ8WZ33 124 aa11.31□□□□□ -0.6
HMGN3-202ENST00000344726 PTX4Q96A99 478 aa11.31□□□□□ -0.6
HMGN3-202ENST00000344726 ZNF230Q9UIE0 474 aaPredicted RBP11.31□□□□□ -0.6
HMGN3-202ENST00000344726 TNCP24821 2201 aa11.3□□□□□ -0.6
HMGN3-202ENST00000344726 IGHV7-81A0A0B4J1V7 117 aa11.3□□□□□ -0.6
HMGN3-202ENST00000344726 NOTOA8MTQ0 251 aa11.3□□□□□ -0.6
HMGN3-202ENST00000344726 H0YJW9 148 aa11.3□□□□□ -0.6
HMGN3-202ENST00000344726 FABP7O15540 132 aa11.3□□□□□ -0.6
HMGN3-202ENST00000344726 NDUFA3O95167 84 aa11.3□□□□□ -0.6
HMGN3-202ENST00000344726 HLA-DRB1P01911 266 aa11.3□□□□□ -0.6
HMGN3-202ENST00000344726 IGF1P05019 195 aa11.3□□□□□ -0.6
HMGN3-202ENST00000344726 CLEC2LP0C7M8 214 aa11.3□□□□□ -0.6
HMGN3-202ENST00000344726 GSTT2P0CG29 244 aa11.3□□□□□ -0.6
HMGN3-202ENST00000344726 GSTT2BP0CG30 244 aa11.3□□□□□ -0.6
HMGN3-202ENST00000344726 SNRPBP14678 240 aaKnown RBP11.3□□□□□ -0.6
HMGN3-202ENST00000344726 THBS3P49746 956 aa11.3□□□□□ -0.6
HMGN3-202ENST00000344726 NEDD8Q15843 81 aa11.3□□□□□ -0.6
HMGN3-202ENST00000344726 PNLIPRP3Q17RR3 467 aa11.3□□□□□ -0.6
HMGN3-202ENST00000344726 C5orf64Q2M2E5 130 aa11.3□□□□□ -0.6
HMGN3-202ENST00000344726 IGSF11Q5DX21 431 aa11.3□□□□□ -0.6
HMGN3-202ENST00000344726 TEX38Q6PEX7 206 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms