RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 DCSTAMPQ9H295 470 aa10.59□□□□□ -0.71
SIRPB3P-201ENST00000340424 GHITMQ9H3K2 345 aa10.59□□□□□ -0.71
SIRPB3P-201ENST00000340424 CHMP1AQ9HD42 196 aaPredicted RBP10.59□□□□□ -0.71
SIRPB3P-201ENST00000340424 LIN7CQ9NUP9 197 aaKnown RBP10.59□□□□□ -0.71
SIRPB3P-201ENST00000340424 STEAP1Q9UHE8 339 aa10.59□□□□□ -0.71
SIRPB3P-201ENST00000340424 DAPK2Q9UIK4 370 aa10.59□□□□□ -0.71
SIRPB3P-201ENST00000340424 TSSC4Q9Y5U2 329 aaPredicted RBP10.59□□□□□ -0.71
SIRPB3P-201ENST00000340424 NOTCH1P46531 2555 aa10.59□□□□□ -0.71
SIRPB3P-201ENST00000340424 A0A0A6YYD4 124 aa10.58□□□□□ -0.72
SIRPB3P-201ENST00000340424 SLC31A2O15432 143 aa10.58□□□□□ -0.72
SIRPB3P-201ENST00000340424 IGHG2P01859 326 aa10.58□□□□□ -0.72
SIRPB3P-201ENST00000340424 VBP1P61758 197 aa10.58□□□□□ -0.72
SIRPB3P-201ENST00000340424 ZNF45Q02386 682 aa10.58□□□□□ -0.72
SIRPB3P-201ENST00000340424 HNF4GQ14541 408 aa10.58□□□□□ -0.72
SIRPB3P-201ENST00000340424 TIMM50Q3ZCQ8 353 aa10.58□□□□□ -0.72
SIRPB3P-201ENST00000340424 FOXRED2Q8IWF2 684 aa10.58□□□□□ -0.72
SIRPB3P-201ENST00000340424 LYG1Q8N1E2 194 aa10.58□□□□□ -0.72
SIRPB3P-201ENST00000340424 COMMD1Q8N668 190 aa10.58□□□□□ -0.72
SIRPB3P-201ENST00000340424 OR2AK2Q8NG84 335 aa10.58□□□□□ -0.72
SIRPB3P-201ENST00000340424 OR51D1Q8NGF3 324 aa10.58□□□□□ -0.72
SIRPB3P-201ENST00000340424 R3HDM4Q96D70 268 aa10.58□□□□□ -0.72
SIRPB3P-201ENST00000340424 GON7Q9BXV9 100 aa10.58□□□□□ -0.72
SIRPB3P-201ENST00000340424 C12orf4Q9NQ89 552 aa10.58□□□□□ -0.72
SIRPB3P-201ENST00000340424 RAB22AQ9UL26 194 aa10.58□□□□□ -0.72
SIRPB3P-201ENST00000340424 TCRBV4S1A1TA0A5B7 111 aa10.57□□□□□ -0.72
SIRPB3P-201ENST00000340424 PSMB11A5LHX3 300 aa10.57□□□□□ -0.72
SIRPB3P-201ENST00000340424 NCBP2LA6PVI3 153 aaKnown RBP10.57□□□□□ -0.72
SIRPB3P-201ENST00000340424 FOXI3A8MTJ6 420 aaPredicted RBP10.57□□□□□ -0.72
SIRPB3P-201ENST00000340424 ADARB2-AS1A8MUL3 147 aa10.57□□□□□ -0.72
SIRPB3P-201ENST00000340424 BOLA2-SMG1P6H3BVE0 249 aa10.57□□□□□ -0.72
SIRPB3P-201ENST00000340424 ITGB1BP1O14713 200 aa10.57□□□□□ -0.72
SIRPB3P-201ENST00000340424 LDLRAD4O15165 306 aa10.57□□□□□ -0.72
SIRPB3P-201ENST00000340424 KCNAB3O43448 404 aa10.57□□□□□ -0.72
SIRPB3P-201ENST00000340424 WIPF1O43516 503 aa10.57□□□□□ -0.72
SIRPB3P-201ENST00000340424 AIREO43918 545 aa10.57□□□□□ -0.72
SIRPB3P-201ENST00000340424 UPK1BO75841 260 aa10.57□□□□□ -0.72
SIRPB3P-201ENST00000340424 SLC6A1P30531 599 aa10.57□□□□□ -0.72
SIRPB3P-201ENST00000340424 PPP1CCP36873 323 aaKnown RBP10.57□□□□□ -0.72
SIRPB3P-201ENST00000340424 SLC35B1P78383 322 aa10.57□□□□□ -0.72
SIRPB3P-201ENST00000340424 IFITM3Q01628 133 aa10.57□□□□□ -0.72
SIRPB3P-201ENST00000340424 CBX3Q13185 183 aa10.57□□□□□ -0.72
SIRPB3P-201ENST00000340424 C2orf76Q3KRA6 126 aa10.57□□□□□ -0.72
SIRPB3P-201ENST00000340424 SLC35E3Q7Z769 313 aa10.57□□□□□ -0.72
SIRPB3P-201ENST00000340424 OR52L2PQ8NGH6 319 aa10.57□□□□□ -0.72
SIRPB3P-201ENST00000340424 MCFD2Q8NI22 146 aa10.57□□□□□ -0.72
SIRPB3P-201ENST00000340424 KCNK15Q9H427 330 aa10.57□□□□□ -0.72
SIRPB3P-201ENST00000340424 PIPOXQ9P0Z9 390 aa10.57□□□□□ -0.72
SIRPB3P-201ENST00000340424 A0A075B6Q4 140 aa10.56□□□□□ -0.72
SIRPB3P-201ENST00000340424 IGHV3-72A0A0B4J1Y9 119 aa10.56□□□□□ -0.72
SIRPB3P-201ENST00000340424 SH2D7A6NKC9 451 aaPredicted RBP10.56□□□□□ -0.72
SIRPB3P-201ENST00000340424 IFITM5A6NNB3 132 aa10.56□□□□□ -0.72
SIRPB3P-201ENST00000340424 SERPINE3A8MV23 424 aa10.56□□□□□ -0.72
SIRPB3P-201ENST00000340424 SOCS1O15524 211 aa10.56□□□□□ -0.72
SIRPB3P-201ENST00000340424 PTTG1O95997 202 aa10.56□□□□□ -0.72
SIRPB3P-201ENST00000340424 RAB3BP20337 219 aa10.56□□□□□ -0.72
SIRPB3P-201ENST00000340424 FGF9P31371 208 aaPredicted RBP10.56□□□□□ -0.72
SIRPB3P-201ENST00000340424 VEGFCP49767 419 aa10.56□□□□□ -0.72
SIRPB3P-201ENST00000340424 MRPS15P82914 257 aaKnown RBP10.56□□□□□ -0.72
SIRPB3P-201ENST00000340424 GNMTQ14749 295 aa10.56□□□□□ -0.72
SIRPB3P-201ENST00000340424 PDLIM3Q53GG5 364 aaPredicted RBP10.56□□□□□ -0.72
SIRPB3P-201ENST00000340424 FAM53AQ6NSI3 398 aaPredicted RBP10.56□□□□□ -0.72
SIRPB3P-201ENST00000340424 ZNF833PQ6ZTB9 187 aa10.56□□□□□ -0.72
SIRPB3P-201ENST00000340424 SETD6Q8TBK2 473 aa10.56□□□□□ -0.72
SIRPB3P-201ENST00000340424 IL1F10Q8WWZ1 152 aa10.56□□□□□ -0.72
SIRPB3P-201ENST00000340424 EDARADDQ8WWZ3 215 aa10.56□□□□□ -0.72
SIRPB3P-201ENST00000340424 PTX4Q96A99 478 aa10.56□□□□□ -0.72
SIRPB3P-201ENST00000340424 S1PR3Q99500 378 aa10.56□□□□□ -0.72
SIRPB3P-201ENST00000340424 RASL11BQ9BPW5 248 aa10.56□□□□□ -0.72
SIRPB3P-201ENST00000340424 ABCG5Q9H222 651 aa10.56□□□□□ -0.72
SIRPB3P-201ENST00000340424 AK3Q9UIJ7 227 aa10.56□□□□□ -0.72
SIRPB3P-201ENST00000340424 TMEM272A0A1B0GTI8 110 aa10.55□□□□□ -0.72
SIRPB3P-201ENST00000340424 AP4M1O00189 453 aa10.55□□□□□ -0.72
SIRPB3P-201ENST00000340424 RAB29O14966 203 aa10.55□□□□□ -0.72
SIRPB3P-201ENST00000340424 PF4V1P10720 104 aa10.55□□□□□ -0.72
SIRPB3P-201ENST00000340424 RAB6AP20340 208 aa10.55□□□□□ -0.72
SIRPB3P-201ENST00000340424 ZBTB25P24278 435 aa10.55□□□□□ -0.72
SIRPB3P-201ENST00000340424 GADD45AP24522 165 aa10.55□□□□□ -0.72
SIRPB3P-201ENST00000340424 TMEM50BP56557 158 aa10.55□□□□□ -0.72
SIRPB3P-201ENST00000340424 CLDN12P56749 244 aa10.55□□□□□ -0.72
SIRPB3P-201ENST00000340424 HLA-DRB3P79483 266 aa10.55□□□□□ -0.72
SIRPB3P-201ENST00000340424 TCTEX1D4Q5JR98 221 aa10.55□□□□□ -0.72
SIRPB3P-201ENST00000340424 HES5Q5TA89 166 aa10.55□□□□□ -0.72
SIRPB3P-201ENST00000340424 ODF3L1Q8IXM7 274 aa10.55□□□□□ -0.72
SIRPB3P-201ENST00000340424 Q8N9W7 124 aa10.55□□□□□ -0.72
SIRPB3P-201ENST00000340424 ARHGAP5-AS1Q96IT6 56 aa10.55□□□□□ -0.72
SIRPB3P-201ENST00000340424 CMSS1Q9BQ75 279 aaKnown RBP10.55□□□□□ -0.72
SIRPB3P-201ENST00000340424 CENPOQ9BU64 300 aa10.55□□□□□ -0.72
SIRPB3P-201ENST00000340424 PECRQ9BY49 303 aa10.55□□□□□ -0.72
SIRPB3P-201ENST00000340424 IFI27L2Q9H2X8 130 aa10.55□□□□□ -0.72
SIRPB3P-201ENST00000340424 PLSCR3Q9NRY6 295 aa10.55□□□□□ -0.72
SIRPB3P-201ENST00000340424 SLC23A1Q9UHI7 598 aa10.55□□□□□ -0.72
SIRPB3P-201ENST00000340424 ZNF580Q9UK33 172 aa10.55□□□□□ -0.72
SIRPB3P-201ENST00000340424 PAIP2BQ9ULR5 123 aaKnown RBP10.55□□□□□ -0.72
SIRPB3P-201ENST00000340424 SAA2-SAA4A0A096LPE2 208 aa10.54□□□□□ -0.72
SIRPB3P-201ENST00000340424 METTL21EPA6NDL7 271 aa10.54□□□□□ -0.72
SIRPB3P-201ENST00000340424 DIRAS3O95661 229 aa10.54□□□□□ -0.72
SIRPB3P-201ENST00000340424 SAA2P0DJI9 122 aaPredicted RBP10.54□□□□□ -0.72
SIRPB3P-201ENST00000340424 GPR12P47775 334 aa10.54□□□□□ -0.72
SIRPB3P-201ENST00000340424 ARL6IP1Q15041 203 aa10.54□□□□□ -0.72
SIRPB3P-201ENST00000340424 KPRPQ5T749 579 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms