RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 ABHD14BQ96IU4 210 aa12.19□□□□□ -0.46
UBE3B-201ENST00000340074 AKR1E2Q96JD6 320 aa12.19□□□□□ -0.46
UBE3B-201ENST00000340074 CABLES2Q9BTV7 478 aa12.19□□□□□ -0.46
UBE3B-201ENST00000340074 C11orf54Q9H0W9 315 aaPredicted RBP12.19□□□□□ -0.46
UBE3B-201ENST00000340074 AUNIPQ9H7T9 357 aa12.19□□□□□ -0.46
UBE3B-201ENST00000340074 ZNF702PQ9H963 129 aa12.19□□□□□ -0.46
UBE3B-201ENST00000340074 SCOCQ9UIL1 159 aa12.19□□□□□ -0.46
UBE3B-201ENST00000340074 ZNF736B4DX44 427 aaPredicted RBP12.18□□□□□ -0.46
UBE3B-201ENST00000340074 TMEM11P17152 192 aa12.18□□□□□ -0.46
UBE3B-201ENST00000340074 PROK1P58294 105 aa12.18□□□□□ -0.46
UBE3B-201ENST00000340074 SPCS2Q15005 226 aa12.18□□□□□ -0.46
UBE3B-201ENST00000340074 Q6ZS46 218 aa12.18□□□□□ -0.46
UBE3B-201ENST00000340074 OR10J5Q8NHC4 309 aa12.18□□□□□ -0.46
UBE3B-201ENST00000340074 OR2T6Q8NHC8 308 aa12.18□□□□□ -0.46
UBE3B-201ENST00000340074 RAB2BQ8WUD1 216 aa12.18□□□□□ -0.46
UBE3B-201ENST00000340074 WFDC12Q8WWY7 111 aa12.18□□□□□ -0.46
UBE3B-201ENST00000340074 ACOT12Q8WYK0 555 aa12.18□□□□□ -0.46
UBE3B-201ENST00000340074 RBMXL1Q96E39 390 aaKnown RBP12.18□□□□□ -0.46
UBE3B-201ENST00000340074 AGMATQ9BSE5 352 aa12.18□□□□□ -0.46
UBE3B-201ENST00000340074 RDH8Q9NYR8 311 aa12.18□□□□□ -0.46
UBE3B-201ENST00000340074 PIPOXQ9P0Z9 390 aa12.18□□□□□ -0.46
UBE3B-201ENST00000340074 TRBV6-7A0A0A0MS04 114 aa12.17□□□□□ -0.46
UBE3B-201ENST00000340074 RAB29O14966 203 aa12.17□□□□□ -0.46
UBE3B-201ENST00000340074 EIF4EP06730 217 aaKnown RBP12.17□□□□□ -0.46
UBE3B-201ENST00000340074 CD1BP29016 333 aa12.17□□□□□ -0.46
UBE3B-201ENST00000340074 TMBIM6P55061 237 aa12.17□□□□□ -0.46
UBE3B-201ENST00000340074 SRSF4Q08170 494 aaKnown RBP12.17□□□□□ -0.46
UBE3B-201ENST00000340074 EBI3Q14213 229 aa12.17□□□□□ -0.46
UBE3B-201ENST00000340074 RPL39P5Q59GN2 51 aa12.17□□□□□ -0.46
UBE3B-201ENST00000340074 TMEM69Q5SWH9 247 aa12.17□□□□□ -0.46
UBE3B-201ENST00000340074 ZNF251Q9BRH9 671 aa12.17□□□□□ -0.46
UBE3B-201ENST00000340074 PRSS22Q9GZN4 317 aa12.17□□□□□ -0.46
UBE3B-201ENST00000340074 TOLLIPQ9H0E2 274 aa12.17□□□□□ -0.46
UBE3B-201ENST00000340074 RNF150Q9ULK6 438 aa12.17□□□□□ -0.46
UBE3B-201ENST00000340074 HPGDSO60760 199 aa12.16□□□□□ -0.46
UBE3B-201ENST00000340074 DIRAS3O95661 229 aa12.16□□□□□ -0.46
UBE3B-201ENST00000340074 APOA1P02647 267 aa12.16□□□□□ -0.46
UBE3B-201ENST00000340074 AMY1AP04745 511 aa12.16□□□□□ -0.46
UBE3B-201ENST00000340074 AMY2AP04746 511 aa12.16□□□□□ -0.46
UBE3B-201ENST00000340074 ZNF182P17025 639 aaPredicted RBP12.16□□□□□ -0.46
UBE3B-201ENST00000340074 TAS2R20P59543 309 aa12.16□□□□□ -0.46
UBE3B-201ENST00000340074 KRTAP10-3P60369 221 aa12.16□□□□□ -0.46
UBE3B-201ENST00000340074 LSAMPQ13449 338 aa12.16□□□□□ -0.46
UBE3B-201ENST00000340074 ABCA11PQ4W5N1 156 aa12.16□□□□□ -0.46
UBE3B-201ENST00000340074 Q8N2B8 174 aa12.16□□□□□ -0.46
UBE3B-201ENST00000340074 GVQW1Q8N7I0 195 aa12.16□□□□□ -0.46
UBE3B-201ENST00000340074 OR2T10Q8NGZ9 312 aa12.16□□□□□ -0.46
UBE3B-201ENST00000340074 AP3S1Q92572 193 aa12.16□□□□□ -0.46
UBE3B-201ENST00000340074 EAF1Q96JC9 268 aaPredicted RBP12.16□□□□□ -0.46
UBE3B-201ENST00000340074 CMTM3Q96MX0 182 aa12.16□□□□□ -0.46
UBE3B-201ENST00000340074 S1PR3Q99500 378 aa12.16□□□□□ -0.46
UBE3B-201ENST00000340074 NABP2Q9BQ15 211 aa12.16□□□□□ -0.46
UBE3B-201ENST00000340074 GINS4Q9BRT9 223 aa12.16□□□□□ -0.46
UBE3B-201ENST00000340074 MRPL20Q9BYC9 149 aaKnown RBP12.16□□□□□ -0.46
UBE3B-201ENST00000340074 MOB4Q9Y3A3 225 aa12.16□□□□□ -0.46
UBE3B-201ENST00000340074 SH2D7A6NKC9 451 aaPredicted RBP12.15□□□□□ -0.46
UBE3B-201ENST00000340074 ELK1P19419 428 aa12.15□□□□□ -0.46
UBE3B-201ENST00000340074 FAM71F2Q6NXP2 309 aa12.15□□□□□ -0.46
UBE3B-201ENST00000340074 MZT2AQ6P582 158 aa12.15□□□□□ -0.46
UBE3B-201ENST00000340074 SHISA2Q6UWI4 295 aa12.15□□□□□ -0.46
UBE3B-201ENST00000340074 BCL7BQ9BQE9 202 aa12.15□□□□□ -0.46
UBE3B-201ENST00000340074 GHITMQ9H3K2 345 aa12.15□□□□□ -0.46
UBE3B-201ENST00000340074 SERTAD4Q9NUC0 356 aa12.15□□□□□ -0.46
UBE3B-201ENST00000340074 ANXA10Q9UJ72 324 aa12.15□□□□□ -0.46
UBE3B-201ENST00000340074 MEIS3P1A6NDR6 274 aa12.14□□□□□ -0.47
UBE3B-201ENST00000340074 M0QZK8 103 aa12.14□□□□□ -0.47
UBE3B-201ENST00000340074 MOSP00540 346 aa12.14□□□□□ -0.47
UBE3B-201ENST00000340074 FCER2P06734 321 aa12.14□□□□□ -0.47
UBE3B-201ENST00000340074 OR8U9P0C7N5 309 aa12.14□□□□□ -0.47
UBE3B-201ENST00000340074 ARSJQ5FYB0 599 aaPredicted RBP12.14□□□□□ -0.47
UBE3B-201ENST00000340074 C11orf88Q6PI97 169 aa12.14□□□□□ -0.47
UBE3B-201ENST00000340074 H1FOOQ8IZA3 346 aaPredicted RBP12.14□□□□□ -0.47
UBE3B-201ENST00000340074 Q8N6K4 173 aa12.14□□□□□ -0.47
UBE3B-201ENST00000340074 C5orf56Q8N8D9 126 aa12.14□□□□□ -0.47
UBE3B-201ENST00000340074 OR8U1Q8NH10 309 aa12.14□□□□□ -0.47
UBE3B-201ENST00000340074 ISOC1Q96CN7 298 aa12.14□□□□□ -0.47
UBE3B-201ENST00000340074 ZNF221Q9UK13 617 aa12.14□□□□□ -0.47
UBE3B-201ENST00000340074 TET2Q6N021 2002 aaPredicted RBP12.14□□□□□ -0.47
UBE3B-201ENST00000340074 SMIM31A0A1B0GVY4 71 aa12.13□□□□□ -0.47
UBE3B-201ENST00000340074 NCBP2LA6PVI3 153 aaKnown RBP12.13□□□□□ -0.47
UBE3B-201ENST00000340074 H3BMQ9 156 aa12.13□□□□□ -0.47
UBE3B-201ENST00000340074 NOL3O60936 208 aaKnown RBP12.13□□□□□ -0.47
UBE3B-201ENST00000340074 PROP1O75360 226 aa12.13□□□□□ -0.47
UBE3B-201ENST00000340074 CTXN2P0C2S0 81 aa12.13□□□□□ -0.47
UBE3B-201ENST00000340074 SOX6P35712 828 aa12.13□□□□□ -0.47
UBE3B-201ENST00000340074 GPR12P47775 334 aa12.13□□□□□ -0.47
UBE3B-201ENST00000340074 TMEM95Q3KNT9 176 aa12.13□□□□□ -0.47
UBE3B-201ENST00000340074 CNIH2Q6PI25 160 aa12.13□□□□□ -0.47
UBE3B-201ENST00000340074 HOGA1Q86XE5 327 aa12.13□□□□□ -0.47
UBE3B-201ENST00000340074 BEST4Q8NFU0 473 aa12.13□□□□□ -0.47
UBE3B-201ENST00000340074 OR2D2Q9H210 308 aa12.13□□□□□ -0.47
UBE3B-201ENST00000340074 CEPT1Q9Y6K0 416 aa12.13□□□□□ -0.47
UBE3B-201ENST00000340074 FGF16O43320 207 aa12.12□□□□□ -0.47
UBE3B-201ENST00000340074 HLA-DQB1P01920 261 aa12.12□□□□□ -0.47
UBE3B-201ENST00000340074 CT45A6P0DMU7 189 aa12.12□□□□□ -0.47
UBE3B-201ENST00000340074 CT45A5P0DMU8 189 aa12.12□□□□□ -0.47
UBE3B-201ENST00000340074 CT45A7P0DMV0 189 aa12.12□□□□□ -0.47
UBE3B-201ENST00000340074 VSIG10L2P0DP72 767 aa12.12□□□□□ -0.47
UBE3B-201ENST00000340074 VDAC2P45880 294 aaPredicted RBP12.12□□□□□ -0.47
UBE3B-201ENST00000340074 F2RL1P55085 397 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms