RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 PITX3O75364 302 aa13.48□□□□□ -0.25
HPS1-202ENST00000338546 SCGB1D2O95969 90 aa13.48□□□□□ -0.25
HPS1-202ENST00000338546 PLAUP00749 431 aa13.48□□□□□ -0.25
HPS1-202ENST00000338546 TPT1P13693 172 aaKnown RBP13.48□□□□□ -0.25
HPS1-202ENST00000338546 SNTB1Q13884 538 aaKnown RBP13.48□□□□□ -0.25
HPS1-202ENST00000338546 C17orf58Q2M2W7 97 aa13.48□□□□□ -0.25
HPS1-202ENST00000338546 FAM219AQ8IW50 185 aa13.48□□□□□ -0.25
HPS1-202ENST00000338546 CD300LFQ8TDQ1 290 aa13.48□□□□□ -0.25
HPS1-202ENST00000338546 CCL17Q92583 94 aa13.48□□□□□ -0.25
HPS1-202ENST00000338546 GPHA2Q96T91 129 aa13.48□□□□□ -0.25
HPS1-202ENST00000338546 SLC25A32Q9H2D1 315 aa13.48□□□□□ -0.25
HPS1-202ENST00000338546 GFOD1Q9NXC2 390 aa13.48□□□□□ -0.25
HPS1-202ENST00000338546 LAMP3Q9UQV4 416 aa13.48□□□□□ -0.25
HPS1-202ENST00000338546 AUP1Q9Y679 476 aa13.48□□□□□ -0.25
HPS1-202ENST00000338546 LINC00312Q9Y6C7 94 aa13.48□□□□□ -0.25
HPS1-202ENST00000338546 HCFC1P51610 2035 aa13.47□□□□□ -0.25
HPS1-202ENST00000338546 IGHV1-69-2A0A0G2JMI3 117 aa13.47□□□□□ -0.25
HPS1-202ENST00000338546 MSGN1A6NI15 193 aa13.47□□□□□ -0.25
HPS1-202ENST00000338546 GPR137BO60478 399 aa13.47□□□□□ -0.25
HPS1-202ENST00000338546 SPDEFO95238 335 aa13.47□□□□□ -0.25
HPS1-202ENST00000338546 ZNF585BQ52M93 769 aa13.47□□□□□ -0.25
HPS1-202ENST00000338546 FOXRED2Q8IWF2 684 aa13.47□□□□□ -0.25
HPS1-202ENST00000338546 FAM216BQ8N7L0 139 aa13.47□□□□□ -0.25
HPS1-202ENST00000338546 CYTL1Q9NRR1 136 aa13.47□□□□□ -0.25
HPS1-202ENST00000338546 MED9Q9NWA0 146 aa13.47□□□□□ -0.25
HPS1-202ENST00000338546 DCAF16Q9NXF7 216 aa13.47□□□□□ -0.25
HPS1-202ENST00000338546 COA4Q9NYJ1 87 aa13.47□□□□□ -0.25
HPS1-202ENST00000338546 SLC25A10Q9UBX3 287 aaPredicted RBP13.47□□□□□ -0.25
HPS1-202ENST00000338546 RNF150Q9ULK6 438 aa13.47□□□□□ -0.25
HPS1-202ENST00000338546 DSCAML1Q8TD84 2053 aa13.47□□□□□ -0.25
HPS1-202ENST00000338546 ARFGEF3Q5TH69 2177 aa13.46□□□□□ -0.25
HPS1-202ENST00000338546 TMPRSS2O15393 492 aa13.46□□□□□ -0.25
HPS1-202ENST00000338546 GAPDHP04406 335 aaKnown RBP13.46□□□□□ -0.25
HPS1-202ENST00000338546 SELLP14151 372 aa13.46□□□□□ -0.25
HPS1-202ENST00000338546 HFEQ30201 348 aa13.46□□□□□ -0.25
HPS1-202ENST00000338546 TGIF2LYQ8IUE0 185 aa13.46□□□□□ -0.25
HPS1-202ENST00000338546 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.46□□□□□ -0.25
HPS1-202ENST00000338546 LRRC20Q8TCA0 184 aa13.46□□□□□ -0.25
HPS1-202ENST00000338546 C11orf1Q9H5F2 150 aa13.46□□□□□ -0.25
HPS1-202ENST00000338546 ZC4H2Q9NQZ6 224 aa13.46□□□□□ -0.25
HPS1-202ENST00000338546 SDHAF2Q9NX18 166 aa13.46□□□□□ -0.25
HPS1-202ENST00000338546 ROS1P08922 2347 aa13.46□□□□□ -0.25
HPS1-202ENST00000338546 DIDO1Q9BTC0 2240 aaKnown RBP13.46□□□□□ -0.26
HPS1-202ENST00000338546 IGHV3-43A0A0B4J1X8 118 aa13.45□□□□□ -0.26
HPS1-202ENST00000338546 A0A1B0GW55 424 aa13.45□□□□□ -0.26
HPS1-202ENST00000338546 CLDN1O95832 211 aa13.45□□□□□ -0.26
HPS1-202ENST00000338546 IGKV1-39P01597 117 aa13.45□□□□□ -0.26
HPS1-202ENST00000338546 IGKV1D-39P04432 117 aa13.45□□□□□ -0.26
HPS1-202ENST00000338546 DUX4L2P0CJ85 424 aa13.45□□□□□ -0.26
HPS1-202ENST00000338546 DUX4L3P0CJ86 424 aa13.45□□□□□ -0.26
HPS1-202ENST00000338546 DUX4L4P0CJ87 422 aa13.45□□□□□ -0.26
HPS1-202ENST00000338546 DUX4L5P0CJ88 424 aa13.45□□□□□ -0.26
HPS1-202ENST00000338546 DUX4L6P0CJ89 424 aa13.45□□□□□ -0.26
HPS1-202ENST00000338546 DUX4L7P0CJ90 424 aa13.45□□□□□ -0.26
HPS1-202ENST00000338546 IGHV3-43DP0DP04 118 aa13.45□□□□□ -0.26
HPS1-202ENST00000338546 GPR12P47775 334 aa13.45□□□□□ -0.26
HPS1-202ENST00000338546 Q3ZCU0 254 aa13.45□□□□□ -0.26
HPS1-202ENST00000338546 LRRC10Q5BKY1 277 aa13.45□□□□□ -0.26
HPS1-202ENST00000338546 ALKAL2Q6UX46 152 aa13.45□□□□□ -0.26
HPS1-202ENST00000338546 BAP18Q8IXM2 172 aa13.45□□□□□ -0.26
HPS1-202ENST00000338546 DMBX1Q8NFW5 382 aa13.45□□□□□ -0.26
HPS1-202ENST00000338546 GPR146Q96CH1 333 aa13.45□□□□□ -0.26
HPS1-202ENST00000338546 GAL3ST2Q9H3Q3 398 aa13.45□□□□□ -0.26
HPS1-202ENST00000338546 IDI2-AS1Q9NZ38 188 aa13.45□□□□□ -0.26
HPS1-202ENST00000338546 DUX4Q9UBX2 424 aa13.45□□□□□ -0.26
HPS1-202ENST00000338546 PSG11Q9UQ72 335 aa13.45□□□□□ -0.26
HPS1-202ENST00000338546 RCL1Q9Y2P8 373 aaKnown RBP13.45□□□□□ -0.26
HPS1-202ENST00000338546 PKD1L2Q7Z442 2459 aa13.45□□□□□ -0.26
HPS1-202ENST00000338546 COL6A6A6NMZ7 2263 aa13.45□□□□□ -0.26
HPS1-202ENST00000338546 NDUFB3O43676 98 aa13.45□□□□□ -0.26
HPS1-202ENST00000338546 JTBO76095 146 aa13.45□□□□□ -0.26
HPS1-202ENST00000338546 ZNF16P17020 682 aaPredicted RBP13.45□□□□□ -0.26
HPS1-202ENST00000338546 MRPS11P82912 194 aaKnown RBP13.45□□□□□ -0.26
HPS1-202ENST00000338546 EIF5AL1Q6IS14 154 aaKnown RBP13.45□□□□□ -0.26
HPS1-202ENST00000338546 RNASE11Q8TAA1 199 aaKnown RBP13.45□□□□□ -0.26
HPS1-202ENST00000338546 ITLN2Q8WWU7 325 aaPredicted RBP13.45□□□□□ -0.26
HPS1-202ENST00000338546 C5orf30Q96GV9 206 aa13.45□□□□□ -0.26
HPS1-202ENST00000338546 CBLN4Q9NTU7 201 aa13.45□□□□□ -0.26
HPS1-202ENST00000338546 MMP24Q9Y5R2 645 aa13.45□□□□□ -0.26
HPS1-202ENST00000338546 RAI1Q7Z5J4 1906 aaPredicted RBP13.44□□□□□ -0.26
HPS1-202ENST00000338546 FAM90A26D6RGX4 464 aa13.44□□□□□ -0.26
HPS1-202ENST00000338546 ST8SIA5O15466 376 aa13.44□□□□□ -0.26
HPS1-202ENST00000338546 RBFOX2O43251 390 aaKnown RBP eCLIP13.44□□□□□ -0.26
HPS1-202ENST00000338546 KCNAB3O43448 404 aa13.44□□□□□ -0.26
HPS1-202ENST00000338546 NMBP08949 121 aa13.44□□□□□ -0.26
HPS1-202ENST00000338546 NDUFB7P17568 137 aa13.44□□□□□ -0.26
HPS1-202ENST00000338546 LPAR6P43657 344 aa13.44□□□□□ -0.26
HPS1-202ENST00000338546 ARHGDIBP52566 201 aa13.44□□□□□ -0.26
HPS1-202ENST00000338546 DUX4L9Q6RFH8 374 aaPredicted RBP13.44□□□□□ -0.26
HPS1-202ENST00000338546 TCF23Q7RTU1 214 aa13.44□□□□□ -0.26
HPS1-202ENST00000338546 SLC25A31Q9H0C2 315 aa13.44□□□□□ -0.26
HPS1-202ENST00000338546 RAB1BQ9H0U4 201 aa13.44□□□□□ -0.26
HPS1-202ENST00000338546 TPRP12270 2363 aaKnown RBP13.44□□□□□ -0.26
HPS1-202ENST00000338546 ZZEF1O43149 2961 aa13.44□□□□□ -0.26
HPS1-202ENST00000338546 NBASA2RRP1 2371 aa13.43□□□□□ -0.26
HPS1-202ENST00000338546 IGKV1-5P01602 117 aa13.43□□□□□ -0.26
HPS1-202ENST00000338546 RRASP10301 218 aa13.43□□□□□ -0.26
HPS1-202ENST00000338546 GNLYP22749 145 aa13.43□□□□□ -0.26
HPS1-202ENST00000338546 KIR2DS2P43631 304 aa13.43□□□□□ -0.26
HPS1-202ENST00000338546 AKR1C2P52895 323 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms