RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 KANTRA0A1W2PQU2 76 aa9.86□□□□□ -0.83
TRIM40-205ENST00000307859 TMEM178BH3BS89 294 aa9.86□□□□□ -0.83
TRIM40-205ENST00000307859 F2RL2O00254 374 aa9.86□□□□□ -0.83
TRIM40-205ENST00000307859 DEDDO75618 318 aa9.86□□□□□ -0.83
TRIM40-205ENST00000307859 GYPAP02724 150 aa9.86□□□□□ -0.83
TRIM40-205ENST00000307859 DUX4L2P0CJ85 424 aa9.86□□□□□ -0.83
TRIM40-205ENST00000307859 DUX4L3P0CJ86 424 aa9.86□□□□□ -0.83
TRIM40-205ENST00000307859 DUX4L4P0CJ87 422 aa9.86□□□□□ -0.83
TRIM40-205ENST00000307859 DUX4L5P0CJ88 424 aa9.86□□□□□ -0.83
TRIM40-205ENST00000307859 DUX4L6P0CJ89 424 aa9.86□□□□□ -0.83
TRIM40-205ENST00000307859 DUX4L7P0CJ90 424 aa9.86□□□□□ -0.83
TRIM40-205ENST00000307859 S100A10P60903 97 aa9.86□□□□□ -0.83
TRIM40-205ENST00000307859 EIF4EBP1Q13541 118 aaPredicted RBP9.86□□□□□ -0.83
TRIM40-205ENST00000307859 ZNF672Q499Z4 452 aaPredicted RBP9.86□□□□□ -0.83
TRIM40-205ENST00000307859 NMSQ5H8A3 153 aa9.86□□□□□ -0.83
TRIM40-205ENST00000307859 FAM53AQ6NSI3 398 aaPredicted RBP9.86□□□□□ -0.83
TRIM40-205ENST00000307859 DUX4L9Q6RFH8 374 aaPredicted RBP9.86□□□□□ -0.83
TRIM40-205ENST00000307859 SPNS3Q6ZMD2 512 aa9.86□□□□□ -0.83
TRIM40-205ENST00000307859 ZNF808Q8N4W9 903 aaPredicted RBP9.86□□□□□ -0.83
TRIM40-205ENST00000307859 DEFB108BQ8NET1 73 aa9.86□□□□□ -0.83
TRIM40-205ENST00000307859 NINJ1Q92982 152 aa9.86□□□□□ -0.83
TRIM40-205ENST00000307859 AQP10Q96PS8 301 aa9.86□□□□□ -0.83
TRIM40-205ENST00000307859 OR2S2Q9NQN1 319 aa9.86□□□□□ -0.83
TRIM40-205ENST00000307859 TMEM106BQ9NUM4 274 aa9.86□□□□□ -0.83
TRIM40-205ENST00000307859 DUX4Q9UBX2 424 aa9.86□□□□□ -0.83
TRIM40-205ENST00000307859 RPS10-NUDT3A0A1W2PQS6 291 aa9.85□□□□□ -0.83
TRIM40-205ENST00000307859 NKX6-3A6NJ46 265 aa9.85□□□□□ -0.83
TRIM40-205ENST00000307859 K7EPK0 472 aa9.85□□□□□ -0.83
TRIM40-205ENST00000307859 MBPP02686 304 aaPredicted RBP9.85□□□□□ -0.83
TRIM40-205ENST00000307859 VDAC1P21796 283 aa9.85□□□□□ -0.83
TRIM40-205ENST00000307859 PPP1CCP36873 323 aaKnown RBP9.85□□□□□ -0.83
TRIM40-205ENST00000307859 EDDM3BP56851 147 aa9.85□□□□□ -0.83
TRIM40-205ENST00000307859 UBA52P62987 128 aaKnown RBP9.85□□□□□ -0.83
TRIM40-205ENST00000307859 FAM219AQ8IW50 185 aa9.85□□□□□ -0.83
TRIM40-205ENST00000307859 FAM71E2Q8N5Q1 922 aa9.85□□□□□ -0.83
TRIM40-205ENST00000307859 FAM216BQ8N7L0 139 aa9.85□□□□□ -0.83
TRIM40-205ENST00000307859 OR4D5Q8NGN0 318 aa9.85□□□□□ -0.83
TRIM40-205ENST00000307859 OR51H1Q8NH63 302 aa9.85□□□□□ -0.83
TRIM40-205ENST00000307859 C5orf30Q96GV9 206 aa9.85□□□□□ -0.83
TRIM40-205ENST00000307859 CCL13Q99616 98 aa9.85□□□□□ -0.83
TRIM40-205ENST00000307859 SPIN2AQ99865 258 aa9.85□□□□□ -0.83
TRIM40-205ENST00000307859 SPIN2BQ9BPZ2 258 aa9.85□□□□□ -0.83
TRIM40-205ENST00000307859 OR2D2Q9H210 308 aa9.85□□□□□ -0.83
TRIM40-205ENST00000307859 ZFP57Q9NU63 452 aa9.85□□□□□ -0.83
TRIM40-205ENST00000307859 LIN7CQ9NUP9 197 aaKnown RBP9.85□□□□□ -0.83
TRIM40-205ENST00000307859 ABCA4P78363 2273 aa9.85□□□□□ -0.83
TRIM40-205ENST00000307859 CRYBG3Q68DQ2 2970 aa9.85□□□□□ -0.83
TRIM40-205ENST00000307859 MSGN1A6NI15 193 aa9.85□□□□□ -0.83
TRIM40-205ENST00000307859 RNF212BA8MTL3 300 aa9.85□□□□□ -0.83
TRIM40-205ENST00000307859 TNFRSF13BO14836 293 aaPredicted RBP9.85□□□□□ -0.83
TRIM40-205ENST00000307859 YPEL1O60688 119 aa9.85□□□□□ -0.83
TRIM40-205ENST00000307859 AGAP20933 346 aa9.85□□□□□ -0.83
TRIM40-205ENST00000307859 LOXL3P58215 753 aa9.85□□□□□ -0.83
TRIM40-205ENST00000307859 TCF23Q7RTU1 214 aa9.85□□□□□ -0.83
TRIM40-205ENST00000307859 MUC15Q8N387 334 aa9.85□□□□□ -0.83
TRIM40-205ENST00000307859 OR52M1Q8NGK5 317 aa9.85□□□□□ -0.83
TRIM40-205ENST00000307859 RFESDQ8TAC1 157 aa9.85□□□□□ -0.83
TRIM40-205ENST00000307859 YPEL2Q96QA6 119 aa9.85□□□□□ -0.83
TRIM40-205ENST00000307859 ARPC5LQ9BPX5 153 aa9.85□□□□□ -0.83
TRIM40-205ENST00000307859 RAB9BQ9NP90 201 aa9.85□□□□□ -0.83
TRIM40-205ENST00000307859 CALYQ9NYX4 217 aa9.85□□□□□ -0.83
TRIM40-205ENST00000307859 PPIAL4EA0A075B759 164 aa9.84□□□□□ -0.83
TRIM40-205ENST00000307859 IGHV3-43A0A0B4J1X8 118 aa9.84□□□□□ -0.83
TRIM40-205ENST00000307859 PPIAL4DF5H284 164 aa9.84□□□□□ -0.83
TRIM40-205ENST00000307859 KCNAB3O43448 404 aa9.84□□□□□ -0.83
TRIM40-205ENST00000307859 RLN2P04090 185 aa9.84□□□□□ -0.83
TRIM40-205ENST00000307859 SERPINE2P07093 398 aa9.84□□□□□ -0.83
TRIM40-205ENST00000307859 PPIAL4FP0DN26 164 aa9.84□□□□□ -0.83
TRIM40-205ENST00000307859 IGHV3-43DP0DP04 118 aa9.84□□□□□ -0.83
TRIM40-205ENST00000307859 NUP62P37198 522 aaPredicted RBP9.84□□□□□ -0.83
TRIM40-205ENST00000307859 SMCO1Q147U7 214 aa9.84□□□□□ -0.83
TRIM40-205ENST00000307859 C17orf58Q2M2W7 97 aa9.84□□□□□ -0.83
TRIM40-205ENST00000307859 CLLU1Q5K131 121 aa9.84□□□□□ -0.83
TRIM40-205ENST00000307859 SP5Q6BEB4 398 aaPredicted RBP9.84□□□□□ -0.83
TRIM40-205ENST00000307859 SCARB1Q8WTV0 552 aa9.84□□□□□ -0.83
TRIM40-205ENST00000307859 ITLN2Q8WWU7 325 aaPredicted RBP9.84□□□□□ -0.83
TRIM40-205ENST00000307859 EDARADDQ8WWZ3 215 aa9.84□□□□□ -0.83
TRIM40-205ENST00000307859 ST8SIA2Q92186 375 aa9.84□□□□□ -0.83
TRIM40-205ENST00000307859 CORO2AQ92828 525 aa9.84□□□□□ -0.83
TRIM40-205ENST00000307859 ABHD14BQ96IU4 210 aa9.84□□□□□ -0.83
TRIM40-205ENST00000307859 AGMATQ9BSE5 352 aa9.84□□□□□ -0.83
TRIM40-205ENST00000307859 PLEKHF2Q9H8W4 249 aa9.84□□□□□ -0.83
TRIM40-205ENST00000307859 LINC00574Q9H8X3 128 aa9.84□□□□□ -0.83
TRIM40-205ENST00000307859 LSM5Q9Y4Y9 91 aaKnown RBP9.84□□□□□ -0.83
TRIM40-205ENST00000307859 PPIAL4AQ9Y536 164 aa9.84□□□□□ -0.83
TRIM40-205ENST00000307859 POMT1Q9Y6A1 747 aa9.84□□□□□ -0.83
TRIM40-205ENST00000307859 SPG11Q96JI7 2443 aa9.83□□□□□ -0.84
TRIM40-205ENST00000307859 TRGV10A0A0A0MS01 117 aa9.83□□□□□ -0.84
TRIM40-205ENST00000307859 KBTBD11-OT1A0A1B0GTJ5 212 aa9.83□□□□□ -0.84
TRIM40-205ENST00000307859 MEX3AA1L020 520 aaKnown RBP9.83□□□□□ -0.84
TRIM40-205ENST00000307859 ITGB1BP1O14713 200 aa9.83□□□□□ -0.84
TRIM40-205ENST00000307859 ST8SIA3O43173 380 aa9.83□□□□□ -0.84
TRIM40-205ENST00000307859 ADAM20O43506 726 aa9.83□□□□□ -0.84
TRIM40-205ENST00000307859 CLDN14O95500 239 aa9.83□□□□□ -0.84
TRIM40-205ENST00000307859 SCGB1D2O95969 90 aa9.83□□□□□ -0.84
TRIM40-205ENST00000307859 IGKV1-39P01597 117 aa9.83□□□□□ -0.84
TRIM40-205ENST00000307859 IGKV1D-39P04432 117 aa9.83□□□□□ -0.84
TRIM40-205ENST00000307859 HKR1P10072 659 aa9.83□□□□□ -0.84
TRIM40-205ENST00000307859 SLC25A6P12236 298 aa9.83□□□□□ -0.84
TRIM40-205ENST00000307859 PPOXP50336 477 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms