RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 MRGPRX3Q96LB0 322 aa10.98□□□□□ -0.65
USP38-201ENST00000307017 PGLYRP3Q96LB9 341 aa10.98□□□□□ -0.65
USP38-201ENST00000307017 ZNF256Q9Y2P7 627 aaPredicted RBP10.98□□□□□ -0.65
USP38-201ENST00000307017 SLC25A17O43808 307 aa10.98□□□□□ -0.65
USP38-201ENST00000307017 RRN3P1Q2M238 152 aa10.98□□□□□ -0.65
USP38-201ENST00000307017 RASL10BQ96S79 203 aa10.98□□□□□ -0.65
USP38-201ENST00000307017 TMEM229AB2RXF0 380 aa10.98□□□□□ -0.65
USP38-201ENST00000307017 B4E171 279 aa10.98□□□□□ -0.65
USP38-201ENST00000307017 ISLRO14498 428 aa10.98□□□□□ -0.65
USP38-201ENST00000307017 PRSS53Q2L4Q9 553 aa10.98□□□□□ -0.65
USP38-201ENST00000307017 IBA57Q5T440 356 aaKnown RBP10.98□□□□□ -0.65
USP38-201ENST00000307017 ATP1A1-AS1Q5TC04 95 aa10.98□□□□□ -0.65
USP38-201ENST00000307017 TEPPQ6URK8 271 aa10.98□□□□□ -0.65
USP38-201ENST00000307017 MARVELD3Q96A59 401 aa10.98□□□□□ -0.65
USP38-201ENST00000307017 PMCHL2Q9BQD1 86 aa10.98□□□□□ -0.65
USP38-201ENST00000307017 TMEM167BQ9NRX6 74 aa10.98□□□□□ -0.65
USP38-201ENST00000307017 HIGD1AQ9Y241 93 aa10.98□□□□□ -0.65
USP38-201ENST00000307017 SPAARA0A1B0GVQ0 90 aa10.97□□□□□ -0.65
USP38-201ENST00000307017 UPK3AO75631 287 aa10.97□□□□□ -0.65
USP38-201ENST00000307017 SRIP30626 198 aa10.97□□□□□ -0.65
USP38-201ENST00000307017 KIR3DL2P43630 455 aa10.97□□□□□ -0.65
USP38-201ENST00000307017 RELQ04864 619 aaPredicted RBP10.97□□□□□ -0.65
USP38-201ENST00000307017 RNPS1Q15287 305 aaKnown RBP10.97□□□□□ -0.65
USP38-201ENST00000307017 C11orf68Q9H3H3 251 aaKnown RBP10.97□□□□□ -0.65
USP38-201ENST00000307017 SLC25A10Q9UBX3 287 aaPredicted RBP10.97□□□□□ -0.65
USP38-201ENST00000307017 SPINT1O43278 529 aa10.97□□□□□ -0.65
USP38-201ENST00000307017 SYNGR1O43759 233 aa10.97□□□□□ -0.65
USP38-201ENST00000307017 PEBP1P30086 187 aaKnown RBP10.97□□□□□ -0.65
USP38-201ENST00000307017 KIR2DS2P43631 304 aa10.97□□□□□ -0.65
USP38-201ENST00000307017 DLX6P56179 175 aa10.97□□□□□ -0.65
USP38-201ENST00000307017 OR2Y1Q8NGV0 311 aa10.97□□□□□ -0.65
USP38-201ENST00000307017 KNTC1P50748 2209 aa10.97□□□□□ -0.65
USP38-201ENST00000307017 PPP1R17O96001 155 aa10.97□□□□□ -0.65
USP38-201ENST00000307017 PMS2CLQ68D20 193 aa10.97□□□□□ -0.65
USP38-201ENST00000307017 Q8WTZ3 238 aa10.97□□□□□ -0.65
USP38-201ENST00000307017 ZFP30Q9Y2G7 519 aa10.97□□□□□ -0.65
USP38-201ENST00000307017 TFF1P04155 84 aa10.97□□□□□ -0.65
USP38-201ENST00000307017 CCR5P51681 352 aa10.97□□□□□ -0.65
USP38-201ENST00000307017 GRAMD2BQ96HH9 432 aa10.97□□□□□ -0.65
USP38-201ENST00000307017 RNF122Q9H9V4 155 aa10.97□□□□□ -0.65
USP38-201ENST00000307017 BRWD1Q9NSI6 2320 aa10.97□□□□□ -0.65
USP38-201ENST00000307017 TNRC6CQ9HCJ0 1690 aaKnown RBP10.97□□□□□ -0.65
USP38-201ENST00000307017 HTN3P15516 51 aa10.97□□□□□ -0.65
USP38-201ENST00000307017 PLPPR5Q32ZL2 321 aa10.97□□□□□ -0.65
USP38-201ENST00000307017 PERPQ96FX8 193 aa10.97□□□□□ -0.65
USP38-201ENST00000307017 CEACAM18A8MTB9 384 aa10.96□□□□□ -0.65
USP38-201ENST00000307017 KIR3DL3Q8N743 410 aa10.96□□□□□ -0.65
USP38-201ENST00000307017 SPSB2Q99619 263 aa10.96□□□□□ -0.65
USP38-201ENST00000307017 PGPA6NDG6 321 aa10.96□□□□□ -0.65
USP38-201ENST00000307017 LIPT2A6NK58 231 aa10.96□□□□□ -0.65
USP38-201ENST00000307017 FOXA3P55318 350 aaPredicted RBP10.96□□□□□ -0.65
USP38-201ENST00000307017 NPC2P61916 151 aa10.96□□□□□ -0.65
USP38-201ENST00000307017 Q8IYB0 196 aa10.96□□□□□ -0.65
USP38-201ENST00000307017 OR1P1Q8NH06 330 aa10.96□□□□□ -0.65
USP38-201ENST00000307017 RNF133Q8WVZ7 376 aa10.96□□□□□ -0.65
USP38-201ENST00000307017 AMMECR1Q9Y4X0 333 aaPredicted RBP10.96□□□□□ -0.65
USP38-201ENST00000307017 NXPH1P58417 271 aa10.96□□□□□ -0.66
USP38-201ENST00000307017 DDA1Q9BW61 102 aa10.96□□□□□ -0.66
USP38-201ENST00000307017 ANGPTL4Q9BY76 406 aa10.96□□□□□ -0.66
USP38-201ENST00000307017 TRAV8-6A0A0B4J262 113 aa10.96□□□□□ -0.66
USP38-201ENST00000307017 IGHV1OR15-9A0A0B4J2B8 117 aa10.96□□□□□ -0.66
USP38-201ENST00000307017 MOSP00540 346 aa10.96□□□□□ -0.66
USP38-201ENST00000307017 GP1BAP07359 652 aa10.96□□□□□ -0.66
USP38-201ENST00000307017 DRD3P35462 400 aa10.96□□□□□ -0.66
USP38-201ENST00000307017 C19orf54Q5BKX5 351 aa10.96□□□□□ -0.66
USP38-201ENST00000307017 TLNRD1Q9H1K6 362 aa10.96□□□□□ -0.66
USP38-201ENST00000307017 METTL1Q9UBP6 276 aaKnown RBP10.96□□□□□ -0.66
USP38-201ENST00000307017 C9JCJ5 164 aa10.96□□□□□ -0.66
USP38-201ENST00000307017 SLC17A3O00476 420 aa10.96□□□□□ -0.66
USP38-201ENST00000307017 PDE6DO43924 150 aa10.96□□□□□ -0.66
USP38-201ENST00000307017 NDUFA3O95167 84 aa10.96□□□□□ -0.66
USP38-201ENST00000307017 CRYBB3P26998 211 aa10.96□□□□□ -0.66
USP38-201ENST00000307017 ZIC1Q15915 447 aa10.96□□□□□ -0.66
USP38-201ENST00000307017 FAM53AQ6NSI3 398 aaPredicted RBP10.96□□□□□ -0.66
USP38-201ENST00000307017 FAM19A2Q8N3H0 131 aa10.96□□□□□ -0.66
USP38-201ENST00000307017 GPR35Q9HC97 309 aa10.96□□□□□ -0.66
USP38-201ENST00000307017 NRXN3Q9Y4C0 1643 aa10.95□□□□□ -0.66
USP38-201ENST00000307017 HSPB2A8KAH6 182 aa10.95□□□□□ -0.66
USP38-201ENST00000307017 ZNF735P0CB33 412 aa10.95□□□□□ -0.66
USP38-201ENST00000307017 HSPB2Q16082 182 aa10.95□□□□□ -0.66
USP38-201ENST00000307017 C9orf40Q8IXQ3 194 aa10.95□□□□□ -0.66
USP38-201ENST00000307017 GHITMQ9H3K2 345 aa10.95□□□□□ -0.66
USP38-201ENST00000307017 ST6GALNAC2Q9UJ37 374 aa10.95□□□□□ -0.66
USP38-201ENST00000307017 CBLN1P23435 193 aa10.95□□□□□ -0.66
USP38-201ENST00000307017 MFAP4P55083 255 aa10.95□□□□□ -0.66
USP38-201ENST00000307017 ARF6P62330 175 aa10.95□□□□□ -0.66
USP38-201ENST00000307017 SRSF12Q8WXF0 261 aaKnown RBP10.95□□□□□ -0.66
USP38-201ENST00000307017 RAB1BQ9H0U4 201 aa10.95□□□□□ -0.66
USP38-201ENST00000307017 OR2W1Q9Y3N9 320 aa10.95□□□□□ -0.66
USP38-201ENST00000307017 DEDDO75618 318 aa10.95□□□□□ -0.66
USP38-201ENST00000307017 HKR1P10072 659 aa10.95□□□□□ -0.66
USP38-201ENST00000307017 PF4V1P10720 104 aa10.95□□□□□ -0.66
USP38-201ENST00000307017 ABHD12Q8N2K0 398 aa10.95□□□□□ -0.66
USP38-201ENST00000307017 OR11H4Q8NGC9 324 aa10.95□□□□□ -0.66
USP38-201ENST00000307017 OGG1O15527 345 aa10.95□□□□□ -0.66
USP38-201ENST00000307017 MESP2Q0VG99 397 aa10.95□□□□□ -0.66
USP38-201ENST00000307017 TRIP6Q15654 476 aaKnown RBP10.95□□□□□ -0.66
USP38-201ENST00000307017 ATG4DQ86TL0 474 aaPredicted RBP10.95□□□□□ -0.66
USP38-201ENST00000307017 PROB1E7EW31 1015 aa10.95□□□□□ -0.66
USP38-201ENST00000307017 ZG16O60844 167 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms