RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 HBG1P69891 147 aa7.08□□□□□ -1.28
PTPDC1-201ENST00000288976 HBG2P69892 147 aa7.08□□□□□ -1.28
PTPDC1-201ENST00000288976 ZNF146Q15072 292 aa7.08□□□□□ -1.28
PTPDC1-201ENST00000288976 TNXAQ16473 311 aa7.08□□□□□ -1.28
PTPDC1-201ENST00000288976 PNLIPRP3Q17RR3 467 aa7.08□□□□□ -1.28
PTPDC1-201ENST00000288976 STEAP1BQ6NZ63 245 aa7.08□□□□□ -1.28
PTPDC1-201ENST00000288976 MFSD4AQ8N468 514 aa7.08□□□□□ -1.28
PTPDC1-201ENST00000288976 FAM71E2Q8N5Q1 922 aa7.08□□□□□ -1.28
PTPDC1-201ENST00000288976 AUP1Q9Y679 476 aa7.08□□□□□ -1.28
PTPDC1-201ENST00000288976 OR5H8P0DN80 308 aa7.08□□□□□ -1.28
PTPDC1-201ENST00000288976 TNFSF8P32971 234 aa7.08□□□□□ -1.28
PTPDC1-201ENST00000288976 FLI1Q01543 452 aaPredicted RBP7.08□□□□□ -1.28
PTPDC1-201ENST00000288976 ITLN1Q8WWA0 313 aa7.08□□□□□ -1.28
PTPDC1-201ENST00000288976 PECRQ9BY49 303 aa7.08□□□□□ -1.28
PTPDC1-201ENST00000288976 DLL4Q9NR61 685 aa7.08□□□□□ -1.28
PTPDC1-201ENST00000288976 SULT1C2O00338 296 aa7.08□□□□□ -1.28
PTPDC1-201ENST00000288976 GDNFP39905 211 aa7.08□□□□□ -1.28
PTPDC1-201ENST00000288976 LGALS7P47929 136 aa7.08□□□□□ -1.28
PTPDC1-201ENST00000288976 TAS2R31P59538 309 aa7.08□□□□□ -1.28
PTPDC1-201ENST00000288976 UBE2G2P60604 165 aa7.08□□□□□ -1.28
PTPDC1-201ENST00000288976 ZNF260Q3ZCT1 412 aa7.08□□□□□ -1.28
PTPDC1-201ENST00000288976 LPCAT3Q6P1A2 487 aa7.08□□□□□ -1.28
PTPDC1-201ENST00000288976 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.08□□□□□ -1.28
PTPDC1-201ENST00000288976 ZNF788Q6ZQV5 615 aa7.08□□□□□ -1.28
PTPDC1-201ENST00000288976 DNM1P46Q6ZS02 220 aa7.08□□□□□ -1.28
PTPDC1-201ENST00000288976 RNF144BQ7Z419 303 aa7.08□□□□□ -1.28
PTPDC1-201ENST00000288976 C1QL2Q7Z5L3 287 aa7.08□□□□□ -1.28
PTPDC1-201ENST00000288976 NOXA1Q86UR1 476 aa7.08□□□□□ -1.28
PTPDC1-201ENST00000288976 FAM58AQ8N1B3 248 aa7.08□□□□□ -1.28
PTPDC1-201ENST00000288976 GAL3ST2Q9H3Q3 398 aa7.08□□□□□ -1.28
PTPDC1-201ENST00000288976 SCPEP1Q9HB40 452 aa7.08□□□□□ -1.28
PTPDC1-201ENST00000288976 OR1A1Q9P1Q5 309 aa7.08□□□□□ -1.28
PTPDC1-201ENST00000288976 A0A0B4J2A0 478 aa7.08□□□□□ -1.28
PTPDC1-201ENST00000288976 F5H697 171 aa7.08□□□□□ -1.28
PTPDC1-201ENST00000288976 KCNAB3O43448 404 aa7.08□□□□□ -1.28
PTPDC1-201ENST00000288976 FABP1P07148 127 aa7.08□□□□□ -1.28
PTPDC1-201ENST00000288976 MDH2P40926 338 aaKnown RBP7.08□□□□□ -1.28
PTPDC1-201ENST00000288976 PRRX1P54821 245 aa7.08□□□□□ -1.28
PTPDC1-201ENST00000288976 ACP7Q6ZNF0 438 aa7.08□□□□□ -1.28
PTPDC1-201ENST00000288976 SPICQ8N5J4 248 aa7.08□□□□□ -1.28
PTPDC1-201ENST00000288976 OR10R2Q8NGX6 335 aa7.08□□□□□ -1.28
PTPDC1-201ENST00000288976 DEDD2Q8WXF8 326 aa7.08□□□□□ -1.28
PTPDC1-201ENST00000288976 CORO2AQ92828 525 aa7.08□□□□□ -1.28
PTPDC1-201ENST00000288976 ARPC5LQ9BPX5 153 aa7.08□□□□□ -1.28
PTPDC1-201ENST00000288976 ABHD14AQ9BUJ0 271 aa7.08□□□□□ -1.28
PTPDC1-201ENST00000288976 SLC25A31Q9H0C2 315 aa7.08□□□□□ -1.28
PTPDC1-201ENST00000288976 SHPKQ9UHJ6 478 aa7.08□□□□□ -1.28
PTPDC1-201ENST00000288976 A0A1W2PPR1 153 aa7.07□□□□□ -1.28
PTPDC1-201ENST00000288976 SYNGR1O43759 233 aa7.07□□□□□ -1.28
PTPDC1-201ENST00000288976 KALRNO60229 2985 aa7.07□□□□□ -1.28
PTPDC1-201ENST00000288976 USF2Q15853 346 aaPredicted RBP7.07□□□□□ -1.28
PTPDC1-201ENST00000288976 SRSF7Q16629 238 aaKnown RBP eCLIP7.07□□□□□ -1.28
PTPDC1-201ENST00000288976 DCAF12L2Q5VW00 463 aa7.07□□□□□ -1.28
PTPDC1-201ENST00000288976 GDPD1Q8N9F7 314 aa7.07□□□□□ -1.28
PTPDC1-201ENST00000288976 CCL13Q99616 98 aa7.07□□□□□ -1.28
PTPDC1-201ENST00000288976 NECAP2Q9NVZ3 263 aa7.07□□□□□ -1.28
PTPDC1-201ENST00000288976 ZNF107Q9UII5 783 aaPredicted RBP7.07□□□□□ -1.28
PTPDC1-201ENST00000288976 MAB21L2Q9Y586 359 aa7.07□□□□□ -1.28
PTPDC1-201ENST00000288976 SIX6O95475 246 aa7.07□□□□□ -1.28
PTPDC1-201ENST00000288976 MELTFP08582 738 aa7.07□□□□□ -1.28
PTPDC1-201ENST00000288976 MUC1P15941 1255 aaPredicted RBP7.07□□□□□ -1.28
PTPDC1-201ENST00000288976 OPRK1P41145 380 aa7.07□□□□□ -1.28
PTPDC1-201ENST00000288976 KCNJ3P48549 501 aa7.07□□□□□ -1.28
PTPDC1-201ENST00000288976 HOXA4Q00056 320 aaPredicted RBP7.07□□□□□ -1.28
PTPDC1-201ENST00000288976 SP6Q3SY56 376 aa7.07□□□□□ -1.28
PTPDC1-201ENST00000288976 PXDC1Q5TGL8 231 aa7.07□□□□□ -1.28
PTPDC1-201ENST00000288976 PCNPQ8WW12 178 aaKnown RBP7.07□□□□□ -1.28
PTPDC1-201ENST00000288976 AP1S3Q96PC3 154 aa7.07□□□□□ -1.28
PTPDC1-201ENST00000288976 DCTN5Q9BTE1 182 aa7.07□□□□□ -1.28
PTPDC1-201ENST00000288976 DOK5Q9P104 306 aa7.07□□□□□ -1.28
PTPDC1-201ENST00000288976 CHD3Q12873 2000 aaKnown RBP7.07□□□□□ -1.28
PTPDC1-201ENST00000288976 NACAE9PAV3 2078 aa7.07□□□□□ -1.28
PTPDC1-201ENST00000288976 TMEM30CPA0ZSE6 113 aa7.07□□□□□ -1.28
PTPDC1-201ENST00000288976 SOD3P08294 240 aa7.07□□□□□ -1.28
PTPDC1-201ENST00000288976 LMO1P25800 156 aa7.07□□□□□ -1.28
PTPDC1-201ENST00000288976 ZNF546Q86UE3 836 aa7.07□□□□□ -1.28
PTPDC1-201ENST00000288976 OR56B4Q8NH76 319 aa7.07□□□□□ -1.28
PTPDC1-201ENST00000288976 NCOR1P1Q9H4R4 102 aa7.07□□□□□ -1.28
PTPDC1-201ENST00000288976 SMG1Q96Q15 3661 aaKnown RBP7.07□□□□□ -1.28
PTPDC1-201ENST00000288976 IGHV1-69-2A0A0G2JMI3 117 aa7.06□□□□□ -1.28
PTPDC1-201ENST00000288976 SERPINE3A8MV23 424 aa7.06□□□□□ -1.28
PTPDC1-201ENST00000288976 K7EQM0 130 aa7.06□□□□□ -1.28
PTPDC1-201ENST00000288976 CEACAM6P40199 344 aa7.06□□□□□ -1.28
PTPDC1-201ENST00000288976 EFNB2P52799 333 aa7.06□□□□□ -1.28
PTPDC1-201ENST00000288976 DEFB121Q5J5C9 76 aa7.06□□□□□ -1.28
PTPDC1-201ENST00000288976 TMEM268Q5VZI3 342 aa7.06□□□□□ -1.28
PTPDC1-201ENST00000288976 FAAP20Q6NZ36 180 aa7.06□□□□□ -1.28
PTPDC1-201ENST00000288976 LGI3Q8N145 548 aa7.06□□□□□ -1.28
PTPDC1-201ENST00000288976 ANAPC10Q9UM13 185 aa7.06□□□□□ -1.28
PTPDC1-201ENST00000288976 CACNG2Q9Y698 323 aa7.06□□□□□ -1.28
PTPDC1-201ENST00000288976 PPIAL4EA0A075B759 164 aa7.06□□□□□ -1.28
PTPDC1-201ENST00000288976 A0A0A6YYD4 124 aa7.06□□□□□ -1.28
PTPDC1-201ENST00000288976 PPIAL4DF5H284 164 aa7.06□□□□□ -1.28
PTPDC1-201ENST00000288976 F6UZH7 168 aa7.06□□□□□ -1.28
PTPDC1-201ENST00000288976 OR2J3O76001 311 aa7.06□□□□□ -1.28
PTPDC1-201ENST00000288976 F12P00748 615 aaPredicted RBP7.06□□□□□ -1.28
PTPDC1-201ENST00000288976 PPIAL4FP0DN26 164 aa7.06□□□□□ -1.28
PTPDC1-201ENST00000288976 CD80P33681 288 aa7.06□□□□□ -1.28
PTPDC1-201ENST00000288976 NKX2-1P43699 371 aaPredicted RBP7.06□□□□□ -1.28
PTPDC1-201ENST00000288976 EFNA4P52798 201 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms