RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 TXNL4BQ9NX01 149 aaKnown RBP11.35□□□□□ -0.59
HMGN3-201ENST00000275036 SLC23A1Q9UHI7 598 aa11.35□□□□□ -0.59
HMGN3-201ENST00000275036 RAB27BO00194 218 aa11.34□□□□□ -0.59
HMGN3-201ENST00000275036 PF4V1P10720 104 aa11.34□□□□□ -0.59
HMGN3-201ENST00000275036 SLC2A2P11168 524 aaPredicted RBP11.34□□□□□ -0.59
HMGN3-201ENST00000275036 ACTBP60709 375 aa11.34□□□□□ -0.59
HMGN3-201ENST00000275036 RPL23AP62750 156 aaKnown RBP11.34□□□□□ -0.59
HMGN3-201ENST00000275036 FOXB2Q5VYV0 432 aa11.34□□□□□ -0.59
HMGN3-201ENST00000275036 ZNF773Q6PK81 442 aa11.34□□□□□ -0.59
HMGN3-201ENST00000275036 FOXRED2Q8IWF2 684 aa11.34□□□□□ -0.59
HMGN3-201ENST00000275036 OR8H1Q8NGG4 311 aa11.34□□□□□ -0.59
HMGN3-201ENST00000275036 RASL11BQ9BPW5 248 aa11.34□□□□□ -0.59
HMGN3-201ENST00000275036 AURKAIP1Q9NWT8 199 aaPredicted RBP11.34□□□□□ -0.59
HMGN3-201ENST00000275036 AP4M1O00189 453 aa11.33□□□□□ -0.6
HMGN3-201ENST00000275036 MFNGO00587 321 aa11.33□□□□□ -0.6
HMGN3-201ENST00000275036 ITGB1BP1O14713 200 aa11.33□□□□□ -0.6
HMGN3-201ENST00000275036 PROP1O75360 226 aa11.33□□□□□ -0.6
HMGN3-201ENST00000275036 CT45A6P0DMU7 189 aa11.33□□□□□ -0.6
HMGN3-201ENST00000275036 CT45A5P0DMU8 189 aa11.33□□□□□ -0.6
HMGN3-201ENST00000275036 CT45A7P0DMV0 189 aa11.33□□□□□ -0.6
HMGN3-201ENST00000275036 GNB3P16520 340 aa11.33□□□□□ -0.6
HMGN3-201ENST00000275036 CD33P20138 364 aa11.33□□□□□ -0.6
HMGN3-201ENST00000275036 RAB6AP20340 208 aa11.33□□□□□ -0.6
HMGN3-201ENST00000275036 FGF9P31371 208 aaPredicted RBP11.33□□□□□ -0.6
HMGN3-201ENST00000275036 CEACAM6P40199 344 aa11.33□□□□□ -0.6
HMGN3-201ENST00000275036 MMDQ15546 238 aa11.33□□□□□ -0.6
HMGN3-201ENST00000275036 GLDNQ6ZMI3 551 aaPredicted RBP11.33□□□□□ -0.6
HMGN3-201ENST00000275036 LCNL1Q6ZST4 164 aa11.33□□□□□ -0.6
HMGN3-201ENST00000275036 OR10R2Q8NGX6 335 aa11.33□□□□□ -0.6
HMGN3-201ENST00000275036 FCGR1BQ92637 280 aa11.33□□□□□ -0.6
HMGN3-201ENST00000275036 RAB3CQ96E17 227 aa11.33□□□□□ -0.6
HMGN3-201ENST00000275036 C11orf54Q9H0W9 315 aaPredicted RBP11.33□□□□□ -0.6
HMGN3-201ENST00000275036 OR51E2Q9H255 320 aa11.33□□□□□ -0.6
HMGN3-201ENST00000275036 PIPOXQ9P0Z9 390 aa11.33□□□□□ -0.6
HMGN3-201ENST00000275036 MGAT4AQ9UM21 535 aa11.33□□□□□ -0.6
HMGN3-201ENST00000275036 STUB1Q9UNE7 303 aa11.33□□□□□ -0.6
HMGN3-201ENST00000275036 DNAH9Q9NYC9 4486 aa11.33□□□□□ -0.6
HMGN3-201ENST00000275036 TRDCB7Z8K6 153 aa11.32□□□□□ -0.6
HMGN3-201ENST00000275036 RAB29O14966 203 aa11.32□□□□□ -0.6
HMGN3-201ENST00000275036 PF4P02776 101 aa11.32□□□□□ -0.6
HMGN3-201ENST00000275036 FCGR3AP08637 254 aa11.32□□□□□ -0.6
HMGN3-201ENST00000275036 CD3GP09693 182 aa11.32□□□□□ -0.6
HMGN3-201ENST00000275036 ZBTB25P24278 435 aa11.32□□□□□ -0.6
HMGN3-201ENST00000275036 SOX6P35712 828 aa11.32□□□□□ -0.6
HMGN3-201ENST00000275036 SLC35B1P78383 322 aa11.32□□□□□ -0.6
HMGN3-201ENST00000275036 CFHR3Q02985 330 aa11.32□□□□□ -0.6
HMGN3-201ENST00000275036 FAM71F2Q6NXP2 309 aa11.32□□□□□ -0.6
HMGN3-201ENST00000275036 FAM131AQ6UXB0 335 aa11.32□□□□□ -0.6
HMGN3-201ENST00000275036 LINC00482Q8N8I6 264 aa11.32□□□□□ -0.6
HMGN3-201ENST00000275036 RNF167Q9H6Y7 350 aa11.32□□□□□ -0.6
HMGN3-201ENST00000275036 NECAP2Q9NVZ3 263 aa11.32□□□□□ -0.6
HMGN3-201ENST00000275036 ZNF107Q9UII5 783 aaPredicted RBP11.32□□□□□ -0.6
HMGN3-201ENST00000275036 ELF5Q9UKW6 265 aaPredicted RBP11.32□□□□□ -0.6
HMGN3-201ENST00000275036 RNF150Q9ULK6 438 aa11.32□□□□□ -0.6
HMGN3-201ENST00000275036 RRP15Q9Y3B9 282 aaKnown RBP11.32□□□□□ -0.6
HMGN3-201ENST00000275036 A0A075B6Q4 140 aa11.31□□□□□ -0.6
HMGN3-201ENST00000275036 NBR2O15453 112 aa11.31□□□□□ -0.6
HMGN3-201ENST00000275036 HSPA12AO43301 675 aa11.31□□□□□ -0.6
HMGN3-201ENST00000275036 RPLP1P05386 114 aaKnown RBP11.31□□□□□ -0.6
HMGN3-201ENST00000275036 HIST1H1DP16402 221 aaKnown RBP11.31□□□□□ -0.6
HMGN3-201ENST00000275036 RANBP1P43487 201 aa11.31□□□□□ -0.6
HMGN3-201ENST00000275036 LINC00205P59089 165 aa11.31□□□□□ -0.6
HMGN3-201ENST00000275036 KRTAP10-11P60412 298 aa11.31□□□□□ -0.6
HMGN3-201ENST00000275036 C8orf86Q6ZUL3 223 aa11.31□□□□□ -0.6
HMGN3-201ENST00000275036 COMMD1Q8N668 190 aa11.31□□□□□ -0.6
HMGN3-201ENST00000275036 NPBQ8NG41 125 aa11.31□□□□□ -0.6
HMGN3-201ENST00000275036 MAFIPQ8WZ33 124 aa11.31□□□□□ -0.6
HMGN3-201ENST00000275036 PTX4Q96A99 478 aa11.31□□□□□ -0.6
HMGN3-201ENST00000275036 ZNF230Q9UIE0 474 aaPredicted RBP11.31□□□□□ -0.6
HMGN3-201ENST00000275036 TNCP24821 2201 aa11.3□□□□□ -0.6
HMGN3-201ENST00000275036 IGHV7-81A0A0B4J1V7 117 aa11.3□□□□□ -0.6
HMGN3-201ENST00000275036 NOTOA8MTQ0 251 aa11.3□□□□□ -0.6
HMGN3-201ENST00000275036 H0YJW9 148 aa11.3□□□□□ -0.6
HMGN3-201ENST00000275036 FABP7O15540 132 aa11.3□□□□□ -0.6
HMGN3-201ENST00000275036 NDUFA3O95167 84 aa11.3□□□□□ -0.6
HMGN3-201ENST00000275036 HLA-DRB1P01911 266 aa11.3□□□□□ -0.6
HMGN3-201ENST00000275036 IGF1P05019 195 aa11.3□□□□□ -0.6
HMGN3-201ENST00000275036 CLEC2LP0C7M8 214 aa11.3□□□□□ -0.6
HMGN3-201ENST00000275036 GSTT2P0CG29 244 aa11.3□□□□□ -0.6
HMGN3-201ENST00000275036 GSTT2BP0CG30 244 aa11.3□□□□□ -0.6
HMGN3-201ENST00000275036 SNRPBP14678 240 aaKnown RBP11.3□□□□□ -0.6
HMGN3-201ENST00000275036 THBS3P49746 956 aa11.3□□□□□ -0.6
HMGN3-201ENST00000275036 NEDD8Q15843 81 aa11.3□□□□□ -0.6
HMGN3-201ENST00000275036 PNLIPRP3Q17RR3 467 aa11.3□□□□□ -0.6
HMGN3-201ENST00000275036 C5orf64Q2M2E5 130 aa11.3□□□□□ -0.6
HMGN3-201ENST00000275036 IGSF11Q5DX21 431 aa11.3□□□□□ -0.6
HMGN3-201ENST00000275036 TEX38Q6PEX7 206 aa11.3□□□□□ -0.6
HMGN3-201ENST00000275036 REC114Q7Z4M0 266 aa11.3□□□□□ -0.6
HMGN3-201ENST00000275036 MRPL41Q8IXM3 137 aaKnown RBP11.3□□□□□ -0.6
HMGN3-201ENST00000275036 DRAXINQ8NBI3 349 aaPredicted RBP11.3□□□□□ -0.6
HMGN3-201ENST00000275036 KLHL30-AS1Q8NEE0 82 aa11.3□□□□□ -0.6
HMGN3-201ENST00000275036 OR4A4PQ8NGN8 299 aa11.3□□□□□ -0.6
HMGN3-201ENST00000275036 MRAPQ8TCY5 172 aa11.3□□□□□ -0.6
HMGN3-201ENST00000275036 EDARADDQ8WWZ3 215 aa11.3□□□□□ -0.6
HMGN3-201ENST00000275036 CABLES2Q9BTV7 478 aa11.3□□□□□ -0.6
HMGN3-201ENST00000275036 TOLLIPQ9H0E2 274 aa11.3□□□□□ -0.6
HMGN3-201ENST00000275036 ZFP57Q9NU63 452 aa11.3□□□□□ -0.6
HMGN3-201ENST00000275036 RDH8Q9NYR8 311 aa11.3□□□□□ -0.6
HMGN3-201ENST00000275036 SSR3Q9UNL2 185 aa11.3□□□□□ -0.6
HMGN3-201ENST00000275036 IGKV1D-8A0A087WSZ0 117 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms