RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 S100A4P26447 101 aaKnown RBP11.74□□□□□ -0.53
NPC1-201ENST00000269228 LEAP2Q969E1 77 aa11.74□□□□□ -0.53
NPC1-201ENST00000269228 OR51B2Q9Y5P1 312 aa11.74□□□□□ -0.53
NPC1-201ENST00000269228 CACNA1DQ01668 2161 aa11.74□□□□□ -0.53
NPC1-201ENST00000269228 KIAA0141Q14154 515 aaPredicted RBP11.74□□□□□ -0.53
NPC1-201ENST00000269228 HSF4Q9ULV5 492 aa11.74□□□□□ -0.53
NPC1-201ENST00000269228 WSB1Q9Y6I7 421 aa11.74□□□□□ -0.53
NPC1-201ENST00000269228 A0A1W2PPQ1 181 aa11.74□□□□□ -0.53
NPC1-201ENST00000269228 ERVFC1-1P60608 527 aa11.74□□□□□ -0.53
NPC1-201ENST00000269228 AQP3Q92482 292 aa11.74□□□□□ -0.53
NPC1-201ENST00000269228 CHRDL1Q9BU40 450 aa11.74□□□□□ -0.53
NPC1-201ENST00000269228 ASCL3Q9NQ33 180 aa11.74□□□□□ -0.53
NPC1-201ENST00000269228 SPRR3Q9UBC9 169 aa11.74□□□□□ -0.53
NPC1-201ENST00000269228 MIOXQ9UGB7 285 aa11.74□□□□□ -0.53
NPC1-201ENST00000269228 SH2D7A6NKC9 451 aaPredicted RBP11.74□□□□□ -0.53
NPC1-201ENST00000269228 DBX1A6NMT0 343 aa11.74□□□□□ -0.53
NPC1-201ENST00000269228 KCNMB1Q16558 191 aa11.74□□□□□ -0.53
NPC1-201ENST00000269228 GPHA2Q96T91 129 aa11.74□□□□□ -0.53
NPC1-201ENST00000269228 CCL19Q99731 98 aa11.74□□□□□ -0.53
NPC1-201ENST00000269228 CTDSP1Q9GZU7 261 aa11.74□□□□□ -0.53
NPC1-201ENST00000269228 MYO7BQ6PIF6 2116 aa11.74□□□□□ -0.53
NPC1-201ENST00000269228 CDK2AP1O14519 115 aa11.73□□□□□ -0.53
NPC1-201ENST00000269228 SPP1P10451 314 aa11.73□□□□□ -0.53
NPC1-201ENST00000269228 FAM209AQ5JX71 171 aa11.73□□□□□ -0.53
NPC1-201ENST00000269228 CLLU1Q5K131 121 aa11.73□□□□□ -0.53
NPC1-201ENST00000269228 ZNRF1Q8ND25 227 aa11.73□□□□□ -0.53
NPC1-201ENST00000269228 MEGF10Q96KG7 1140 aa11.73□□□□□ -0.53
NPC1-201ENST00000269228 IDI2-AS1Q9NZ38 188 aa11.73□□□□□ -0.53
NPC1-201ENST00000269228 IGKV3-7A0A075B6H7 116 aa11.73□□□□□ -0.53
NPC1-201ENST00000269228 VSIG10L2P0DP72 767 aa11.73□□□□□ -0.53
NPC1-201ENST00000269228 SULT1A1P50225 295 aa11.73□□□□□ -0.53
NPC1-201ENST00000269228 UBE2L3P68036 154 aaKnown RBP11.73□□□□□ -0.53
NPC1-201ENST00000269228 COMMD1Q8N668 190 aa11.73□□□□□ -0.53
NPC1-201ENST00000269228 SCMH1Q96GD3 660 aa11.73□□□□□ -0.53
NPC1-201ENST00000269228 KIF26BQ2KJY2 2108 aa11.73□□□□□ -0.53
NPC1-201ENST00000269228 NPIPB7O75200 414 aa11.73□□□□□ -0.53
NPC1-201ENST00000269228 LYPD3O95274 346 aa11.73□□□□□ -0.53
NPC1-201ENST00000269228 EWSR1Q01844 656 aaKnown RBP eCLIP11.73□□□□□ -0.53
NPC1-201ENST00000269228 NRN1LQ496H8 165 aa11.73□□□□□ -0.53
NPC1-201ENST00000269228 ZNF429Q86V71 674 aa11.73□□□□□ -0.53
NPC1-201ENST00000269228 BMPERQ8N8U9 685 aa11.73□□□□□ -0.53
NPC1-201ENST00000269228 RHOVQ96L33 236 aa11.73□□□□□ -0.53
NPC1-201ENST00000269228 TXN2Q99757 166 aa11.73□□□□□ -0.53
NPC1-201ENST00000269228 MRPL13Q9BYD1 178 aaKnown RBP11.73□□□□□ -0.53
NPC1-201ENST00000269228 ZFHX2Q9C0A1 2572 aaPredicted RBP11.73□□□□□ -0.53
NPC1-201ENST00000269228 SNRNP200O75643 2136 aaKnown RBP11.73□□□□□ -0.53
NPC1-201ENST00000269228 ZNF737O75373 536 aa11.73□□□□□ -0.53
NPC1-201ENST00000269228 SFTA3P0C7M3 94 aa11.73□□□□□ -0.53
NPC1-201ENST00000269228 TMEM14DPA8MWL7 114 aa11.73□□□□□ -0.53
NPC1-201ENST00000269228 HLA-GP17693 338 aa11.73□□□□□ -0.53
NPC1-201ENST00000269228 PTGDSP41222 190 aa11.73□□□□□ -0.53
NPC1-201ENST00000269228 Q0VFX4 171 aa11.73□□□□□ -0.53
NPC1-201ENST00000269228 SRSF6Q13247 344 aaKnown RBP11.73□□□□□ -0.53
NPC1-201ENST00000269228 C1QL2Q7Z5L3 287 aa11.73□□□□□ -0.53
NPC1-201ENST00000269228 ALX4Q9H161 411 aaPredicted RBP11.73□□□□□ -0.53
NPC1-201ENST00000269228 TRBV23-1A0A0A0MS06 115 aa11.72□□□□□ -0.53
NPC1-201ENST00000269228 MC5RP33032 325 aa11.72□□□□□ -0.53
NPC1-201ENST00000269228 PDLIM4P50479 330 aa11.72□□□□□ -0.53
NPC1-201ENST00000269228 PSG7Q13046 419 aa11.72□□□□□ -0.53
NPC1-201ENST00000269228 GAMTQ14353 236 aa11.72□□□□□ -0.53
NPC1-201ENST00000269228 RGP1Q92546 391 aaPredicted RBP11.72□□□□□ -0.53
NPC1-201ENST00000269228 CLEC5AQ9NY25 188 aa11.72□□□□□ -0.53
NPC1-201ENST00000269228 PPP1R2P9O14990 202 aa11.72□□□□□ -0.53
NPC1-201ENST00000269228 TBR1Q16650 682 aa11.72□□□□□ -0.53
NPC1-201ENST00000269228 FAM201AQ5SY85 155 aa11.72□□□□□ -0.53
NPC1-201ENST00000269228 FAM78BQ5VT40 261 aa11.72□□□□□ -0.53
NPC1-201ENST00000269228 GPR132Q9UNW8 380 aa11.72□□□□□ -0.53
NPC1-201ENST00000269228 LOC105371242A0A075B767 164 aa11.72□□□□□ -0.53
NPC1-201ENST00000269228 C20orf202A1L168 122 aa11.72□□□□□ -0.53
NPC1-201ENST00000269228 PAX6P26367 422 aa11.72□□□□□ -0.53
NPC1-201ENST00000269228 ZNF705AQ6ZN79 300 aaPredicted RBP11.72□□□□□ -0.53
NPC1-201ENST00000269228 CDRT15L2A8MXV6 281 aa11.72□□□□□ -0.53
NPC1-201ENST00000269228 EFNA2O43921 213 aa11.72□□□□□ -0.53
NPC1-201ENST00000269228 RHBDL1O75783 438 aa11.72□□□□□ -0.53
NPC1-201ENST00000269228 RPL27AP46776 148 aaKnown RBP11.72□□□□□ -0.53
NPC1-201ENST00000269228 ZNF66Q6ZN08 573 aa11.72□□□□□ -0.53
NPC1-201ENST00000269228 ZNF645Q8N7E2 425 aa11.72□□□□□ -0.53
NPC1-201ENST00000269228 MMP26Q9NRE1 261 aa11.72□□□□□ -0.53
NPC1-201ENST00000269228 SEMA5BQ9P283 1151 aa11.72□□□□□ -0.53
NPC1-201ENST00000269228 MMP24Q9Y5R2 645 aa11.72□□□□□ -0.53
NPC1-201ENST00000269228 TICRRQ7Z2Z1 1910 aa11.71□□□□□ -0.53
NPC1-201ENST00000269228 TRIM77I1YAP6 450 aa11.71□□□□□ -0.53
NPC1-201ENST00000269228 MST1P26927 711 aa11.71□□□□□ -0.53
NPC1-201ENST00000269228 Q8WTZ3 238 aa11.71□□□□□ -0.53
NPC1-201ENST00000269228 C1QTNF5Q9BXJ0 243 aa11.71□□□□□ -0.53
NPC1-201ENST00000269228 PARP11Q9NR21 331 aa11.71□□□□□ -0.53
NPC1-201ENST00000269228 DUXBA0A1W2PPF3 345 aa11.71□□□□□ -0.53
NPC1-201ENST00000269228 PAX5Q02548 391 aa11.71□□□□□ -0.53
NPC1-201ENST00000269228 FABP9Q0Z7S8 132 aa11.71□□□□□ -0.53
NPC1-201ENST00000269228 SSX7Q7RTT5 188 aa11.71□□□□□ -0.53
NPC1-201ENST00000269228 ABHD12Q8N2K0 398 aa11.71□□□□□ -0.53
NPC1-201ENST00000269228 ZNF561Q8N587 486 aa11.71□□□□□ -0.53
NPC1-201ENST00000269228 OR5R1Q8NH85 324 aa11.71□□□□□ -0.53
NPC1-201ENST00000269228 SHISA3A0PJX4 238 aa11.71□□□□□ -0.54
NPC1-201ENST00000269228 ZNF716A6NP11 495 aa11.71□□□□□ -0.54
NPC1-201ENST00000269228 SS18L1O75177 396 aaPredicted RBP11.71□□□□□ -0.54
NPC1-201ENST00000269228 FAM106CPP0CH98 169 aa11.71□□□□□ -0.54
NPC1-201ENST00000269228 TMEM106BQ9NUM4 274 aa11.71□□□□□ -0.54
NPC1-201ENST00000269228 H0Y980 276 aa11.71□□□□□ -0.54
NPC1-201ENST00000269228 HTR1DP28221 377 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms