RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 AGMATQ9BSE5 352 aa12.63□□□□□ -0.39
USE1-201ENST00000263897 GHITMQ9H3K2 345 aa12.63□□□□□ -0.39
USE1-201ENST00000263897 PIPOXQ9P0Z9 390 aa12.63□□□□□ -0.39
USE1-201ENST00000263897 SHISA3A0PJX4 238 aa12.62□□□□□ -0.39
USE1-201ENST00000263897 NUDT19A8MXV4 375 aa12.62□□□□□ -0.39
USE1-201ENST00000263897 DUS4LO95620 317 aaKnown RBP12.62□□□□□ -0.39
USE1-201ENST00000263897 IGF1P05019 195 aa12.62□□□□□ -0.39
USE1-201ENST00000263897 SCTP09683 121 aa12.62□□□□□ -0.39
USE1-201ENST00000263897 GALP22466 123 aa12.62□□□□□ -0.39
USE1-201ENST00000263897 ZBTB25P24278 435 aa12.62□□□□□ -0.39
USE1-201ENST00000263897 CEACAM6P40199 344 aa12.62□□□□□ -0.39
USE1-201ENST00000263897 MYCNOSP40205 109 aa12.62□□□□□ -0.39
USE1-201ENST00000263897 PLA2G7Q13093 441 aa12.62□□□□□ -0.39
USE1-201ENST00000263897 FOXE3Q13461 319 aa12.62□□□□□ -0.39
USE1-201ENST00000263897 FAM71F2Q6NXP2 309 aa12.62□□□□□ -0.39
USE1-201ENST00000263897 C8orf86Q6ZUL3 223 aa12.62□□□□□ -0.39
USE1-201ENST00000263897 ZNF695Q8IW36 515 aa12.62□□□□□ -0.39
USE1-201ENST00000263897 CMSS1Q9BQ75 279 aaKnown RBP12.62□□□□□ -0.39
USE1-201ENST00000263897 PARP12Q9H0J9 701 aaKnown RBP12.62□□□□□ -0.39
USE1-201ENST00000263897 C12orf4Q9NQ89 552 aa12.62□□□□□ -0.39
USE1-201ENST00000263897 ZNF107Q9UII5 783 aaPredicted RBP12.62□□□□□ -0.39
USE1-201ENST00000263897 ZNF580Q9UK33 172 aa12.62□□□□□ -0.39
USE1-201ENST00000263897 IFITM5A6NNB3 132 aa12.61□□□□□ -0.39
USE1-201ENST00000263897 HSPA12AO43301 675 aa12.61□□□□□ -0.39
USE1-201ENST00000263897 RPLP1P05386 114 aaKnown RBP12.61□□□□□ -0.39
USE1-201ENST00000263897 ELANEP08246 267 aa12.61□□□□□ -0.39
USE1-201ENST00000263897 CT45A6P0DMU7 189 aa12.61□□□□□ -0.39
USE1-201ENST00000263897 CT45A5P0DMU8 189 aa12.61□□□□□ -0.39
USE1-201ENST00000263897 CT45A7P0DMV0 189 aa12.61□□□□□ -0.39
USE1-201ENST00000263897 SLC2A2P11168 524 aaPredicted RBP12.61□□□□□ -0.39
USE1-201ENST00000263897 CNTFRP26992 372 aa12.61□□□□□ -0.39
USE1-201ENST00000263897 OR10A3P58181 314 aa12.61□□□□□ -0.39
USE1-201ENST00000263897 HLA-DRB3P79483 266 aa12.61□□□□□ -0.39
USE1-201ENST00000263897 CFHR3Q02985 330 aa12.61□□□□□ -0.39
USE1-201ENST00000263897 RPL39P5Q59GN2 51 aa12.61□□□□□ -0.39
USE1-201ENST00000263897 CXorf66Q5JRM2 361 aaPredicted RBP12.61□□□□□ -0.39
USE1-201ENST00000263897 RNF152Q8N8N0 203 aa12.61□□□□□ -0.39
USE1-201ENST00000263897 KLHL30-AS1Q8NEE0 82 aa12.61□□□□□ -0.39
USE1-201ENST00000263897 NPBQ8NG41 125 aa12.61□□□□□ -0.39
USE1-201ENST00000263897 EDARADDQ8WWZ3 215 aa12.61□□□□□ -0.39
USE1-201ENST00000263897 P2RX4Q99571 388 aa12.61□□□□□ -0.39
USE1-201ENST00000263897 CHCHD6Q9BRQ6 235 aa12.61□□□□□ -0.39
USE1-201ENST00000263897 YTHDF1Q9BYJ9 559 aaKnown RBP12.61□□□□□ -0.39
USE1-201ENST00000263897 C11orf54Q9H0W9 315 aaPredicted RBP12.61□□□□□ -0.39
USE1-201ENST00000263897 AURKAIP1Q9NWT8 199 aaPredicted RBP12.61□□□□□ -0.39
USE1-201ENST00000263897 OR1A1Q9P1Q5 309 aa12.61□□□□□ -0.39
USE1-201ENST00000263897 KCNK7Q9Y2U2 307 aa12.61□□□□□ -0.39
USE1-201ENST00000263897 TRDCB7Z8K6 153 aa12.6□□□□□ -0.39
USE1-201ENST00000263897 NBR2O15453 112 aa12.6□□□□□ -0.39
USE1-201ENST00000263897 IGHG4P01861 327 aa12.6□□□□□ -0.39
USE1-201ENST00000263897 RAB3BP20337 219 aa12.6□□□□□ -0.39
USE1-201ENST00000263897 VDAC1P21796 283 aa12.6□□□□□ -0.39
USE1-201ENST00000263897 MYL9P24844 172 aa12.6□□□□□ -0.39
USE1-201ENST00000263897 CDX1P47902 265 aaPredicted RBP12.6□□□□□ -0.39
USE1-201ENST00000263897 C5orf64Q2M2E5 130 aa12.6□□□□□ -0.39
USE1-201ENST00000263897 UBE2UQ5VVX9 321 aa12.6□□□□□ -0.39
USE1-201ENST00000263897 LIN54Q6MZP7 749 aa12.6□□□□□ -0.39
USE1-201ENST00000263897 SPARTQ8N0X7 666 aa12.6□□□□□ -0.39
USE1-201ENST00000263897 PTX4Q96A99 478 aa12.6□□□□□ -0.39
USE1-201ENST00000263897 RAB3CQ96E17 227 aa12.6□□□□□ -0.39
USE1-201ENST00000263897 ABHD14BQ96IU4 210 aa12.6□□□□□ -0.39
USE1-201ENST00000263897 Q9H521 79 aa12.6□□□□□ -0.39
USE1-201ENST00000263897 IGKV1-6A0A0C4DH72 117 aa12.59□□□□□ -0.39
USE1-201ENST00000263897 PROP1O75360 226 aa12.59□□□□□ -0.39
USE1-201ENST00000263897 NDUFA3O95167 84 aa12.59□□□□□ -0.39
USE1-201ENST00000263897 HLA-DRB1P01911 266 aa12.59□□□□□ -0.39
USE1-201ENST00000263897 OR5H8P0DN80 308 aa12.59□□□□□ -0.39
USE1-201ENST00000263897 MC5RP33032 325 aa12.59□□□□□ -0.39
USE1-201ENST00000263897 MOGAT2Q3SYC2 334 aa12.59□□□□□ -0.39
USE1-201ENST00000263897 C22orf42Q6IC83 251 aa12.59□□□□□ -0.39
USE1-201ENST00000263897 FAM131AQ6UXB0 335 aa12.59□□□□□ -0.39
USE1-201ENST00000263897 LCNL1Q6ZST4 164 aa12.59□□□□□ -0.39
USE1-201ENST00000263897 OR10R2Q8NGX6 335 aa12.59□□□□□ -0.39
USE1-201ENST00000263897 MRAPQ8TCY5 172 aa12.59□□□□□ -0.39
USE1-201ENST00000263897 KCTD7Q96MP8 289 aa12.59□□□□□ -0.39
USE1-201ENST00000263897 OR51J1Q9H342 316 aa12.59□□□□□ -0.39
USE1-201ENST00000263897 RNF150Q9ULK6 438 aa12.59□□□□□ -0.39
USE1-201ENST00000263897 IGHV7-81A0A0B4J1V7 117 aa12.58□□□□□ -0.4
USE1-201ENST00000263897 OR5H14A6NHG9 310 aa12.58□□□□□ -0.4
USE1-201ENST00000263897 CCL24O00175 119 aa12.58□□□□□ -0.4
USE1-201ENST00000263897 RAB27BO00194 218 aa12.58□□□□□ -0.4
USE1-201ENST00000263897 CD3GP09693 182 aa12.58□□□□□ -0.4
USE1-201ENST00000263897 RAB6AP20340 208 aa12.58□□□□□ -0.4
USE1-201ENST00000263897 PSMB8P28062 276 aa12.58□□□□□ -0.4
USE1-201ENST00000263897 PPIFP30405 207 aaKnown RBP12.58□□□□□ -0.4
USE1-201ENST00000263897 FGF9P31371 208 aaPredicted RBP12.58□□□□□ -0.4
USE1-201ENST00000263897 KIR2DS1Q14954 304 aa12.58□□□□□ -0.4
USE1-201ENST00000263897 GLDNQ6ZMI3 551 aaPredicted RBP12.58□□□□□ -0.4
USE1-201ENST00000263897 NR2C2APQ86WQ0 139 aa12.58□□□□□ -0.4
USE1-201ENST00000263897 OR5AN1Q8NGI8 311 aa12.58□□□□□ -0.4
USE1-201ENST00000263897 RAX2Q96IS3 184 aa12.58□□□□□ -0.4
USE1-201ENST00000263897 KIAA1456Q9P272 454 aa12.58□□□□□ -0.4
USE1-201ENST00000263897 WSB1Q9Y6I7 421 aa12.58□□□□□ -0.4
USE1-201ENST00000263897 METTL21EPA6NDL7 271 aa12.57□□□□□ -0.4
USE1-201ENST00000263897 H0YJW9 148 aa12.57□□□□□ -0.4
USE1-201ENST00000263897 GADD45AP24522 165 aa12.57□□□□□ -0.4
USE1-201ENST00000263897 PSMB9P28065 219 aa12.57□□□□□ -0.4
USE1-201ENST00000263897 KRTAP10-11P60412 298 aa12.57□□□□□ -0.4
USE1-201ENST00000263897 MRPS15P82914 257 aaKnown RBP12.57□□□□□ -0.4
USE1-201ENST00000263897 OR4A4PQ8NGN8 299 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms