RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 USF3Q68DE3 2245 aa18.82■□□□□ 0.6
SMARCB1-201ENST00000263121 HOXB5P09067 269 aa18.82■□□□□ 0.6
SMARCB1-201ENST00000263121 NFYBP25208 207 aa18.82■□□□□ 0.6
SMARCB1-201ENST00000263121 ZNF525Q8N782 197 aa18.82■□□□□ 0.6
SMARCB1-201ENST00000263121 OR11H4Q8NGC9 324 aa18.82■□□□□ 0.6
SMARCB1-201ENST00000263121 OR51H1Q8NH63 302 aa18.82■□□□□ 0.6
SMARCB1-201ENST00000263121 C8orf46Q8TAG6 207 aa18.82■□□□□ 0.6
SMARCB1-201ENST00000263121 LEAP2Q969E1 77 aa18.82■□□□□ 0.6
SMARCB1-201ENST00000263121 SEC22AQ96IW7 307 aa18.82■□□□□ 0.6
SMARCB1-201ENST00000263121 PDCD10Q9BUL8 212 aa18.82■□□□□ 0.6
SMARCB1-201ENST00000263121 METTL8Q9H825 291 aaKnown RBP18.82■□□□□ 0.6
SMARCB1-201ENST00000263121 SDHAF2Q9NX18 166 aa18.82■□□□□ 0.6
SMARCB1-201ENST00000263121 C5orf51A6NDU8 294 aa18.81■□□□□ 0.6
SMARCB1-201ENST00000263121 MPTX1A8MV57 137 aa18.81■□□□□ 0.6
SMARCB1-201ENST00000263121 SLC31A2O15432 143 aa18.81■□□□□ 0.6
SMARCB1-201ENST00000263121 CDS2O95674 445 aa18.81■□□□□ 0.6
SMARCB1-201ENST00000263121 IGHV3-7P01780 117 aa18.81■□□□□ 0.6
SMARCB1-201ENST00000263121 RAB7AP51149 207 aa18.81■□□□□ 0.6
SMARCB1-201ENST00000263121 CT45A1Q5HYN5 189 aa18.81■□□□□ 0.6
SMARCB1-201ENST00000263121 CT45A3Q8NHU0 189 aa18.81■□□□□ 0.6
SMARCB1-201ENST00000263121 ABHD14AQ9BUJ0 271 aa18.81■□□□□ 0.6
SMARCB1-201ENST00000263121 C13orf42A0A1B0GVH6 325 aa18.8■□□□□ 0.6
SMARCB1-201ENST00000263121 ERVFRD-1P60508 538 aa18.8■□□□□ 0.6
SMARCB1-201ENST00000263121 OR10C1Q96KK4 312 aa18.8■□□□□ 0.6
SMARCB1-201ENST00000263121 LIN7CQ9NUP9 197 aaKnown RBP18.8■□□□□ 0.6
SMARCB1-201ENST00000263121 RNF212BA8MTL3 300 aa18.79■□□□□ 0.6
SMARCB1-201ENST00000263121 GPR12P47775 334 aa18.79■□□□□ 0.6
SMARCB1-201ENST00000263121 TMEM268Q5VZI3 342 aa18.79■□□□□ 0.6
SMARCB1-201ENST00000263121 GGNBP1Q5YKI7 109 aa18.79■□□□□ 0.6
SMARCB1-201ENST00000263121 LYZL2Q7Z4W2 148 aa18.79■□□□□ 0.6
SMARCB1-201ENST00000263121 NMES1Q9C002 83 aa18.79■□□□□ 0.6
SMARCB1-201ENST00000263121 GAB2Q9UQC2 676 aa18.79■□□□□ 0.6
SMARCB1-201ENST00000263121 C17orf98A8MV24 154 aa18.79■□□□□ 0.6
SMARCB1-201ENST00000263121 Q3ZCU0 254 aa18.79■□□□□ 0.6
SMARCB1-201ENST00000263121 SELENOHQ8IZQ5 122 aaKnown RBP18.79■□□□□ 0.6
SMARCB1-201ENST00000263121 C11orf42Q8N5U0 333 aa18.79■□□□□ 0.6
SMARCB1-201ENST00000263121 SLC35G3Q8N808 338 aa18.79■□□□□ 0.6
SMARCB1-201ENST00000263121 LY6G5BQ8NDX9 201 aa18.79■□□□□ 0.6
SMARCB1-201ENST00000263121 IL22RA2Q969J5 263 aa18.79■□□□□ 0.6
SMARCB1-201ENST00000263121 NARFLQ9H6Q4 476 aa18.79■□□□□ 0.6
SMARCB1-201ENST00000263121 PROP1O75360 226 aa18.78■□□□□ 0.6
SMARCB1-201ENST00000263121 IFNA21P01568 189 aa18.78■□□□□ 0.6
SMARCB1-201ENST00000263121 GNB2P62879 340 aa18.78■□□□□ 0.6
SMARCB1-201ENST00000263121 RPL30P62888 115 aaKnown RBP18.78■□□□□ 0.6
SMARCB1-201ENST00000263121 CYCSP99999 105 aaKnown RBP18.78■□□□□ 0.6
SMARCB1-201ENST00000263121 BTNL3Q6UXE8 466 aa18.78■□□□□ 0.6
SMARCB1-201ENST00000263121 ZNF66Q6ZN08 573 aa18.78■□□□□ 0.6
SMARCB1-201ENST00000263121 SLC25A48Q6ZT89 311 aaKnown RBP18.78■□□□□ 0.6
SMARCB1-201ENST00000263121 C2orf50Q96LR7 162 aa18.78■□□□□ 0.6
SMARCB1-201ENST00000263121 TRAV14DV4A0A0A6YYC5 116 aa18.77■□□□□ 0.6
SMARCB1-201ENST00000263121 A0A1W2PPE3 182 aa18.77■□□□□ 0.6
SMARCB1-201ENST00000263121 DUXBA0A1W2PPF3 345 aa18.77■□□□□ 0.6
SMARCB1-201ENST00000263121 PDLIM4P50479 330 aa18.77■□□□□ 0.6
SMARCB1-201ENST00000263121 ZNF695Q8IW36 515 aa18.77■□□□□ 0.6
SMARCB1-201ENST00000263121 RBPMSQ93062 196 aaKnown RBP18.77■□□□□ 0.6
SMARCB1-201ENST00000263121 RAB39BQ96DA2 213 aa18.77■□□□□ 0.6
SMARCB1-201ENST00000263121 HSD17B10Q99714 261 aaKnown RBP18.77■□□□□ 0.6
SMARCB1-201ENST00000263121 SSBP3Q9BWW4 388 aaPredicted RBP18.77■□□□□ 0.6
SMARCB1-201ENST00000263121 TMED3Q9Y3Q3 217 aa18.77■□□□□ 0.6
SMARCB1-201ENST00000263121 LRRK2Q5S007 2527 aa18.77■□□□□ 0.6
SMARCB1-201ENST00000263121 YLPM1P49750 1951 aaKnown RBP18.77■□□□□ 0.59
SMARCB1-201ENST00000263121 A0A087X0M5 115 aa18.76■□□□□ 0.59
SMARCB1-201ENST00000263121 PPIAL4CA0A0B4J2A2 164 aa18.76■□□□□ 0.59
SMARCB1-201ENST00000263121 A0A1B0GX30 115 aa18.76■□□□□ 0.59
SMARCB1-201ENST00000263121 C22orf46C9J442 243 aa18.76■□□□□ 0.59
SMARCB1-201ENST00000263121 PPIAL4GP0DN37 164 aa18.76■□□□□ 0.59
SMARCB1-201ENST00000263121 COL8A1P27658 744 aa18.76■□□□□ 0.59
SMARCB1-201ENST00000263121 GNG10P50151 68 aa18.76■□□□□ 0.59
SMARCB1-201ENST00000263121 CATR1Q13166 79 aa18.76■□□□□ 0.59
SMARCB1-201ENST00000263121 IL15RAQ13261 267 aa18.76■□□□□ 0.59
SMARCB1-201ENST00000263121 ODF3L1Q8IXM7 274 aa18.76■□□□□ 0.59
SMARCB1-201ENST00000263121 ZNF436-AS1Q8NC38 126 aaPredicted RBP18.76■□□□□ 0.59
SMARCB1-201ENST00000263121 PPP1R1CQ8WVI7 109 aa18.76■□□□□ 0.59
SMARCB1-201ENST00000263121 BPESC1Q9GZL8 116 aa18.76■□□□□ 0.59
SMARCB1-201ENST00000263121 A0A1W2PPH5 198 aa18.76■□□□□ 0.59
SMARCB1-201ENST00000263121 IGHV2-5P01817 119 aa18.76■□□□□ 0.59
SMARCB1-201ENST00000263121 SERPINE2P07093 398 aa18.76■□□□□ 0.59
SMARCB1-201ENST00000263121 IGHV1-8P0DP01 117 aa18.76■□□□□ 0.59
SMARCB1-201ENST00000263121 ZNF16P17020 682 aaPredicted RBP18.76■□□□□ 0.59
SMARCB1-201ENST00000263121 ZNF585BQ52M93 769 aa18.76■□□□□ 0.59
SMARCB1-201ENST00000263121 BARX1Q9HBU1 254 aaPredicted RBP18.76■□□□□ 0.59
SMARCB1-201ENST00000263121 UTP20O75691 2785 aaKnown RBP18.75■□□□□ 0.59
SMARCB1-201ENST00000263121 DOCK11Q5JSL3 2073 aa18.75■□□□□ 0.59
SMARCB1-201ENST00000263121 RBP4P02753 201 aa18.75■□□□□ 0.59
SMARCB1-201ENST00000263121 PAX1P15863 534 aa18.75■□□□□ 0.59
SMARCB1-201ENST00000263121 FGL1Q08830 312 aa18.75■□□□□ 0.59
SMARCB1-201ENST00000263121 IAH1Q2TAA2 248 aaPredicted RBP18.75■□□□□ 0.59
SMARCB1-201ENST00000263121 ESCO2Q56NI9 601 aa18.75■□□□□ 0.59
SMARCB1-201ENST00000263121 RPL39P5Q59GN2 51 aa18.75■□□□□ 0.59
SMARCB1-201ENST00000263121 LAMTOR1Q6IAA8 161 aa18.75■□□□□ 0.59
SMARCB1-201ENST00000263121 TCTEX1D1Q8N7M0 179 aa18.75■□□□□ 0.59
SMARCB1-201ENST00000263121 C8orf31Q8N9H6 132 aa18.75■□□□□ 0.59
SMARCB1-201ENST00000263121 GRPEL2Q8TAA5 225 aa18.75■□□□□ 0.59
SMARCB1-201ENST00000263121 ZNF596Q8TC21 504 aa18.75■□□□□ 0.59
SMARCB1-201ENST00000263121 FAM212BQ9NTI7 297 aaPredicted RBP18.75■□□□□ 0.59
SMARCB1-201ENST00000263121 COMMD9Q9P000 198 aa18.75■□□□□ 0.59
SMARCB1-201ENST00000263121 MALRD1Q5VYJ5 2156 aa18.75■□□□□ 0.59
SMARCB1-201ENST00000263121 PIGBOS1A0A0B4J2F0 54 aa18.74■□□□□ 0.59
SMARCB1-201ENST00000263121 LINC00473A8K010 186 aa18.74■□□□□ 0.59
SMARCB1-201ENST00000263121 RAB29O14966 203 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms