RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 LYPD2Q6UXB3 125 aa18.52■□□□□ 0.55
SIX3-201ENST00000260653 OR52M1Q8NGK5 317 aa18.52■□□□□ 0.55
SIX3-201ENST00000260653 RBPMSQ93062 196 aaKnown RBP18.52■□□□□ 0.55
SIX3-201ENST00000260653 JPT1Q9UK76 154 aa18.52■□□□□ 0.55
SIX3-201ENST00000260653 PSG11Q9UQ72 335 aa18.52■□□□□ 0.55
SIX3-201ENST00000260653 SCGB1D2O95969 90 aa18.51■□□□□ 0.55
SIX3-201ENST00000260653 CFDP00746 253 aaPredicted RBP18.51■□□□□ 0.55
SIX3-201ENST00000260653 ZNF16P17020 682 aaPredicted RBP18.51■□□□□ 0.55
SIX3-201ENST00000260653 PPOXP50336 477 aa18.51■□□□□ 0.55
SIX3-201ENST00000260653 HFEQ30201 348 aa18.51■□□□□ 0.55
SIX3-201ENST00000260653 ZNF680Q8NEM1 530 aa18.51■□□□□ 0.55
SIX3-201ENST00000260653 RRNAD1Q96FB5 475 aaKnown RBP18.51■□□□□ 0.55
SIX3-201ENST00000260653 ABHD14BQ96IU4 210 aa18.51■□□□□ 0.55
SIX3-201ENST00000260653 A0A1W2PPR1 153 aa18.51■□□□□ 0.55
SIX3-201ENST00000260653 IGHV3-7P01780 117 aa18.51■□□□□ 0.55
SIX3-201ENST00000260653 PRB1P04280 392 aa18.51■□□□□ 0.55
SIX3-201ENST00000260653 ZNF345Q14585 488 aa18.51■□□□□ 0.55
SIX3-201ENST00000260653 ACOT7LQ6ZUV0 252 aa18.51■□□□□ 0.55
SIX3-201ENST00000260653 OR1S1Q8NH92 325 aa18.51■□□□□ 0.55
SIX3-201ENST00000260653 AGMATQ9BSE5 352 aa18.51■□□□□ 0.55
SIX3-201ENST00000260653 TNFRSF13BO14836 293 aaPredicted RBP18.5■□□□□ 0.55
SIX3-201ENST00000260653 ADAM20O43506 726 aa18.5■□□□□ 0.55
SIX3-201ENST00000260653 SOD3P08294 240 aa18.5■□□□□ 0.55
SIX3-201ENST00000260653 WNT2P09544 360 aa18.5■□□□□ 0.55
SIX3-201ENST00000260653 RELQ04864 619 aaPredicted RBP18.5■□□□□ 0.55
SIX3-201ENST00000260653 MORN2Q502X0 79 aa18.5■□□□□ 0.55
SIX3-201ENST00000260653 UTF1Q5T230 341 aa18.5■□□□□ 0.55
SIX3-201ENST00000260653 ZNF767PQ75MW2 155 aa18.5■□□□□ 0.55
SIX3-201ENST00000260653 KCNRGQ8N5I3 272 aa18.5■□□□□ 0.55
SIX3-201ENST00000260653 INO80EQ8NBZ0 244 aaPredicted RBP18.5■□□□□ 0.55
SIX3-201ENST00000260653 BBC3Q96PG8 261 aaPredicted RBP18.5■□□□□ 0.55
SIX3-201ENST00000260653 RALYQ9UKM9 306 aaKnown RBP18.5■□□□□ 0.55
SIX3-201ENST00000260653 KBTBD11-OT1A0A1B0GTJ5 212 aa18.5■□□□□ 0.55
SIX3-201ENST00000260653 OR2F2O95006 317 aa18.5■□□□□ 0.55
SIX3-201ENST00000260653 SERPINE2P07093 398 aa18.5■□□□□ 0.55
SIX3-201ENST00000260653 PET100P0DJ07 73 aa18.5■□□□□ 0.55
SIX3-201ENST00000260653 LYL1P12980 280 aa18.5■□□□□ 0.55
SIX3-201ENST00000260653 COL8A2P25067 703 aa18.5■□□□□ 0.55
SIX3-201ENST00000260653 OR2F1Q13607 317 aa18.5■□□□□ 0.55
SIX3-201ENST00000260653 CBLN4Q9NTU7 201 aa18.5■□□□□ 0.55
SIX3-201ENST00000260653 LIN7CQ9NUP9 197 aaKnown RBP18.5■□□□□ 0.55
SIX3-201ENST00000260653 CLN8Q9UBY8 286 aa18.5■□□□□ 0.55
SIX3-201ENST00000260653 YLPM1P49750 1951 aaKnown RBP18.5■□□□□ 0.55
SIX3-201ENST00000260653 MYO18BQ8IUG5 2567 aa18.49■□□□□ 0.55
SIX3-201ENST00000260653 A0A0D9SG52 128 aa18.49■□□□□ 0.55
SIX3-201ENST00000260653 RP2O75695 350 aa18.49■□□□□ 0.55
SIX3-201ENST00000260653 BTNL3Q6UXE8 466 aa18.49■□□□□ 0.55
SIX3-201ENST00000260653 CTSZQ9UBR2 303 aa18.49■□□□□ 0.55
SIX3-201ENST00000260653 LSM5Q9Y4Y9 91 aaKnown RBP18.49■□□□□ 0.55
SIX3-201ENST00000260653 COL12A1Q99715 3063 aa18.49■□□□□ 0.55
SIX3-201ENST00000260653 USP9XQ93008 2570 aaPredicted RBP18.49■□□□□ 0.55
SIX3-201ENST00000260653 MBPP02686 304 aaPredicted RBP18.49■□□□□ 0.55
SIX3-201ENST00000260653 NMSQ5H8A3 153 aa18.49■□□□□ 0.55
SIX3-201ENST00000260653 C11orf71Q6IPW1 123 aa18.49■□□□□ 0.55
SIX3-201ENST00000260653 CCDC28AQ8IWP9 274 aa18.49■□□□□ 0.55
SIX3-201ENST00000260653 IL22RA2Q969J5 263 aa18.49■□□□□ 0.55
SIX3-201ENST00000260653 C19orf12Q9NSK7 152 aa18.49■□□□□ 0.55
SIX3-201ENST00000260653 EIF4EBP1Q13541 118 aaPredicted RBP18.48■□□□□ 0.55
SIX3-201ENST00000260653 EXOSC2Q13868 293 aaKnown RBP18.48■□□□□ 0.55
SIX3-201ENST00000260653 EDARADDQ8WWZ3 215 aa18.48■□□□□ 0.55
SIX3-201ENST00000260653 LEAP2Q969E1 77 aa18.48■□□□□ 0.55
SIX3-201ENST00000260653 MSGN1A6NI15 193 aa18.48■□□□□ 0.55
SIX3-201ENST00000260653 YPEL1O60688 119 aa18.48■□□□□ 0.55
SIX3-201ENST00000260653 IGKV1-39P01597 117 aa18.48■□□□□ 0.55
SIX3-201ENST00000260653 IGKV1D-39P04432 117 aa18.48■□□□□ 0.55
SIX3-201ENST00000260653 VDAC1P21796 283 aa18.48■□□□□ 0.55
SIX3-201ENST00000260653 RPL30P62888 115 aaKnown RBP18.48■□□□□ 0.55
SIX3-201ENST00000260653 ZBTB34Q8NCN2 500 aa18.48■□□□□ 0.55
SIX3-201ENST00000260653 YPEL2Q96QA6 119 aa18.48■□□□□ 0.55
SIX3-201ENST00000260653 SDHAF2Q9NX18 166 aa18.48■□□□□ 0.55
SIX3-201ENST00000260653 ZNF462Q96JM2 2506 aa18.47■□□□□ 0.55
SIX3-201ENST00000260653 DUXBA0A1W2PPF3 345 aa18.47■□□□□ 0.55
SIX3-201ENST00000260653 ZNF134P52741 427 aa18.47■□□□□ 0.55
SIX3-201ENST00000260653 ZNF585BQ52M93 769 aa18.47■□□□□ 0.55
SIX3-201ENST00000260653 PLEKHF2Q9H8W4 249 aa18.47■□□□□ 0.55
SIX3-201ENST00000260653 DOPEY1Q5JWR5 2465 aa18.47■□□□□ 0.55
SIX3-201ENST00000260653 DEDDO75618 318 aa18.47■□□□□ 0.55
SIX3-201ENST00000260653 LY6HO94772 140 aa18.47■□□□□ 0.55
SIX3-201ENST00000260653 DANCRP0C864 163 aa18.47■□□□□ 0.55
SIX3-201ENST00000260653 ZNF273Q14593 569 aa18.47■□□□□ 0.55
SIX3-201ENST00000260653 Q3ZCU0 254 aa18.47■□□□□ 0.55
SIX3-201ENST00000260653 OR4D5Q8NGN0 318 aa18.47■□□□□ 0.55
SIX3-201ENST00000260653 A0A0G2JRQ6 117 aa18.46■□□□□ 0.55
SIX3-201ENST00000260653 hADV38S2A0JD32 116 aa18.46■□□□□ 0.55
SIX3-201ENST00000260653 HTR2BP41595 481 aa18.46■□□□□ 0.55
SIX3-201ENST00000260653 RPL31P62899 125 aaKnown RBP18.46■□□□□ 0.55
SIX3-201ENST00000260653 CORO2AQ92828 525 aa18.46■□□□□ 0.55
SIX3-201ENST00000260653 ZNF729A6NN14 1252 aaPredicted RBP18.46■□□□□ 0.55
SIX3-201ENST00000260653 RNF212BA8MTL3 300 aa18.46■□□□□ 0.55
SIX3-201ENST00000260653 K7EPK0 472 aa18.46■□□□□ 0.55
SIX3-201ENST00000260653 NDUFB3O43676 98 aa18.46■□□□□ 0.55
SIX3-201ENST00000260653 OR2B11Q5JQS5 317 aa18.46■□□□□ 0.55
SIX3-201ENST00000260653 PXDC1Q5TGL8 231 aa18.46■□□□□ 0.55
SIX3-201ENST00000260653 FAM71E2Q8N5Q1 922 aa18.46■□□□□ 0.55
SIX3-201ENST00000260653 RAB9BQ9NP90 201 aa18.46■□□□□ 0.55
SIX3-201ENST00000260653 GFOD1Q9NXC2 390 aa18.46■□□□□ 0.55
SIX3-201ENST00000260653 LINC00312Q9Y6C7 94 aa18.46■□□□□ 0.55
SIX3-201ENST00000260653 DVL1O14640 695 aa18.45■□□□□ 0.54
SIX3-201ENST00000260653 SLC31A2O15432 143 aa18.45■□□□□ 0.54
SIX3-201ENST00000260653 MMP23AO75900 390 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms