RNA–Protein interactions for RNA: ENST00000260595.9

CGREF1-201, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CGREF1, Length 1,177 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-201ENST00000260595 STEAP1Q9UHE8 339 aa13.14□□□□□ -0.31
CGREF1-201ENST00000260595 LSM4Q9Y4Z0 139 aaKnown RBP13.14□□□□□ -0.31
CGREF1-201ENST00000260595 FOXI3A8MTJ6 420 aaPredicted RBP13.13□□□□□ -0.31
CGREF1-201ENST00000260595 SOCS1O15524 211 aa13.13□□□□□ -0.31
CGREF1-201ENST00000260595 CT45A6P0DMU7 189 aa13.13□□□□□ -0.31
CGREF1-201ENST00000260595 CT45A5P0DMU8 189 aa13.13□□□□□ -0.31
CGREF1-201ENST00000260595 CT45A7P0DMV0 189 aa13.13□□□□□ -0.31
CGREF1-201ENST00000260595 RUNX1Q01196 453 aa13.13□□□□□ -0.31
CGREF1-201ENST00000260595 DCTN2Q13561 401 aaKnown RBP13.13□□□□□ -0.31
CGREF1-201ENST00000260595 TPBGQ13641 420 aa13.13□□□□□ -0.31
CGREF1-201ENST00000260595 RPL39P5Q59GN2 51 aa13.13□□□□□ -0.31
CGREF1-201ENST00000260595 C19orf54Q5BKX5 351 aa13.13□□□□□ -0.31
CGREF1-201ENST00000260595 LIPKQ5VXJ0 399 aa13.13□□□□□ -0.31
CGREF1-201ENST00000260595 MINDY2Q8NBR6 621 aa13.13□□□□□ -0.31
CGREF1-201ENST00000260595 TMEM203Q969S6 136 aa13.13□□□□□ -0.31
CGREF1-201ENST00000260595 AGMATQ9BSE5 352 aa13.13□□□□□ -0.31
CGREF1-201ENST00000260595 DUSP21Q9H596 190 aa13.13□□□□□ -0.31
CGREF1-201ENST00000260595 PARP11Q9NR21 331 aa13.13□□□□□ -0.31
CGREF1-201ENST00000260595 PLEKHJ1Q9NW61 149 aa13.13□□□□□ -0.31
CGREF1-201ENST00000260595 SCN3BQ9NY72 215 aa13.13□□□□□ -0.31
CGREF1-201ENST00000260595 PIPOXQ9P0Z9 390 aa13.13□□□□□ -0.31
CGREF1-201ENST00000260595 SLC23A1Q9UHI7 598 aa13.13□□□□□ -0.31
CGREF1-201ENST00000260595 KMT2CQ8NEZ4 4911 aaKnown RBP13.13□□□□□ -0.31
CGREF1-201ENST00000260595 TRAV41A0A0B4J266 112 aa13.12□□□□□ -0.31
CGREF1-201ENST00000260595 SEC14L6B5MCN3 397 aa13.12□□□□□ -0.31
CGREF1-201ENST00000260595 ITGB1BP1O14713 200 aa13.12□□□□□ -0.31
CGREF1-201ENST00000260595 RAB29O14966 203 aa13.12□□□□□ -0.31
CGREF1-201ENST00000260595 CRIP2P52943 208 aaPredicted RBP13.12□□□□□ -0.31
CGREF1-201ENST00000260595 TMEM50BP56557 158 aa13.12□□□□□ -0.31
CGREF1-201ENST00000260595 NDPQ00604 133 aa13.12□□□□□ -0.31
CGREF1-201ENST00000260595 TMEM65Q6PI78 240 aa13.12□□□□□ -0.31
CGREF1-201ENST00000260595 FAM131AQ6UXB0 335 aa13.12□□□□□ -0.31
CGREF1-201ENST00000260595 MOB1BQ7L9L4 216 aa13.12□□□□□ -0.31
CGREF1-201ENST00000260595 NRG4Q8WWG1 115 aa13.12□□□□□ -0.31
CGREF1-201ENST00000260595 UFD1Q92890 307 aa13.12□□□□□ -0.31
CGREF1-201ENST00000260595 HDHD3Q9BSH5 251 aaPredicted RBP13.12□□□□□ -0.31
CGREF1-201ENST00000260595 RIMS4Q9H426 269 aaPredicted RBP13.12□□□□□ -0.31
CGREF1-201ENST00000260595 CHMP1AQ9HD42 196 aaPredicted RBP13.12□□□□□ -0.31
CGREF1-201ENST00000260595 AK3Q9UIJ7 227 aa13.12□□□□□ -0.31
CGREF1-201ENST00000260595 VSIG4Q9Y279 399 aa13.12□□□□□ -0.31
CGREF1-201ENST00000260595 FBXO7Q9Y3I1 522 aa13.12□□□□□ -0.31
CGREF1-201ENST00000260595 H0YJW9 148 aa13.11□□□□□ -0.31
CGREF1-201ENST00000260595 SLC17A2O00624 439 aa13.11□□□□□ -0.31
CGREF1-201ENST00000260595 PROP1O75360 226 aa13.11□□□□□ -0.31
CGREF1-201ENST00000260595 RAB9AP51151 201 aa13.11□□□□□ -0.31
CGREF1-201ENST00000260595 AQP4P55087 323 aa13.11□□□□□ -0.31
CGREF1-201ENST00000260595 RPS25P62851 125 aaKnown RBP13.11□□□□□ -0.31
CGREF1-201ENST00000260595 GNB1P62873 340 aa13.11□□□□□ -0.31
CGREF1-201ENST00000260595 P2RY14Q15391 338 aa13.11□□□□□ -0.31
CGREF1-201ENST00000260595 GLDNQ6ZMI3 551 aaPredicted RBP13.11□□□□□ -0.31
CGREF1-201ENST00000260595 OR1N2Q8NGR9 330 aa13.11□□□□□ -0.31
CGREF1-201ENST00000260595 SETD6Q8TBK2 473 aa13.11□□□□□ -0.31
CGREF1-201ENST00000260595 ABHD14BQ96IU4 210 aa13.11□□□□□ -0.31
CGREF1-201ENST00000260595 PRR25Q96S07 402 aa13.11□□□□□ -0.31
CGREF1-201ENST00000260595 ISYNA1Q9NPH2 558 aa13.11□□□□□ -0.31
CGREF1-201ENST00000260595 OR1A1Q9P1Q5 309 aa13.11□□□□□ -0.31
CGREF1-201ENST00000260595 KIAA1456Q9P272 454 aa13.11□□□□□ -0.31
CGREF1-201ENST00000260595 HSF4Q9ULV5 492 aa13.11□□□□□ -0.31
CGREF1-201ENST00000260595 FCN1O00602 326 aa13.1□□□□□ -0.31
CGREF1-201ENST00000260595 RRHO14718 337 aa13.1□□□□□ -0.31
CGREF1-201ENST00000260595 SOX15O60248 233 aa13.1□□□□□ -0.31
CGREF1-201ENST00000260595 EGR2P11161 476 aaPredicted RBP13.1□□□□□ -0.31
CGREF1-201ENST00000260595 ARSBP15848 533 aa13.1□□□□□ -0.31
CGREF1-201ENST00000260595 ECI1P42126 302 aa13.1□□□□□ -0.31
CGREF1-201ENST00000260595 CX3CL1P78423 397 aa13.1□□□□□ -0.31
CGREF1-201ENST00000260595 ZNF260Q3ZCT1 412 aa13.1□□□□□ -0.31
CGREF1-201ENST00000260595 ZNF660Q6AZW8 331 aaPredicted RBP13.1□□□□□ -0.31
CGREF1-201ENST00000260595 OR5AN1Q8NGI8 311 aa13.1□□□□□ -0.31
CGREF1-201ENST00000260595 OR5B12Q96R08 314 aa13.1□□□□□ -0.31
CGREF1-201ENST00000260595 URM1Q9BTM9 101 aaKnown RBP13.1□□□□□ -0.31
CGREF1-201ENST00000260595 C11orf54Q9H0W9 315 aaPredicted RBP13.1□□□□□ -0.31
CGREF1-201ENST00000260595 GHITMQ9H3K2 345 aa13.1□□□□□ -0.31
CGREF1-201ENST00000260595 FBXL15Q9H469 300 aa13.1□□□□□ -0.31
CGREF1-201ENST00000260595 Q9N2K0 584 aa13.1□□□□□ -0.31
CGREF1-201ENST00000260595 TPRKBQ9Y3C4 175 aa13.1□□□□□ -0.31
CGREF1-201ENST00000260595 AK6Q9Y3D8 172 aaKnown RBP13.1□□□□□ -0.31
CGREF1-201ENST00000260595 OR5H14A6NHG9 310 aa13.09□□□□□ -0.31
CGREF1-201ENST00000260595 SCTP09683 121 aa13.09□□□□□ -0.31
CGREF1-201ENST00000260595 OR8U8P0C7N1 319 aa13.09□□□□□ -0.31
CGREF1-201ENST00000260595 HSMCR30P0CW71 290 aa13.09□□□□□ -0.31
CGREF1-201ENST00000260595 MC5RP33032 325 aa13.09□□□□□ -0.31
CGREF1-201ENST00000260595 CEACAM6P40199 344 aa13.09□□□□□ -0.31
CGREF1-201ENST00000260595 HLA-DRB3P79483 266 aa13.09□□□□□ -0.31
CGREF1-201ENST00000260595 ZNF616Q08AN1 781 aa13.09□□□□□ -0.31
CGREF1-201ENST00000260595 PTX4Q96A99 478 aa13.09□□□□□ -0.31
CGREF1-201ENST00000260595 WWC2-AS2Q96NR7 200 aa13.09□□□□□ -0.31
CGREF1-201ENST00000260595 PLGRKTQ9HBL7 147 aa13.09□□□□□ -0.31
CGREF1-201ENST00000260595 NUBP2Q9Y5Y2 271 aa13.09□□□□□ -0.31
CGREF1-201ENST00000260595 IGKV1-6A0A0C4DH72 117 aa13.08□□□□□ -0.32
CGREF1-201ENST00000260595 SNRPBP14678 240 aaKnown RBP13.08□□□□□ -0.32
CGREF1-201ENST00000260595 CPEP16870 476 aa13.08□□□□□ -0.32
CGREF1-201ENST00000260595 ZBTB25P24278 435 aa13.08□□□□□ -0.32
CGREF1-201ENST00000260595 MLLT11Q13015 90 aaPredicted RBP13.08□□□□□ -0.32
CGREF1-201ENST00000260595 TRAM1Q15629 374 aa13.08□□□□□ -0.32
CGREF1-201ENST00000260595 ECSCRQ19T08 205 aa13.08□□□□□ -0.32
CGREF1-201ENST00000260595 ARHGAP5-AS1Q96IT6 56 aa13.08□□□□□ -0.32
CGREF1-201ENST00000260595 RNF5Q99942 180 aa13.08□□□□□ -0.32
CGREF1-201ENST00000260595 PECRQ9BY49 303 aa13.08□□□□□ -0.32
CGREF1-201ENST00000260595 TPSG1Q9NRR2 321 aa13.08□□□□□ -0.32
CGREF1-201ENST00000260595 MGAT4AQ9UM21 535 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 148.6 ms