RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 CD36P16671 472 aa18.13■□□□□ 0.49
LSM4-201ENST00000252816 ZBTB25P24278 435 aa18.13■□□□□ 0.49
LSM4-201ENST00000252816 RPL39P5Q59GN2 51 aa18.13■□□□□ 0.49
LSM4-201ENST00000252816 FAM71E2Q8N5Q1 922 aa18.13■□□□□ 0.49
LSM4-201ENST00000252816 OR4X2Q8NGF9 303 aa18.13■□□□□ 0.49
LSM4-201ENST00000252816 OR8H1Q8NGG4 311 aa18.13■□□□□ 0.49
LSM4-201ENST00000252816 ABHD14BQ96IU4 210 aa18.13■□□□□ 0.49
LSM4-201ENST00000252816 RITA1Q96K30 269 aa18.13■□□□□ 0.49
LSM4-201ENST00000252816 KCTD7Q96MP8 289 aa18.13■□□□□ 0.49
LSM4-201ENST00000252816 C11orf54Q9H0W9 315 aaPredicted RBP18.13■□□□□ 0.49
LSM4-201ENST00000252816 DAPK2Q9UIK4 370 aa18.13■□□□□ 0.49
LSM4-201ENST00000252816 LOC100506127A0A0U1RQW1 187 aa18.12■□□□□ 0.49
LSM4-201ENST00000252816 PSMB11A5LHX3 300 aa18.12■□□□□ 0.49
LSM4-201ENST00000252816 METTL21EPA6NDL7 271 aa18.12■□□□□ 0.49
LSM4-201ENST00000252816 HSPA12AO43301 675 aa18.12■□□□□ 0.49
LSM4-201ENST00000252816 FCGR3AP08637 254 aa18.12■□□□□ 0.49
LSM4-201ENST00000252816 GPR12P47775 334 aa18.12■□□□□ 0.49
LSM4-201ENST00000252816 SFXN4Q6P4A7 337 aa18.12■□□□□ 0.49
LSM4-201ENST00000252816 CENPOQ9BU64 300 aa18.12■□□□□ 0.49
LSM4-201ENST00000252816 ATG5Q9H1Y0 275 aa18.12■□□□□ 0.49
LSM4-201ENST00000252816 PIPOXQ9P0Z9 390 aa18.12■□□□□ 0.49
LSM4-201ENST00000252816 RAB29O14966 203 aa18.11■□□□□ 0.49
LSM4-201ENST00000252816 SNRPBP14678 240 aaKnown RBP18.11■□□□□ 0.49
LSM4-201ENST00000252816 MXD1Q05195 221 aa18.11■□□□□ 0.49
LSM4-201ENST00000252816 FAM71F2Q6NXP2 309 aa18.11■□□□□ 0.49
LSM4-201ENST00000252816 C1QL4Q86Z23 238 aa18.11■□□□□ 0.49
LSM4-201ENST00000252816 OR4F17Q8NGA8 305 aa18.11■□□□□ 0.49
LSM4-201ENST00000252816 CHPT1Q8WUD6 406 aa18.11■□□□□ 0.49
LSM4-201ENST00000252816 OR4F4Q96R69 305 aa18.11■□□□□ 0.49
LSM4-201ENST00000252816 RASL11BQ9BPW5 248 aa18.11■□□□□ 0.49
LSM4-201ENST00000252816 ZNF230Q9UIE0 474 aaPredicted RBP18.11■□□□□ 0.49
LSM4-201ENST00000252816 ELF5Q9UKW6 265 aaPredicted RBP18.11■□□□□ 0.49
LSM4-201ENST00000252816 TSSC4Q9Y5U2 329 aaPredicted RBP18.11■□□□□ 0.49
LSM4-201ENST00000252816 NOTCH3Q9UM47 2321 aa18.1■□□□□ 0.49
LSM4-201ENST00000252816 FABP7O15540 132 aa18.1■□□□□ 0.49
LSM4-201ENST00000252816 CT45A6P0DMU7 189 aa18.1■□□□□ 0.49
LSM4-201ENST00000252816 CT45A5P0DMU8 189 aa18.1■□□□□ 0.49
LSM4-201ENST00000252816 CT45A7P0DMV0 189 aa18.1■□□□□ 0.49
LSM4-201ENST00000252816 CNTFRP26992 372 aa18.1■□□□□ 0.49
LSM4-201ENST00000252816 ACTBP60709 375 aa18.1■□□□□ 0.49
LSM4-201ENST00000252816 MRPS15P82914 257 aaKnown RBP18.1■□□□□ 0.49
LSM4-201ENST00000252816 FOXRED2Q8IWF2 684 aa18.1■□□□□ 0.49
LSM4-201ENST00000252816 STPG2Q8N412 459 aa18.1■□□□□ 0.49
LSM4-201ENST00000252816 EDARADDQ8WWZ3 215 aa18.1■□□□□ 0.49
LSM4-201ENST00000252816 MAFIPQ8WZ33 124 aa18.1■□□□□ 0.49
LSM4-201ENST00000252816 HSPB9Q9BQS6 159 aa18.1■□□□□ 0.49
LSM4-201ENST00000252816 GSTT2P0CG29 244 aa18.09■□□□□ 0.49
LSM4-201ENST00000252816 GSTT2BP0CG30 244 aa18.09■□□□□ 0.49
LSM4-201ENST00000252816 MMDQ15546 238 aa18.09■□□□□ 0.49
LSM4-201ENST00000252816 GLDNQ6ZMI3 551 aaPredicted RBP18.09■□□□□ 0.49
LSM4-201ENST00000252816 TSPAN14Q8NG11 270 aa18.09■□□□□ 0.49
LSM4-201ENST00000252816 OR4A4PQ8NGN8 299 aa18.09■□□□□ 0.49
LSM4-201ENST00000252816 LGALS14Q8TCE9 139 aa18.09■□□□□ 0.49
LSM4-201ENST00000252816 RDH8Q9NYR8 311 aa18.09■□□□□ 0.49
LSM4-201ENST00000252816 RNF150Q9ULK6 438 aa18.09■□□□□ 0.49
LSM4-201ENST00000252816 PLXNB1O43157 2135 aa18.08■□□□□ 0.49
LSM4-201ENST00000252816 AP4M1O00189 453 aa18.08■□□□□ 0.48
LSM4-201ENST00000252816 PROP1O75360 226 aa18.08■□□□□ 0.48
LSM4-201ENST00000252816 IGSF11Q5DX21 431 aa18.08■□□□□ 0.48
LSM4-201ENST00000252816 KHDC1LQ5JSQ8 128 aa18.08■□□□□ 0.48
LSM4-201ENST00000252816 FAM131AQ6UXB0 335 aa18.08■□□□□ 0.48
LSM4-201ENST00000252816 CABLES2Q9BTV7 478 aa18.08■□□□□ 0.48
LSM4-201ENST00000252816 A0A087WXM4 84 aa18.07■□□□□ 0.48
LSM4-201ENST00000252816 G3V4G9 280 aa18.07■□□□□ 0.48
LSM4-201ENST00000252816 TNFAIP8O95379 198 aa18.07■□□□□ 0.48
LSM4-201ENST00000252816 SOX6P35712 828 aa18.07■□□□□ 0.48
LSM4-201ENST00000252816 ARFRP1Q13795 201 aa18.07■□□□□ 0.48
LSM4-201ENST00000252816 KIR2DS1Q14954 304 aa18.07■□□□□ 0.48
LSM4-201ENST00000252816 CDNFQ49AH0 187 aa18.07■□□□□ 0.48
LSM4-201ENST00000252816 TOLLIPQ9H0E2 274 aa18.07■□□□□ 0.48
LSM4-201ENST00000252816 GHITMQ9H3K2 345 aa18.07■□□□□ 0.48
LSM4-201ENST00000252816 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.07■□□□□ 0.48
LSM4-201ENST00000252816 IGKV1D-8A0A087WSZ0 117 aa18.06■□□□□ 0.48
LSM4-201ENST00000252816 H0YJW9 148 aa18.06■□□□□ 0.48
LSM4-201ENST00000252816 BET1O15155 118 aa18.06■□□□□ 0.48
LSM4-201ENST00000252816 SERPINB10P48595 397 aa18.06■□□□□ 0.48
LSM4-201ENST00000252816 LINC00205P59089 165 aa18.06■□□□□ 0.48
LSM4-201ENST00000252816 OR5H6Q8NGV6 325 aa18.06■□□□□ 0.48
LSM4-201ENST00000252816 PHF21AQ96BD5 680 aa18.06■□□□□ 0.48
LSM4-201ENST00000252816 TRBV6-7A0A0A0MS04 114 aa18.05■□□□□ 0.48
LSM4-201ENST00000252816 PF4V1P10720 104 aa18.05■□□□□ 0.48
LSM4-201ENST00000252816 TGFBR1P36897 503 aa18.05■□□□□ 0.48
LSM4-201ENST00000252816 TALDO1P37837 337 aa18.05■□□□□ 0.48
LSM4-201ENST00000252816 SLC35B1P78383 322 aa18.05■□□□□ 0.48
LSM4-201ENST00000252816 IDNKQ5T6J7 187 aa18.05■□□□□ 0.48
LSM4-201ENST00000252816 DRAXINQ8NBI3 349 aaPredicted RBP18.05■□□□□ 0.48
LSM4-201ENST00000252816 OR5AN1Q8NGI8 311 aa18.05■□□□□ 0.48
LSM4-201ENST00000252816 YIPF6Q96EC8 236 aa18.05■□□□□ 0.48
LSM4-201ENST00000252816 ZNF107Q9UII5 783 aaPredicted RBP18.05■□□□□ 0.48
LSM4-201ENST00000252816 OR5H14A6NHG9 310 aa18.04■□□□□ 0.48
LSM4-201ENST00000252816 NBR2O15453 112 aa18.04■□□□□ 0.48
LSM4-201ENST00000252816 RPL23AP62750 156 aaKnown RBP18.04■□□□□ 0.48
LSM4-201ENST00000252816 ARL6IP1Q15041 203 aa18.04■□□□□ 0.48
LSM4-201ENST00000252816 SRSF7Q16629 238 aaKnown RBP eCLIP18.04■□□□□ 0.48
LSM4-201ENST00000252816 C5orf64Q2M2E5 130 aa18.04■□□□□ 0.48
LSM4-201ENST00000252816 SAMD5Q5TGI4 173 aa18.04■□□□□ 0.48
LSM4-201ENST00000252816 HACD4Q5VWC8 232 aa18.04■□□□□ 0.48
LSM4-201ENST00000252816 Q6ZS49 121 aa18.04■□□□□ 0.48
LSM4-201ENST00000252816 C18orf65Q6ZTR6 163 aa18.04■□□□□ 0.48
LSM4-201ENST00000252816 NPBQ8NG41 125 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms