RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 RAB29O14966 203 aa16.66■□□□□ 0.26
HCFC1R1-201ENST00000248089 PRB2P02812 416 aaPredicted RBP16.66■□□□□ 0.26
HCFC1R1-201ENST00000248089 CD3GP09693 182 aa16.66■□□□□ 0.26
HCFC1R1-201ENST00000248089 ZBTB25P24278 435 aa16.66■□□□□ 0.26
HCFC1R1-201ENST00000248089 SOX6P35712 828 aa16.66■□□□□ 0.26
HCFC1R1-201ENST00000248089 CEACAM6P40199 344 aa16.66■□□□□ 0.26
HCFC1R1-201ENST00000248089 ACTBP60709 375 aa16.66■□□□□ 0.26
HCFC1R1-201ENST00000248089 RPL23AP62750 156 aaKnown RBP16.66■□□□□ 0.26
HCFC1R1-201ENST00000248089 RPL39P5Q59GN2 51 aa16.66■□□□□ 0.26
HCFC1R1-201ENST00000248089 ZNF773Q6PK81 442 aa16.66■□□□□ 0.26
HCFC1R1-201ENST00000248089 ABHD14BQ96IU4 210 aa16.66■□□□□ 0.26
HCFC1R1-201ENST00000248089 PIPOXQ9P0Z9 390 aa16.66■□□□□ 0.26
HCFC1R1-201ENST00000248089 STUB1Q9UNE7 303 aa16.66■□□□□ 0.26
HCFC1R1-201ENST00000248089 PRKDCP78527 4128 aaKnown RBP16.65■□□□□ 0.26
HCFC1R1-201ENST00000248089 RRP9O43818 475 aaKnown RBP16.65■□□□□ 0.26
HCFC1R1-201ENST00000248089 GADD45AP24522 165 aa16.65■□□□□ 0.26
HCFC1R1-201ENST00000248089 CNTFRP26992 372 aa16.65■□□□□ 0.26
HCFC1R1-201ENST00000248089 FAM131AQ6UXB0 335 aa16.65■□□□□ 0.26
HCFC1R1-201ENST00000248089 NR2C2APQ86WQ0 139 aa16.65■□□□□ 0.26
HCFC1R1-201ENST00000248089 COMMD1Q8N668 190 aa16.65■□□□□ 0.26
HCFC1R1-201ENST00000248089 EDARADDQ8WWZ3 215 aa16.65■□□□□ 0.26
HCFC1R1-201ENST00000248089 ZNF251Q9BRH9 671 aa16.65■□□□□ 0.26
HCFC1R1-201ENST00000248089 TXNL4BQ9NX01 149 aaKnown RBP16.65■□□□□ 0.26
HCFC1R1-201ENST00000248089 ZNF107Q9UII5 783 aaPredicted RBP16.65■□□□□ 0.26
HCFC1R1-201ENST00000248089 IGLL1P15814 213 aa16.64■□□□□ 0.25
HCFC1R1-201ENST00000248089 GNB3P16520 340 aa16.64■□□□□ 0.25
HCFC1R1-201ENST00000248089 RAB6AP20340 208 aa16.64■□□□□ 0.25
HCFC1R1-201ENST00000248089 KPRPQ5T749 579 aaPredicted RBP16.64■□□□□ 0.25
HCFC1R1-201ENST00000248089 FAM71F2Q6NXP2 309 aa16.64■□□□□ 0.25
HCFC1R1-201ENST00000248089 C18orf65Q6ZTR6 163 aa16.64■□□□□ 0.25
HCFC1R1-201ENST00000248089 KLHL30-AS1Q8NEE0 82 aa16.64■□□□□ 0.25
HCFC1R1-201ENST00000248089 OR10R2Q8NGX6 335 aa16.64■□□□□ 0.25
HCFC1R1-201ENST00000248089 RITA1Q96K30 269 aa16.64■□□□□ 0.25
HCFC1R1-201ENST00000248089 GON7Q9BXV9 100 aa16.64■□□□□ 0.25
HCFC1R1-201ENST00000248089 KCNK7Q9Y2U2 307 aa16.64■□□□□ 0.25
HCFC1R1-201ENST00000248089 RRP15Q9Y3B9 282 aaKnown RBP16.64■□□□□ 0.25
HCFC1R1-201ENST00000248089 TRDCB7Z8K6 153 aa16.63■□□□□ 0.25
HCFC1R1-201ENST00000248089 TEX38Q6PEX7 206 aa16.63■□□□□ 0.25
HCFC1R1-201ENST00000248089 GLDNQ6ZMI3 551 aaPredicted RBP16.63■□□□□ 0.25
HCFC1R1-201ENST00000248089 C8orf86Q6ZUL3 223 aa16.63■□□□□ 0.25
HCFC1R1-201ENST00000248089 PHF21AQ96BD5 680 aa16.63■□□□□ 0.25
HCFC1R1-201ENST00000248089 C11orf54Q9H0W9 315 aaPredicted RBP16.63■□□□□ 0.25
HCFC1R1-201ENST00000248089 RNF150Q9ULK6 438 aa16.63■□□□□ 0.25
HCFC1R1-201ENST00000248089 SSR3Q9UNL2 185 aa16.63■□□□□ 0.25
HCFC1R1-201ENST00000248089 IGKV1-6A0A0C4DH72 117 aa16.62■□□□□ 0.25
HCFC1R1-201ENST00000248089 METTL21EPA6NDL7 271 aa16.62■□□□□ 0.25
HCFC1R1-201ENST00000248089 ITGB1BP1O14713 200 aa16.62■□□□□ 0.25
HCFC1R1-201ENST00000248089 NBR2O15453 112 aa16.62■□□□□ 0.25
HCFC1R1-201ENST00000248089 FCGR3AP08637 254 aa16.62■□□□□ 0.25
HCFC1R1-201ENST00000248089 HIST1H1DP16402 221 aaKnown RBP16.62■□□□□ 0.25
HCFC1R1-201ENST00000248089 VDAC1P21796 283 aa16.62■□□□□ 0.25
HCFC1R1-201ENST00000248089 FGF9P31371 208 aaPredicted RBP16.62■□□□□ 0.25
HCFC1R1-201ENST00000248089 NEDD8Q15843 81 aa16.62■□□□□ 0.25
HCFC1R1-201ENST00000248089 PNLIPRP3Q17RR3 467 aa16.62■□□□□ 0.25
HCFC1R1-201ENST00000248089 LCNL1Q6ZST4 164 aa16.62■□□□□ 0.25
HCFC1R1-201ENST00000248089 MAFIPQ8WZ33 124 aa16.62■□□□□ 0.25
HCFC1R1-201ENST00000248089 ATG5Q9H1Y0 275 aa16.62■□□□□ 0.25
HCFC1R1-201ENST00000248089 KIAA1456Q9P272 454 aa16.62■□□□□ 0.25
HCFC1R1-201ENST00000248089 NOTOA8MTQ0 251 aa16.61■□□□□ 0.25
HCFC1R1-201ENST00000248089 H7C2Y5 167 aa16.61■□□□□ 0.25
HCFC1R1-201ENST00000248089 RAB27BO00194 218 aa16.61■□□□□ 0.25
HCFC1R1-201ENST00000248089 MFNGO00587 321 aa16.61■□□□□ 0.25
HCFC1R1-201ENST00000248089 BET1O15155 118 aa16.61■□□□□ 0.25
HCFC1R1-201ENST00000248089 CT45A6P0DMU7 189 aa16.61■□□□□ 0.25
HCFC1R1-201ENST00000248089 CT45A5P0DMU8 189 aa16.61■□□□□ 0.25
HCFC1R1-201ENST00000248089 CT45A7P0DMV0 189 aa16.61■□□□□ 0.25
HCFC1R1-201ENST00000248089 ARFRP1Q13795 201 aa16.61■□□□□ 0.25
HCFC1R1-201ENST00000248089 CXorf66Q5JRM2 361 aaPredicted RBP16.61■□□□□ 0.25
HCFC1R1-201ENST00000248089 ETV3LQ6ZN32 361 aa16.61■□□□□ 0.25
HCFC1R1-201ENST00000248089 OR4A4PQ8NGN8 299 aa16.61■□□□□ 0.25
HCFC1R1-201ENST00000248089 CHCHD6Q9BRQ6 235 aa16.61■□□□□ 0.25
HCFC1R1-201ENST00000248089 AGMATQ9BSE5 352 aa16.61■□□□□ 0.25
HCFC1R1-201ENST00000248089 OR51E2Q9H255 320 aa16.61■□□□□ 0.25
HCFC1R1-201ENST00000248089 ZFP57Q9NU63 452 aa16.61■□□□□ 0.25
HCFC1R1-201ENST00000248089 RDH8Q9NYR8 311 aa16.61■□□□□ 0.25
HCFC1R1-201ENST00000248089 OR5H14A6NHG9 310 aa16.6■□□□□ 0.25
HCFC1R1-201ENST00000248089 FABP7O15540 132 aa16.6■□□□□ 0.25
HCFC1R1-201ENST00000248089 RPLP1P05386 114 aaKnown RBP16.6■□□□□ 0.25
HCFC1R1-201ENST00000248089 DRAXINQ8NBI3 349 aaPredicted RBP16.6■□□□□ 0.25
HCFC1R1-201ENST00000248089 WFDC9Q8NEX5 89 aa16.6■□□□□ 0.25
HCFC1R1-201ENST00000248089 GHITMQ9H3K2 345 aa16.6■□□□□ 0.25
HCFC1R1-201ENST00000248089 PARP11Q9NR21 331 aa16.6■□□□□ 0.25
HCFC1R1-201ENST00000248089 ZNF230Q9UIE0 474 aaPredicted RBP16.6■□□□□ 0.25
HCFC1R1-201ENST00000248089 DAPK2Q9UIK4 370 aa16.6■□□□□ 0.25
HCFC1R1-201ENST00000248089 ZNF221Q9UK13 617 aa16.6■□□□□ 0.25
HCFC1R1-201ENST00000248089 LOC100506127A0A0U1RQW1 187 aa16.59■□□□□ 0.25
HCFC1R1-201ENST00000248089 H0YJW9 148 aa16.59■□□□□ 0.25
HCFC1R1-201ENST00000248089 HLA-DRB1P01911 266 aa16.59■□□□□ 0.25
HCFC1R1-201ENST00000248089 TALDO1P37837 337 aa16.59■□□□□ 0.25
HCFC1R1-201ENST00000248089 MXD1Q05195 221 aa16.59■□□□□ 0.25
HCFC1R1-201ENST00000248089 FOXE3Q13461 319 aa16.59■□□□□ 0.25
HCFC1R1-201ENST00000248089 KIR2DS1Q14954 304 aa16.59■□□□□ 0.25
HCFC1R1-201ENST00000248089 PLGLAQ15195 96 aa16.59■□□□□ 0.25
HCFC1R1-201ENST00000248089 C5orf64Q2M2E5 130 aa16.59■□□□□ 0.25
HCFC1R1-201ENST00000248089 IGSF11Q5DX21 431 aa16.59■□□□□ 0.25
HCFC1R1-201ENST00000248089 TPRA1Q86W33 373 aa16.59■□□□□ 0.25
HCFC1R1-201ENST00000248089 ZNF695Q8IW36 515 aa16.59■□□□□ 0.25
HCFC1R1-201ENST00000248089 LINC00482Q8N8I6 264 aa16.59■□□□□ 0.25
HCFC1R1-201ENST00000248089 PTX4Q96A99 478 aa16.59■□□□□ 0.25
HCFC1R1-201ENST00000248089 KCTD7Q96MP8 289 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms