RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 YPEL2Q96QA6 119 aa9.16□□□□□ -0.94
TNFAIP3-201ENST00000237289 ENY2Q9NPA8 101 aa9.16□□□□□ -0.94
TNFAIP3-201ENST00000237289 ZFP36P26651 326 aaKnown RBP9.16□□□□□ -0.94
TNFAIP3-201ENST00000237289 CRIP3Q6Q6R5 217 aa9.16□□□□□ -0.94
TNFAIP3-201ENST00000237289 Q71RC1 249 aaPredicted RBP9.16□□□□□ -0.94
TNFAIP3-201ENST00000237289 ZBTB34Q8NCN2 500 aa9.16□□□□□ -0.94
TNFAIP3-201ENST00000237289 RTN4IP1Q8WWV3 396 aaPredicted RBP9.16□□□□□ -0.94
TNFAIP3-201ENST00000237289 CORO2AQ92828 525 aa9.16□□□□□ -0.94
TNFAIP3-201ENST00000237289 HINT2Q9BX68 163 aa9.16□□□□□ -0.94
TNFAIP3-201ENST00000237289 CCL28Q9NRJ3 127 aa9.16□□□□□ -0.94
TNFAIP3-201ENST00000237289 IGHV2-26A0A0B4J1V2 119 aa9.16□□□□□ -0.94
TNFAIP3-201ENST00000237289 MPPED1O15442 326 aa9.16□□□□□ -0.94
TNFAIP3-201ENST00000237289 RAB13P51153 203 aa9.16□□□□□ -0.94
TNFAIP3-201ENST00000237289 KLRD1Q13241 179 aa9.16□□□□□ -0.94
TNFAIP3-201ENST00000237289 SRSF7Q16629 238 aaKnown RBP eCLIP9.16□□□□□ -0.94
TNFAIP3-201ENST00000237289 LYSMD2Q8IV50 215 aa9.16□□□□□ -0.94
TNFAIP3-201ENST00000237289 ZNF418Q8TF45 676 aaPredicted RBP9.16□□□□□ -0.94
TNFAIP3-201ENST00000237289 SLC35D1Q9NTN3 355 aa9.16□□□□□ -0.94
TNFAIP3-201ENST00000237289 J3QR06 171 aa9.15□□□□□ -0.94
TNFAIP3-201ENST00000237289 TCRBP04435 133 aa9.15□□□□□ -0.94
TNFAIP3-201ENST00000237289 GNMTQ14749 295 aa9.15□□□□□ -0.94
TNFAIP3-201ENST00000237289 SLC9A3R2Q15599 337 aa9.15□□□□□ -0.94
TNFAIP3-201ENST00000237289 MORN2Q502X0 79 aa9.15□□□□□ -0.94
TNFAIP3-201ENST00000237289 OVCH2Q7RTZ1 564 aa9.15□□□□□ -0.94
TNFAIP3-201ENST00000237289 LANCL1O43813 399 aa9.15□□□□□ -0.94
TNFAIP3-201ENST00000237289 FCGR3BO75015 233 aa9.15□□□□□ -0.94
TNFAIP3-201ENST00000237289 PTTG1O95997 202 aa9.15□□□□□ -0.94
TNFAIP3-201ENST00000237289 CCBE1Q6UXH8 406 aaPredicted RBP9.15□□□□□ -0.94
TNFAIP3-201ENST00000237289 KIR3DL3Q8N743 410 aa9.15□□□□□ -0.94
TNFAIP3-201ENST00000237289 CD300LFQ8TDQ1 290 aa9.15□□□□□ -0.94
TNFAIP3-201ENST00000237289 TNFRSF14Q92956 283 aa9.15□□□□□ -0.94
TNFAIP3-201ENST00000237289 MBNL3Q9NUK0 354 aaKnown RBP9.15□□□□□ -0.94
TNFAIP3-201ENST00000237289 THBS3P49746 956 aa9.15□□□□□ -0.94
TNFAIP3-201ENST00000237289 MINDY2Q8NBR6 621 aa9.15□□□□□ -0.94
TNFAIP3-201ENST00000237289 PHB2Q99623 299 aa9.15□□□□□ -0.94
TNFAIP3-201ENST00000237289 HSD17B10Q99714 261 aaKnown RBP9.15□□□□□ -0.94
TNFAIP3-201ENST00000237289 MED28Q9H204 178 aa9.15□□□□□ -0.94
TNFAIP3-201ENST00000237289 C1RLQ9NZP8 487 aa9.15□□□□□ -0.94
TNFAIP3-201ENST00000237289 COMMD9Q9P000 198 aa9.15□□□□□ -0.94
TNFAIP3-201ENST00000237289 TRBV6-7A0A0A0MS04 114 aa9.15□□□□□ -0.95
TNFAIP3-201ENST00000237289 C13orf42A0A1B0GVH6 325 aa9.15□□□□□ -0.95
TNFAIP3-201ENST00000237289 HLA-AP01891 365 aaKnown RBP9.15□□□□□ -0.95
TNFAIP3-201ENST00000237289 FAM106CPP0CH98 169 aa9.15□□□□□ -0.95
TNFAIP3-201ENST00000237289 SRPXP78539 464 aa9.15□□□□□ -0.95
TNFAIP3-201ENST00000237289 ASAH1Q13510 395 aa9.15□□□□□ -0.95
TNFAIP3-201ENST00000237289 C1orf122Q6ZSJ8 110 aa9.15□□□□□ -0.95
TNFAIP3-201ENST00000237289 GAPTQ8N292 157 aa9.15□□□□□ -0.95
TNFAIP3-201ENST00000237289 PITPNC1Q9UKF7 332 aa9.15□□□□□ -0.95
TNFAIP3-201ENST00000237289 TXNL1O43396 289 aa9.14□□□□□ -0.95
TNFAIP3-201ENST00000237289 CREBL2O60519 120 aaPredicted RBP9.14□□□□□ -0.95
TNFAIP3-201ENST00000237289 SRD5A1P18405 259 aa9.14□□□□□ -0.95
TNFAIP3-201ENST00000237289 BRD3OSQ6XYD6 125 aa9.14□□□□□ -0.95
TNFAIP3-201ENST00000237289 SPAG16Q8N0X2 631 aa9.14□□□□□ -0.95
TNFAIP3-201ENST00000237289 TRIM63Q969Q1 353 aa9.14□□□□□ -0.95
TNFAIP3-201ENST00000237289 HIVEP2P31629 2446 aa9.14□□□□□ -0.95
TNFAIP3-201ENST00000237289 CNIH1O95406 144 aa9.14□□□□□ -0.95
TNFAIP3-201ENST00000237289 RBP4P02753 201 aa9.14□□□□□ -0.95
TNFAIP3-201ENST00000237289 RPA2P15927 270 aa9.14□□□□□ -0.95
TNFAIP3-201ENST00000237289 KIR2DS2P43631 304 aa9.14□□□□□ -0.95
TNFAIP3-201ENST00000237289 BCAP31P51572 246 aa9.14□□□□□ -0.95
TNFAIP3-201ENST00000237289 AKR1D1P51857 326 aa9.14□□□□□ -0.95
TNFAIP3-201ENST00000237289 SMCO1Q147U7 214 aa9.14□□□□□ -0.95
TNFAIP3-201ENST00000237289 ZNF841Q6ZN19 808 aa9.14□□□□□ -0.95
TNFAIP3-201ENST00000237289 NRARPQ7Z6K4 114 aa9.14□□□□□ -0.95
TNFAIP3-201ENST00000237289 OR13C8Q8NGS7 320 aa9.14□□□□□ -0.95
TNFAIP3-201ENST00000237289 F5H0A9 414 aaPredicted RBP9.14□□□□□ -0.95
TNFAIP3-201ENST00000237289 CD34P28906 385 aa9.14□□□□□ -0.95
TNFAIP3-201ENST00000237289 MC5RP33032 325 aa9.14□□□□□ -0.95
TNFAIP3-201ENST00000237289 KLF9Q13886 244 aaPredicted RBP9.14□□□□□ -0.95
TNFAIP3-201ENST00000237289 SURF2Q15527 256 aaPredicted RBP9.14□□□□□ -0.95
TNFAIP3-201ENST00000237289 MSMO1Q15800 293 aa9.14□□□□□ -0.95
TNFAIP3-201ENST00000237289 SSX9Q7RTT3 188 aa9.14□□□□□ -0.95
TNFAIP3-201ENST00000237289 ZNF645Q8N7E2 425 aa9.14□□□□□ -0.95
TNFAIP3-201ENST00000237289 IGHV3-72A0A0B4J1Y9 119 aa9.13□□□□□ -0.95
TNFAIP3-201ENST00000237289 NPFFO15130 113 aa9.13□□□□□ -0.95
TNFAIP3-201ENST00000237289 IGHV4-31P0DP07 118 aa9.13□□□□□ -0.95
TNFAIP3-201ENST00000237289 MECP2P51608 486 aaKnown RBP9.13□□□□□ -0.95
TNFAIP3-201ENST00000237289 UBE2E1P51965 193 aa9.13□□□□□ -0.95
TNFAIP3-201ENST00000237289 ZNF816Q0VGE8 651 aaPredicted RBP9.13□□□□□ -0.95
TNFAIP3-201ENST00000237289 VMA21Q3ZAQ7 101 aa9.13□□□□□ -0.95
TNFAIP3-201ENST00000237289 BIVMQ86UB2 503 aa9.13□□□□□ -0.95
TNFAIP3-201ENST00000237289 H1FOOQ8IZA3 346 aaPredicted RBP9.13□□□□□ -0.95
TNFAIP3-201ENST00000237289 UPRTQ96BW1 309 aa9.13□□□□□ -0.95
TNFAIP3-201ENST00000237289 CENPEQ02224 2701 aa9.13□□□□□ -0.95
TNFAIP3-201ENST00000237289 ANKRD17O75179 2603 aaKnown RBP9.13□□□□□ -0.95
TNFAIP3-201ENST00000237289 VWC2LB2RUY7 222 aa9.13□□□□□ -0.95
TNFAIP3-201ENST00000237289 HRASP01112 189 aa9.13□□□□□ -0.95
TNFAIP3-201ENST00000237289 IFNA2P01563 188 aa9.13□□□□□ -0.95
TNFAIP3-201ENST00000237289 RRASP10301 218 aa9.13□□□□□ -0.95
TNFAIP3-201ENST00000237289 RAB14P61106 215 aa9.13□□□□□ -0.95
TNFAIP3-201ENST00000237289 ZFP69Q49AA0 526 aa9.13□□□□□ -0.95
TNFAIP3-201ENST00000237289 OR4D10Q8NGI6 311 aa9.13□□□□□ -0.95
TNFAIP3-201ENST00000237289 OR4S2Q8NH73 311 aa9.13□□□□□ -0.95
TNFAIP3-201ENST00000237289 MOB3AQ96BX8 217 aa9.13□□□□□ -0.95
TNFAIP3-201ENST00000237289 FLYWCH2Q96CP2 140 aaKnown RBP9.13□□□□□ -0.95
TNFAIP3-201ENST00000237289 C20orf85Q9H1P6 137 aa9.13□□□□□ -0.95
TNFAIP3-201ENST00000237289 GSKIPQ9P0R6 139 aa9.13□□□□□ -0.95
TNFAIP3-201ENST00000237289 ABCA1O95477 2261 aa9.13□□□□□ -0.95
TNFAIP3-201ENST00000237289 YLPM1P49750 1951 aaKnown RBP9.13□□□□□ -0.95
TNFAIP3-201ENST00000237289 IGKV1D-8A0A087WSZ0 117 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms