RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 RND3P61587 244 aa9.94□□□□□ -0.82
TNFAIP1-201ENST00000226225 MRGPRGQ86SM5 289 aa9.94□□□□□ -0.82
TNFAIP1-201ENST00000226225 ZNF573Q86YE8 665 aa9.94□□□□□ -0.82
TNFAIP1-201ENST00000226225 OSR2Q8N2R0 312 aa9.94□□□□□ -0.82
TNFAIP1-201ENST00000226225 PTX4Q96A99 478 aa9.94□□□□□ -0.82
TNFAIP1-201ENST00000226225 PECRQ9BY49 303 aa9.94□□□□□ -0.82
TNFAIP1-201ENST00000226225 PRDM13Q9H4Q3 707 aa9.94□□□□□ -0.82
TNFAIP1-201ENST00000226225 GNG13Q9P2W3 67 aa9.94□□□□□ -0.82
TNFAIP1-201ENST00000226225 RBFOX3A6NFN3 312 aa9.93□□□□□ -0.82
TNFAIP1-201ENST00000226225 ZNF124Q15973 351 aa9.93□□□□□ -0.82
TNFAIP1-201ENST00000226225 FIP1L1Q6UN15 594 aaKnown RBP9.93□□□□□ -0.82
TNFAIP1-201ENST00000226225 ZNF826PQ6ZT77 177 aa9.93□□□□□ -0.82
TNFAIP1-201ENST00000226225 PRR18Q8N4B5 295 aa9.93□□□□□ -0.82
TNFAIP1-201ENST00000226225 LIME1Q9H400 295 aa9.93□□□□□ -0.82
TNFAIP1-201ENST00000226225 OPA3Q9H6K4 179 aa9.93□□□□□ -0.82
TNFAIP1-201ENST00000226225 TUBA4BQ9H853 241 aa9.93□□□□□ -0.82
TNFAIP1-201ENST00000226225 VSTM5A8MXK1 200 aa9.93□□□□□ -0.82
TNFAIP1-201ENST00000226225 ST8SIA5O15466 376 aa9.93□□□□□ -0.82
TNFAIP1-201ENST00000226225 BCL3P20749 454 aa9.93□□□□□ -0.82
TNFAIP1-201ENST00000226225 GUSBP1Q15486 140 aa9.93□□□□□ -0.82
TNFAIP1-201ENST00000226225 CEACAM21Q3KPI0 293 aa9.93□□□□□ -0.82
TNFAIP1-201ENST00000226225 COLCA1Q6ZS62 124 aa9.93□□□□□ -0.82
TNFAIP1-201ENST00000226225 FRZBQ92765 325 aa9.93□□□□□ -0.82
TNFAIP1-201ENST00000226225 E5RGE8 158 aa9.93□□□□□ -0.82
TNFAIP1-201ENST00000226225 IGKV3-15P01624 115 aa9.93□□□□□ -0.82
TNFAIP1-201ENST00000226225 ZNF728P0DKX0 622 aa9.93□□□□□ -0.82
TNFAIP1-201ENST00000226225 RAC2P15153 192 aa9.93□□□□□ -0.82
TNFAIP1-201ENST00000226225 FGF8P55075 233 aaPredicted RBP9.93□□□□□ -0.82
TNFAIP1-201ENST00000226225 RPL23AP62750 156 aaKnown RBP9.93□□□□□ -0.82
TNFAIP1-201ENST00000226225 GNMTQ14749 295 aa9.93□□□□□ -0.82
TNFAIP1-201ENST00000226225 PRAMEF6Q5VXH4 476 aa9.93□□□□□ -0.82
TNFAIP1-201ENST00000226225 WDR25Q64LD2 544 aaPredicted RBP9.93□□□□□ -0.82
TNFAIP1-201ENST00000226225 C22orf34Q6ZV56 151 aa9.93□□□□□ -0.82
TNFAIP1-201ENST00000226225 LYPD6Q86Y78 171 aa9.93□□□□□ -0.82
TNFAIP1-201ENST00000226225 RNASE11Q8TAA1 199 aaKnown RBP9.93□□□□□ -0.82
TNFAIP1-201ENST00000226225 PACRGQ96M98 296 aaPredicted RBP9.93□□□□□ -0.82
TNFAIP1-201ENST00000226225 ERRFI1Q9UJM3 462 aaPredicted RBP9.93□□□□□ -0.82
TNFAIP1-201ENST00000226225 NSG2Q9Y328 171 aa9.93□□□□□ -0.82
TNFAIP1-201ENST00000226225 MPC1Q9Y5U8 109 aa9.93□□□□□ -0.82
TNFAIP1-201ENST00000226225 EPHA1P21709 976 aa9.92□□□□□ -0.82
TNFAIP1-201ENST00000226225 KLF3P57682 345 aaPredicted RBP9.92□□□□□ -0.82
TNFAIP1-201ENST00000226225 NIPSNAP3BQ9BS92 247 aa9.92□□□□□ -0.82
TNFAIP1-201ENST00000226225 SMCO3A2RU48 225 aa9.92□□□□□ -0.82
TNFAIP1-201ENST00000226225 ATP6V0CP27449 155 aa9.92□□□□□ -0.82
TNFAIP1-201ENST00000226225 CFPP27918 469 aa9.92□□□□□ -0.82
TNFAIP1-201ENST00000226225 ELOBQ15370 118 aa9.92□□□□□ -0.82
TNFAIP1-201ENST00000226225 DEFB108BQ8NET1 73 aa9.92□□□□□ -0.82
TNFAIP1-201ENST00000226225 GTF3AQ92664 365 aaKnown RBP9.92□□□□□ -0.82
TNFAIP1-201ENST00000226225 TAAR3PQ9P1P4 343 aa9.92□□□□□ -0.82
TNFAIP1-201ENST00000226225 WSB1Q9Y6I7 421 aa9.92□□□□□ -0.82
TNFAIP1-201ENST00000226225 ZG16O60844 167 aa9.92□□□□□ -0.82
TNFAIP1-201ENST00000226225 RHBDL1O75783 438 aa9.92□□□□□ -0.82
TNFAIP1-201ENST00000226225 SCGNO76038 276 aa9.92□□□□□ -0.82
TNFAIP1-201ENST00000226225 CD40P25942 277 aa9.92□□□□□ -0.82
TNFAIP1-201ENST00000226225 CA7P43166 264 aa9.92□□□□□ -0.82
TNFAIP1-201ENST00000226225 P2RY1P47900 373 aa9.92□□□□□ -0.82
TNFAIP1-201ENST00000226225 LCN15Q6UWW0 184 aa9.92□□□□□ -0.82
TNFAIP1-201ENST00000226225 ZCCHC24Q8N2G6 241 aaKnown RBP9.92□□□□□ -0.82
TNFAIP1-201ENST00000226225 OR5A2Q8NGI9 324 aa9.92□□□□□ -0.82
TNFAIP1-201ENST00000226225 C1orf147Q96MC9 270 aaPredicted RBP9.92□□□□□ -0.82
TNFAIP1-201ENST00000226225 DYNLRB1Q9NP97 96 aa9.92□□□□□ -0.82
TNFAIP1-201ENST00000226225 GAB2Q9UQC2 676 aa9.92□□□□□ -0.82
TNFAIP1-201ENST00000226225 HMGB3O15347 200 aaKnown RBP9.91□□□□□ -0.82
TNFAIP1-201ENST00000226225 IL15RAQ13261 267 aa9.91□□□□□ -0.82
TNFAIP1-201ENST00000226225 MPV17LQ2QL34 196 aa9.91□□□□□ -0.82
TNFAIP1-201ENST00000226225 ST6GALNAC3Q8NDV1 305 aa9.91□□□□□ -0.82
TNFAIP1-201ENST00000226225 PRORYQ9H606 182 aa9.91□□□□□ -0.82
TNFAIP1-201ENST00000226225 IL36RNQ9UBH0 155 aa9.91□□□□□ -0.82
TNFAIP1-201ENST00000226225 POMT1Q9Y6A1 747 aa9.91□□□□□ -0.82
TNFAIP1-201ENST00000226225 SIRPB1O00241 398 aa9.91□□□□□ -0.82
TNFAIP1-201ENST00000226225 ST8SIA3O43173 380 aa9.91□□□□□ -0.82
TNFAIP1-201ENST00000226225 LYL1P12980 280 aa9.91□□□□□ -0.82
TNFAIP1-201ENST00000226225 GNLYP22749 145 aa9.91□□□□□ -0.82
TNFAIP1-201ENST00000226225 GRNP28799 593 aaKnown RBP9.91□□□□□ -0.82
TNFAIP1-201ENST00000226225 CHRNB4P30926 498 aa9.91□□□□□ -0.82
TNFAIP1-201ENST00000226225 VAMP2P63027 116 aa9.91□□□□□ -0.82
TNFAIP1-201ENST00000226225 BSPH1Q075Z2 132 aa9.91□□□□□ -0.82
TNFAIP1-201ENST00000226225 LHFPL1Q86WI0 220 aa9.91□□□□□ -0.82
TNFAIP1-201ENST00000226225 SPSB4Q96A44 273 aa9.91□□□□□ -0.82
TNFAIP1-201ENST00000226225 ZNF462Q96JM2 2506 aa9.91□□□□□ -0.82
TNFAIP1-201ENST00000226225 IFNL4K9M1U5 179 aa9.9□□□□□ -0.82
TNFAIP1-201ENST00000226225 HIST1H1BP16401 226 aaKnown RBP9.9□□□□□ -0.82
TNFAIP1-201ENST00000226225 MPZP25189 248 aa9.9□□□□□ -0.82
TNFAIP1-201ENST00000226225 ALDH3B1P43353 468 aa9.9□□□□□ -0.82
TNFAIP1-201ENST00000226225 UQCRFS1P47985 274 aa9.9□□□□□ -0.82
TNFAIP1-201ENST00000226225 SSTP61278 116 aa9.9□□□□□ -0.82
TNFAIP1-201ENST00000226225 HOXA4Q00056 320 aaPredicted RBP9.9□□□□□ -0.82
TNFAIP1-201ENST00000226225 OR5C1Q8NGR4 320 aa9.9□□□□□ -0.82
TNFAIP1-201ENST00000226225 PLEKHA2Q9HB19 425 aa9.9□□□□□ -0.82
TNFAIP1-201ENST00000226225 IGKV1-12A0A0C4DH73 117 aa9.9□□□□□ -0.82
TNFAIP1-201ENST00000226225 GPR137BO60478 399 aa9.9□□□□□ -0.82
TNFAIP1-201ENST00000226225 IGKV1D-12P01611 117 aa9.9□□□□□ -0.82
TNFAIP1-201ENST00000226225 IGLV3-1P01715 115 aa9.9□□□□□ -0.82
TNFAIP1-201ENST00000226225 GAPDHP04406 335 aaKnown RBP9.9□□□□□ -0.82
TNFAIP1-201ENST00000226225 SEC11BP0C7V7 166 aa9.9□□□□□ -0.82
TNFAIP1-201ENST00000226225 GABRA2P47869 451 aa9.9□□□□□ -0.82
TNFAIP1-201ENST00000226225 EWSR1Q01844 656 aaKnown RBP eCLIP9.9□□□□□ -0.82
TNFAIP1-201ENST00000226225 FAM210BQ96KR6 192 aa9.9□□□□□ -0.82
TNFAIP1-201ENST00000226225 TECTBQ96PL2 329 aa9.9□□□□□ -0.82
TNFAIP1-201ENST00000226225 SCRT1Q9BWW7 348 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms