RNA–Protein interactions for RNA: ENSMUST00000159405.2

Pcdh1-202, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 5 BASIC

Gene Pcdh1, Length 3,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-202ENSMUST00000159405 Tp53rkQ99PW4 244 aa10.88□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Nsa2Q9CR47 260 aaKnown RBP10.88□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Mrps30Q9D0G0 442 aaKnown RBP10.88□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Qtrt1Q9JMA2 403 aa10.88□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Ccpg1osV9GXK1 122 aa10.88□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Riiad1Q3KNY5 119 aa10.88□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Rnf223Q3UV31 285 aa10.88□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Olfr1133Q7TR44 313 aa10.88□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Q8BTC1 67 aa10.88□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 AmtQ8CFA2 403 aaKnown RBP10.88□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Ly6g6eQ8K1T6 166 aa10.88□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Abhd14bQ8VCR7 210 aa10.88□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Tmem144Q8VEH0 348 aa10.88□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Rab30Q923S9 203 aa10.88□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Cby1Q9D1C2 127 aa10.88□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Plekha2Q9ERS5 425 aa10.88□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 MokQ9WVS4 420 aa10.88□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Olfr1157A2AVC4 312 aa10.88□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Gm3573L7N292 184 aa10.88□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Dbil5O09035 87 aa10.88□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Entpd2O55026 495 aa10.88□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Tgfbr3O88393 850 aa10.88□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 MpzP27573 248 aa10.88□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Lrrc30Q3UV48 300 aa10.88□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Slc16a11Q5NC32 447 aa10.88□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Olfr193Q7TS43 309 aa10.88□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Rnf24Q8BGI1 148 aa10.88□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Gm9837Q8C607 126 aa10.88□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Ppp1r3bQ8C767 284 aa10.88□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Rnf170Q8CBG9 286 aa10.88□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Olfr1440Q8VFV4 315 aa10.88□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Slc7a13Q91WN3 478 aa10.88□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Kcne3Q9WTW2 103 aa10.88□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Bbip1J3QMK2 67 aa10.87□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Hbb-yP02104 147 aa10.87□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 CapgP24452 352 aaKnown RBP10.87□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Rps4xP62702 263 aaKnown RBP10.87□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Rtl6Q505G4 243 aa10.87□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Foxs1Q61574 329 aa10.87□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Iqcf4Q6P8Y2 204 aa10.87□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 LgalslbQ7TPX9 165 aa10.87□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Lax1Q8BHB3 407 aa10.87□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Vmn1r26Q8R2D7 339 aa10.87□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Olfr195Q8VGQ6 308 aa10.87□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Pnpla3Q91WW7 413 aa10.87□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Gar1Q9CY66 231 aaKnown RBP10.87□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Rtl8bQ9D1F0 113 aa10.87□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Abhd5Q9DBL9 351 aa10.87□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Tmem183Q9JJB9 375 aa10.87□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Gm21103E9Q2Q1 267 aa10.87□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 AponG3X9D6 251 aa10.87□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Ccl4P14097 92 aa10.87□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Rps15aP62245 130 aaKnown RBP10.87□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Znf250Q7TNU6 535 aa10.87□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Cadm4Q8R464 388 aa10.87□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Hnf4gQ9WUU6 408 aa10.87□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Cfap54Q8C6S9 3106 aa10.87□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 FancmQ8BGE5 2021 aa10.87□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Trbv5A0A0B4J1G9 113 aa10.87□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Vmn1r232A2RTT5 351 aa10.87□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Srsf5O35326 269 aaKnown RBP10.87□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Hbb-bh0P04443 147 aa10.87□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 P06321 130 aa10.87□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Fcgr3P08508 261 aa10.87□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Hmgn2P09602 90 aa10.87□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 H2-DMaP28078 261 aa10.87□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Q0VG62 139 aa10.87□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Olfr125Q14AJ9 320 aa10.87□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 CtrcQ3SYP2 268 aa10.87□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Wfdc9Q3UW41 83 aa10.87□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Wfdc5Q4KXB6 126 aa10.87□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Msl2Q69ZF8 577 aa10.87□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Zfp748Q7TPL6 888 aa10.87□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Prss27Q8BJR6 328 aa10.87□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Phospho1Q8R2H9 267 aa10.87□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 FuomQ8R2K1 153 aa10.87□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Cd177Q8R2S8 817 aa10.87□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Prss42Q8VIF2 335 aa10.87□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 FcrlaQ920A9 352 aa10.87□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 PecrQ99MZ7 303 aa10.87□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Rab32Q9CZE3 223 aa10.87□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Kcnmb2Q9CZM9 235 aa10.87□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Arrdc2Q9D668 407 aa10.87□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Q9DAA3 117 aa10.87□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 DptQ9QZZ6 201 aa10.87□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Adamts5Q9R001 930 aa10.87□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 NgfrQ9Z0W1 417 aa10.87□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Tnrc6aQ3UHK8 1896 aaKnown RBP10.86□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Olfr1118A0A0J9YUE7 307 aa10.86□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Olfr1245A0A1L1SQJ6 307 aa10.86□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 H2al1jA2BFR3 109 aa10.86□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 CckarO08786 436 aa10.86□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 P2rx6O54803 389 aa10.86□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 MidnQ3TPJ7 465 aa10.86□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 BC061237Q6P8I2 184 aa10.86□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 ShbQ6PD21 503 aa10.86□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Olfr524Q7TRU0 318 aa10.86□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Zfp459Q8BZ17 267 aa10.86□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Shisa7Q8C3Q5 558 aa10.86□□□□□ -0.67
Pcdh1-202ENSMUST00000159405 Serinc1Q9QZI8 453 aa10.86□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 35.2 ms