RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 Tceal8Q9CZY2 117 aa11.23□□□□□ -0.61
Nup88-203ENSMUST00000108531 Armc10Q9D0L7 306 aa11.23□□□□□ -0.61
Nup88-203ENSMUST00000108531 Slc25a22Q9D6M3 323 aa11.23□□□□□ -0.61
Nup88-203ENSMUST00000108531 Wdfy3Q6VNB8 3508 aa11.23□□□□□ -0.61
Nup88-203ENSMUST00000108531 Gm45692D3Z0A0 150 aa11.23□□□□□ -0.61
Nup88-203ENSMUST00000108531 Gm2075J3QMW5 144 aa11.23□□□□□ -0.61
Nup88-203ENSMUST00000108531 Vmn1r80L7N1Z3 308 aa11.23□□□□□ -0.61
Nup88-203ENSMUST00000108531 Hbb-bh0P04443 147 aa11.23□□□□□ -0.61
Nup88-203ENSMUST00000108531 FasP25446 327 aa11.23□□□□□ -0.61
Nup88-203ENSMUST00000108531 Nanos2P60322 136 aa11.23□□□□□ -0.61
Nup88-203ENSMUST00000108531 CluQ06890 448 aa11.23□□□□□ -0.61
Nup88-203ENSMUST00000108531 Jsrp1Q3MI48 332 aa11.23□□□□□ -0.61
Nup88-203ENSMUST00000108531 Vmn1r223Q5SSA0 361 aa11.23□□□□□ -0.61
Nup88-203ENSMUST00000108531 GcdhQ60759 438 aa11.23□□□□□ -0.61
Nup88-203ENSMUST00000108531 Opn5Q6VZZ7 377 aa11.23□□□□□ -0.61
Nup88-203ENSMUST00000108531 Q80W69 301 aa11.23□□□□□ -0.61
Nup88-203ENSMUST00000108531 Fbll1Q80WS3 314 aaKnown RBP11.23□□□□□ -0.61
Nup88-203ENSMUST00000108531 Vmn1r8Q8R2C2 303 aa11.23□□□□□ -0.61
Nup88-203ENSMUST00000108531 Olfr1459Q8VFV9 307 aa11.23□□□□□ -0.61
Nup88-203ENSMUST00000108531 Olfr1377Q8VGH1 307 aa11.23□□□□□ -0.61
Nup88-203ENSMUST00000108531 Wdr77Q99J09 342 aa11.23□□□□□ -0.61
Nup88-203ENSMUST00000108531 Q9CRC3 126 aa11.23□□□□□ -0.61
Nup88-203ENSMUST00000108531 Fbp1Q9QXD6 338 aa11.23□□□□□ -0.61
Nup88-203ENSMUST00000108531 TinagQ9WUR0 475 aa11.23□□□□□ -0.61
Nup88-203ENSMUST00000108531 Fbln5Q9WVH9 448 aa11.23□□□□□ -0.61
Nup88-203ENSMUST00000108531 Igkv12-89A0A0G2JGW8 112 aa11.22□□□□□ -0.61
Nup88-203ENSMUST00000108531 Zfp982A2A8Q4 368 aa11.22□□□□□ -0.61
Nup88-203ENSMUST00000108531 4930435E12RikA6X8Z9 381 aa11.22□□□□□ -0.61
Nup88-203ENSMUST00000108531 Cd8bP10300 213 aa11.22□□□□□ -0.61
Nup88-203ENSMUST00000108531 SgcaP82350 387 aa11.22□□□□□ -0.61
Nup88-203ENSMUST00000108531 CtrcQ3SYP2 268 aa11.22□□□□□ -0.61
Nup88-203ENSMUST00000108531 Cd300lbQ3U497 209 aa11.22□□□□□ -0.61
Nup88-203ENSMUST00000108531 Calm5Q6W3E0 140 aa11.22□□□□□ -0.61
Nup88-203ENSMUST00000108531 Pramel5Q7TPY4 500 aa11.22□□□□□ -0.61
Nup88-203ENSMUST00000108531 Krt33aQ8K0Y2 404 aa11.22□□□□□ -0.61
Nup88-203ENSMUST00000108531 Olfr974Q8VH09 310 aa11.22□□□□□ -0.61
Nup88-203ENSMUST00000108531 Glo1Q9CPU0 184 aa11.22□□□□□ -0.61
Nup88-203ENSMUST00000108531 Ndufa6Q9CQZ5 131 aaKnown RBP11.22□□□□□ -0.61
Nup88-203ENSMUST00000108531 Chd7A2AJK6 2986 aaKnown RBP11.22□□□□□ -0.61
Nup88-203ENSMUST00000108531 Gm45783A0A1B0GT48 74 aa11.21□□□□□ -0.61
Nup88-203ENSMUST00000108531 Aadacl4B1AVU5 407 aa11.21□□□□□ -0.61
Nup88-203ENSMUST00000108531 NppaP05125 152 aa11.21□□□□□ -0.61
Nup88-203ENSMUST00000108531 SnrpeP62305 92 aaKnown RBP11.21□□□□□ -0.61
Nup88-203ENSMUST00000108531 Ceacam12Q3UKP4 300 aa11.21□□□□□ -0.61
Nup88-203ENSMUST00000108531 Mob3aQ8BSU7 217 aa11.21□□□□□ -0.61
Nup88-203ENSMUST00000108531 Vmn1r183Q8K3N5 305 aa11.21□□□□□ -0.61
Nup88-203ENSMUST00000108531 Sco2Q8VCL2 255 aa11.21□□□□□ -0.61
Nup88-203ENSMUST00000108531 Scrt1Q99M85 348 aa11.21□□□□□ -0.61
Nup88-203ENSMUST00000108531 Sdf2l1Q9ESP1 221 aa11.21□□□□□ -0.61
Nup88-203ENSMUST00000108531 Suclg1Q9WUM5 346 aaKnown RBP11.21□□□□□ -0.61
Nup88-203ENSMUST00000108531 Col5a1O88207 1838 aa11.21□□□□□ -0.61
Nup88-203ENSMUST00000108531 Gm42543A0A0G2JET4 117 aa11.21□□□□□ -0.61
Nup88-203ENSMUST00000108531 Zfp69A2A761 587 aa11.21□□□□□ -0.61
Nup88-203ENSMUST00000108531 Olfr1564K7N6V7 318 aa11.21□□□□□ -0.61
Nup88-203ENSMUST00000108531 Epha8O09127 1004 aa11.21□□□□□ -0.61
Nup88-203ENSMUST00000108531 Glp1rO35659 463 aa11.21□□□□□ -0.61
Nup88-203ENSMUST00000108531 P01746 140 aa11.21□□□□□ -0.61
Nup88-203ENSMUST00000108531 HhexP43120 271 aa11.21□□□□□ -0.61
Nup88-203ENSMUST00000108531 Slc35e3Q6PGC7 313 aa11.21□□□□□ -0.61
Nup88-203ENSMUST00000108531 Olfr890Q7TRD9 314 aa11.21□□□□□ -0.61
Nup88-203ENSMUST00000108531 Gm9837Q8C607 126 aa11.21□□□□□ -0.61
Nup88-203ENSMUST00000108531 Slc38a2Q8CFE6 504 aa11.21□□□□□ -0.61
Nup88-203ENSMUST00000108531 Gpr153Q8K0Z9 631 aa11.21□□□□□ -0.61
Nup88-203ENSMUST00000108531 Lyrm2Q8R033 88 aa11.21□□□□□ -0.61
Nup88-203ENSMUST00000108531 Cavin3Q91VJ2 260 aa11.21□□□□□ -0.61
Nup88-203ENSMUST00000108531 GhsrQ99P50 364 aa11.21□□□□□ -0.61
Nup88-203ENSMUST00000108531 Prss1Q9Z1R9 246 aa11.21□□□□□ -0.61
Nup88-203ENSMUST00000108531 Notch4P31695 1964 aa11.21□□□□□ -0.62
Nup88-203ENSMUST00000108531 Olfr914E9PW59 316 aa11.2□□□□□ -0.62
Nup88-203ENSMUST00000108531 Gm10037E9PX85 104 aa11.2□□□□□ -0.62
Nup88-203ENSMUST00000108531 Ankrd66J3QNN4 192 aa11.2□□□□□ -0.62
Nup88-203ENSMUST00000108531 P01795 144 aa11.2□□□□□ -0.62
Nup88-203ENSMUST00000108531 Lyz2P08905 148 aa11.2□□□□□ -0.62
Nup88-203ENSMUST00000108531 Irf2P23906 349 aa11.2□□□□□ -0.62
Nup88-203ENSMUST00000108531 Rhox4fQ2MDF8 205 aa11.2□□□□□ -0.62
Nup88-203ENSMUST00000108531 Rhox4cQ2MDG1 205 aa11.2□□□□□ -0.62
Nup88-203ENSMUST00000108531 St8sia3Q64689 380 aa11.2□□□□□ -0.62
Nup88-203ENSMUST00000108531 Ell3Q80VR2 395 aa11.2□□□□□ -0.62
Nup88-203ENSMUST00000108531 Stk17bQ8BG48 372 aa11.2□□□□□ -0.62
Nup88-203ENSMUST00000108531 Eif5a2Q8BGY2 153 aaKnown RBP11.2□□□□□ -0.62
Nup88-203ENSMUST00000108531 Gm5662Q8BX20 144 aa11.2□□□□□ -0.62
Nup88-203ENSMUST00000108531 Nhlrc3Q8CCH2 347 aa11.2□□□□□ -0.62
Nup88-203ENSMUST00000108531 Q8CDS7 251 aa11.2□□□□□ -0.62
Nup88-203ENSMUST00000108531 Mef2cQ8CFN5 474 aa11.2□□□□□ -0.62
Nup88-203ENSMUST00000108531 B3gnt8Q8R3I9 389 aa11.2□□□□□ -0.62
Nup88-203ENSMUST00000108531 Mrpl18Q9CQL5 180 aa11.2□□□□□ -0.62
Nup88-203ENSMUST00000108531 Rhox4aQ9D3I8 205 aa11.2□□□□□ -0.62
Nup88-203ENSMUST00000108531 Tas2r4Q9JKT3 297 aa11.2□□□□□ -0.62
Nup88-203ENSMUST00000108531 Gng13Q9JMF3 67 aa11.2□□□□□ -0.62
Nup88-203ENSMUST00000108531 Olfr157Q9QZ20 318 aa11.2□□□□□ -0.62
Nup88-203ENSMUST00000108531 Adam11Q9R1V4 773 aa11.2□□□□□ -0.62
Nup88-203ENSMUST00000108531 Igkv14-126A0A075B5K0 117 aa11.2□□□□□ -0.62
Nup88-203ENSMUST00000108531 Igkv6-14A0A140T8P1 115 aa11.2□□□□□ -0.62
Nup88-203ENSMUST00000108531 Ube2dnl1A2AFH1 155 aa11.2□□□□□ -0.62
Nup88-203ENSMUST00000108531 Olfr231E9Q0M4 307 aa11.2□□□□□ -0.62
Nup88-203ENSMUST00000108531 Rnase2bO35292 155 aa11.2□□□□□ -0.62
Nup88-203ENSMUST00000108531 Grk6O70293 576 aa11.2□□□□□ -0.62
Nup88-203ENSMUST00000108531 P01881 257 aa11.2□□□□□ -0.62
Nup88-203ENSMUST00000108531 CebpbP28033 296 aa11.2□□□□□ -0.62
Nup88-203ENSMUST00000108531 Rab5cP35278 216 aa11.2□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 40 ms