RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Ifi203O35368 408 aa19.34■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Wnt5aP22725 380 aa19.34■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Rap2bP61226 183 aa19.34■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Gng3P63216 75 aa19.34■□□□□ 0.69
Scn1b-201ENSMUST00000098548 LipnQ3U4B4 400 aa19.34■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Cln5Q3UMW8 341 aa19.34■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Fam57aQ5ND56 257 aa19.34■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Olfr1111Q7TR55 312 aa19.34■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Map6Q7TSJ2 906 aa19.34■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Commd7Q8BG94 200 aa19.34■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Klk14Q8CGR5 250 aa19.34■□□□□ 0.69
Scn1b-201ENSMUST00000098548 CrhQ8CIT0 187 aa19.34■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Q8VE95 218 aa19.34■□□□□ 0.69
Scn1b-201ENSMUST00000098548 DapQ91XC8 102 aa19.34■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Atg5Q99J83 275 aa19.34■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Vgll1Q99NC0 307 aa19.34■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Mpped2Q9CZJ0 294 aa19.34■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Stpg1Q9D2F5 341 aa19.34■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Wbp2nlQ9D529 359 aa19.34■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Gal3st1Q9JHE4 423 aa19.34■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Myo9aQ8C170 2542 aa19.33■□□□□ 0.69
Scn1b-201ENSMUST00000098548 SonQ9QX47 2444 aaKnown RBP19.33■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Sult2a3D3Z1W5 285 aa19.33■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Gm3676D3Z236 184 aa19.33■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Olfr914E9PW59 316 aa19.33■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Gm8220F6YKI2 213 aa19.33■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Gm3573L7N292 184 aa19.33■□□□□ 0.69
Scn1b-201ENSMUST00000098548 DhfrP00375 187 aa19.33■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Tspan5P62080 268 aa19.33■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Ppp1cbP62141 327 aa19.33■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Rac2Q05144 192 aa19.33■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Gm5127Q3UQH6 212 aa19.33■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Dtx1Q61010 627 aa19.33■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Clns1aQ61189 236 aa19.33■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Upk3bQ80YF6 275 aa19.33■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Olfr1301Q8VGE7 312 aa19.33■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Olfr559Q8VH14 318 aa19.33■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Olfr73Q920P2 313 aa19.33■□□□□ 0.69
Scn1b-201ENSMUST00000098548 SncgQ9Z0F7 123 aaKnown RBP19.33■□□□□ 0.69
Scn1b-201ENSMUST00000098548 Mast4Q811L6 2618 aa19.33■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Olfr1112A2ATA0 318 aa19.32■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Olfr1055A2AVX9 346 aa19.32■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Wdr86D3Z757 380 aa19.32■□□□□ 0.68
Scn1b-201ENSMUST00000098548 C2cd6E9Q152 557 aa19.32■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Olfr417F8VQB1 309 aa19.32■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Vmn1r14H3BJ46 303 aa19.32■□□□□ 0.68
Scn1b-201ENSMUST00000098548 DhodhO35435 395 aa19.32■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Bcl2P10417 236 aa19.32■□□□□ 0.68
Scn1b-201ENSMUST00000098548 LplP11152 474 aa19.32■□□□□ 0.68
Scn1b-201ENSMUST00000098548 H2-DMaP28078 261 aa19.32■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Rab3cP62823 227 aa19.32■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Zfp874bQ7M6X2 447 aa19.32■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Lsm11Q8BUV6 361 aa19.32■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Olfr52Q8VFL0 319 aa19.32■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Snu13Q9D0T1 128 aaKnown RBP19.32■□□□□ 0.68
Scn1b-201ENSMUST00000098548 TsnaxQ9QZE7 290 aaKnown RBP19.32■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Olfr1264Q9R0K2 308 aa19.32■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Prr23a1G3UW32 258 aa19.32■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Olfr194L7N1Y8 306 aa19.32■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Olfr203L7N205 307 aa19.32■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Gm8857L7N291 182 aa19.32■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Pdcd6P12815 191 aaKnown RBP19.32■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Ufd1P70362 307 aa19.32■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Anxa7Q07076 463 aaKnown RBP19.32■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Vmn1r181Q0P547 304 aa19.32■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Map6d1Q14BB9 191 aa19.32■□□□□ 0.68
Scn1b-201ENSMUST00000098548 RhofQ8BYP3 211 aa19.32■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Vwc2Q8C8N3 324 aa19.32■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Cuedc1Q8R3V6 388 aa19.32■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Gtf3aQ8VHT7 364 aa19.32■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Ssmem1Q9D9Y8 244 aa19.32■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Igkv4-80A0A075B5L7 116 aa19.31■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Glp1rO35659 463 aa19.31■□□□□ 0.68
Scn1b-201ENSMUST00000098548 DffbO54788 344 aaKnown RBP19.31■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Gabra6P16305 453 aa19.31■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Rce1P57791 329 aa19.31■□□□□ 0.68
Scn1b-201ENSMUST00000098548 BidP70444 195 aa19.31■□□□□ 0.68
Scn1b-201ENSMUST00000098548 McptlQ00356 246 aa19.31■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Rasl12Q08AT1 266 aa19.31■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Spock1Q62288 442 aa19.31■□□□□ 0.68
Scn1b-201ENSMUST00000098548 P4ha3Q6W3F0 542 aa19.31■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Gtdc1Q8BW56 445 aa19.31■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Lgi3Q8K406 548 aa19.31■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Tmed4Q8R1V4 227 aa19.31■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Mib2Q8R516 973 aa19.31■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Olfr1342Q8VFY3 315 aa19.31■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Taf9Q8VI33 264 aa19.31■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Bbc3Q99ML1 193 aa19.31■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Pfdn1Q9CWM4 122 aa19.31■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Pard6gQ9JK84 382 aa19.31■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Olfr936J3KMV2 267 aa19.3■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Wt1P22561 449 aa19.3■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Htr5aP30966 357 aa19.3■□□□□ 0.68
Scn1b-201ENSMUST00000098548 InmtP40936 264 aa19.3■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Cyb5aP56395 134 aa19.3■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Arpc4P59999 168 aaKnown RBP19.3■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Fgf12P61329 243 aa19.3■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Reg2Q08731 173 aa19.3■□□□□ 0.68
Scn1b-201ENSMUST00000098548 AY761185Q5ERI8 94 aa19.3■□□□□ 0.68
Scn1b-201ENSMUST00000098548 Tas2r116Q7M713 305 aa19.3■□□□□ 0.68
Retrieved 100 of 22,080 RNA–protein pairs in 27.4 ms