RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Olfr796Q8VGJ1 310 aa14.15□□□□□ -0.14
Trim28-201ENSMUST00000005705 Abhd3Q91ZH7 411 aa14.15□□□□□ -0.14
Trim28-201ENSMUST00000005705 Siglec5Q920G3 569 aa14.15□□□□□ -0.14
Trim28-201ENSMUST00000005705 Cotl1Q9CQI6 142 aa14.15□□□□□ -0.14
Trim28-201ENSMUST00000005705 Tmem196V9GX04 182 aa14.15□□□□□ -0.14
Trim28-201ENSMUST00000005705 Olfr1089A0A1L1SRK6 311 aa14.15□□□□□ -0.14
Trim28-201ENSMUST00000005705 Cyb561d1A2AE42 229 aa14.15□□□□□ -0.14
Trim28-201ENSMUST00000005705 Gm8020F6WLE9 229 aa14.15□□□□□ -0.14
Trim28-201ENSMUST00000005705 Ifitm5O88728 134 aa14.15□□□□□ -0.14
Trim28-201ENSMUST00000005705 GbaP17439 515 aa14.15□□□□□ -0.14
Trim28-201ENSMUST00000005705 Il10P18893 178 aa14.15□□□□□ -0.14
Trim28-201ENSMUST00000005705 2810408A11RikQ6NSU2 435 aa14.15□□□□□ -0.14
Trim28-201ENSMUST00000005705 Olfr453Q7TRV7 317 aa14.15□□□□□ -0.14
Trim28-201ENSMUST00000005705 Olfr1257Q8VGP0 309 aa14.15□□□□□ -0.14
Trim28-201ENSMUST00000005705 Rab5aQ9CQD1 215 aa14.15□□□□□ -0.14
Trim28-201ENSMUST00000005705 Sft2d3Q9CSV6 209 aa14.15□□□□□ -0.14
Trim28-201ENSMUST00000005705 Csf3P09920 208 aa14.14□□□□□ -0.15
Trim28-201ENSMUST00000005705 Tcl1aP56280 116 aa14.14□□□□□ -0.15
Trim28-201ENSMUST00000005705 Olfr1131Q7TR45 309 aa14.14□□□□□ -0.15
Trim28-201ENSMUST00000005705 Csnk1a1Q8BK63 337 aaKnown RBP14.14□□□□□ -0.15
Trim28-201ENSMUST00000005705 Slc25a41Q8BVN7 312 aa14.14□□□□□ -0.15
Trim28-201ENSMUST00000005705 Fam169bQ8CHT6 337 aa14.14□□□□□ -0.15
Trim28-201ENSMUST00000005705 Olfr129Q8VEY1 330 aa14.14□□□□□ -0.15
Trim28-201ENSMUST00000005705 Olfr830Q8VFJ5 315 aa14.14□□□□□ -0.15
Trim28-201ENSMUST00000005705 Tcf23Q9JLR5 209 aa14.14□□□□□ -0.15
Trim28-201ENSMUST00000005705 A630073D07RikE9PWS6 100 aa14.14□□□□□ -0.15
Trim28-201ENSMUST00000005705 1700017D01RikG5E851 209 aa14.14□□□□□ -0.15
Trim28-201ENSMUST00000005705 Gm20939L7N243 523 aa14.14□□□□□ -0.15
Trim28-201ENSMUST00000005705 Glp1rO35659 463 aa14.14□□□□□ -0.15
Trim28-201ENSMUST00000005705 Itln1O88310 313 aa14.14□□□□□ -0.15
Trim28-201ENSMUST00000005705 Hprt1P00493 218 aa14.14□□□□□ -0.15
Trim28-201ENSMUST00000005705 Ifna9P09235 190 aa14.14□□□□□ -0.15
Trim28-201ENSMUST00000005705 Atp4bP50992 294 aa14.14□□□□□ -0.15
Trim28-201ENSMUST00000005705 Cited1P97769 203 aa14.14□□□□□ -0.15
Trim28-201ENSMUST00000005705 Cdv3Q4VAA2 281 aaKnown RBP14.14□□□□□ -0.15
Trim28-201ENSMUST00000005705 Olfr1297Q8VGE8 312 aa14.14□□□□□ -0.15
Trim28-201ENSMUST00000005705 Rbm7Q9CQT2 265 aaKnown RBP14.14□□□□□ -0.15
Trim28-201ENSMUST00000005705 Gins3Q9CY94 216 aa14.14□□□□□ -0.15
Trim28-201ENSMUST00000005705 Lysmd1Q9D0E3 226 aa14.14□□□□□ -0.15
Trim28-201ENSMUST00000005705 Dnajc4Q9D844 244 aa14.14□□□□□ -0.15
Trim28-201ENSMUST00000005705 Q9D9C7 252 aa14.14□□□□□ -0.15
Trim28-201ENSMUST00000005705 Npas3Q9QZQ0 925 aa14.14□□□□□ -0.15
Trim28-201ENSMUST00000005705 Olfr1438-ps1A0A140LHS9 319 aa14.13□□□□□ -0.15
Trim28-201ENSMUST00000005705 Igkv6-25A0A140T8N7 115 aa14.13□□□□□ -0.15
Trim28-201ENSMUST00000005705 Gm6880A3KG45 208 aa14.13□□□□□ -0.15
Trim28-201ENSMUST00000005705 Ccdc188F6WEU2 249 aa14.13□□□□□ -0.15
Trim28-201ENSMUST00000005705 Rnf148G3X9R7 316 aa14.13□□□□□ -0.15
Trim28-201ENSMUST00000005705 Gm21783J3QM57 227 aa14.13□□□□□ -0.15
Trim28-201ENSMUST00000005705 Rsu1Q01730 277 aa14.13□□□□□ -0.15
Trim28-201ENSMUST00000005705 Olfr125Q14AJ9 320 aa14.13□□□□□ -0.15
Trim28-201ENSMUST00000005705 A3galt2Q3V1N9 370 aa14.13□□□□□ -0.15
Trim28-201ENSMUST00000005705 Ca15Q99N23 324 aa14.13□□□□□ -0.15
Trim28-201ENSMUST00000005705 Asb5Q9D1A4 329 aa14.13□□□□□ -0.15
Trim28-201ENSMUST00000005705 CadB2RQC6 2225 aa14.13□□□□□ -0.15
Trim28-201ENSMUST00000005705 Zfp456B2RUK9 458 aa14.13□□□□□ -0.15
Trim28-201ENSMUST00000005705 SiglechB7ZMQ6 332 aa14.13□□□□□ -0.15
Trim28-201ENSMUST00000005705 Vmn1r173E9Q8V7 313 aa14.13□□□□□ -0.15
Trim28-201ENSMUST00000005705 MscO88940 201 aa14.13□□□□□ -0.15
Trim28-201ENSMUST00000005705 Bmi1P25916 324 aa14.13□□□□□ -0.15
Trim28-201ENSMUST00000005705 Rhox4gQ2MDF7 205 aa14.13□□□□□ -0.15
Trim28-201ENSMUST00000005705 Rhox4dQ2MDG0 205 aa14.13□□□□□ -0.15
Trim28-201ENSMUST00000005705 Rhox4eQ504P9 205 aa14.13□□□□□ -0.15
Trim28-201ENSMUST00000005705 Olfr1042Q7TR81 313 aa14.13□□□□□ -0.15
Trim28-201ENSMUST00000005705 Olfr156Q8VGA9 318 aa14.13□□□□□ -0.15
Trim28-201ENSMUST00000005705 Rhox4bQ9JI43 205 aa14.13□□□□□ -0.15
Trim28-201ENSMUST00000005705 Fbxw4Q9JMJ2 410 aa14.13□□□□□ -0.15
Trim28-201ENSMUST00000005705 Wif1Q9WUA1 379 aa14.13□□□□□ -0.15
Trim28-201ENSMUST00000005705 Notch4P31695 1964 aa14.13□□□□□ -0.15
Trim28-201ENSMUST00000005705 Hsbp1l1B2RXB2 72 aa14.13□□□□□ -0.15
Trim28-201ENSMUST00000005705 Gm20878L7N244 103 aa14.13□□□□□ -0.15
Trim28-201ENSMUST00000005705 Siva1O54926 175 aa14.13□□□□□ -0.15
Trim28-201ENSMUST00000005705 Vax1Q2NKI2 338 aa14.13□□□□□ -0.15
Trim28-201ENSMUST00000005705 Lrrc10Q8K3W2 274 aa14.13□□□□□ -0.15
Trim28-201ENSMUST00000005705 Pomt1Q8R2R1 746 aa14.13□□□□□ -0.15
Trim28-201ENSMUST00000005705 Cadm4Q8R464 388 aa14.13□□□□□ -0.15
Trim28-201ENSMUST00000005705 NagkQ9QZ08 343 aa14.13□□□□□ -0.15
Trim28-201ENSMUST00000005705 Scgb1b29D2XZ31 93 aa14.12□□□□□ -0.15
Trim28-201ENSMUST00000005705 Scgb1b20E9PWZ2 93 aa14.12□□□□□ -0.15
Trim28-201ENSMUST00000005705 Vmn2r83E9Q0G7 864 aa14.12□□□□□ -0.15
Trim28-201ENSMUST00000005705 G430095P16RikE9Q913 147 aa14.12□□□□□ -0.15
Trim28-201ENSMUST00000005705 Gm20403G3UYB0 123 aa14.12□□□□□ -0.15
Trim28-201ENSMUST00000005705 Gm21863J3KMP8 111 aa14.12□□□□□ -0.15
Trim28-201ENSMUST00000005705 Klk1b1P00755 261 aa14.12□□□□□ -0.15
Trim28-201ENSMUST00000005705 GzmbP04187 247 aa14.12□□□□□ -0.15
Trim28-201ENSMUST00000005705 PlatP11214 559 aa14.12□□□□□ -0.15
Trim28-201ENSMUST00000005705 CtsaP16675 474 aa14.12□□□□□ -0.15
Trim28-201ENSMUST00000005705 Rps2P25444 293 aaKnown RBP14.12□□□□□ -0.15
Trim28-201ENSMUST00000005705 Cdx2P43241 311 aa14.12□□□□□ -0.15
Trim28-201ENSMUST00000005705 Gls2Q571F8 602 aa14.12□□□□□ -0.15
Trim28-201ENSMUST00000005705 AtcayQ8BHE3 372 aa14.12□□□□□ -0.15
Trim28-201ENSMUST00000005705 Gm5111Q8C9M4 190 aa14.12□□□□□ -0.15
Trim28-201ENSMUST00000005705 Adhfe1Q8R0N6 465 aa14.12□□□□□ -0.15
Trim28-201ENSMUST00000005705 Olfr654Q8VF27 341 aa14.12□□□□□ -0.15
Trim28-201ENSMUST00000005705 Rpusd4Q9CWX4 377 aaKnown RBP14.12□□□□□ -0.15
Trim28-201ENSMUST00000005705 Mrps28Q9CY16 186 aa14.12□□□□□ -0.15
Trim28-201ENSMUST00000005705 Tmem128Q9CZB9 163 aa14.12□□□□□ -0.15
Trim28-201ENSMUST00000005705 Wwtr1Q9EPK5 395 aa14.12□□□□□ -0.15
Trim28-201ENSMUST00000005705 Eif2s3xQ9Z0N1 472 aaKnown RBP14.12□□□□□ -0.15
Trim28-201ENSMUST00000005705 Eif2s3yQ9Z0N2 472 aa14.12□□□□□ -0.15
Trim28-201ENSMUST00000005705 Olfr122W4VSP0 330 aa14.12□□□□□ -0.15
Retrieved 100 of 22,080 RNA–protein pairs in 65.1 ms