RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 HAVCR2Q8TDQ0 301 aa2.42□□□□□ -2.02
CCDC7-213ENST00000639290 NUDCD2Q8WVJ2 157 aa2.42□□□□□ -2.02
CCDC7-213ENST00000639290 GAFA1Q96PS6 74 aa2.42□□□□□ -2.02
CCDC7-213ENST00000639290 KRCC1Q9NPI7 259 aaPredicted RBP2.42□□□□□ -2.02
CCDC7-213ENST00000639290 FBXO6Q9NRD1 293 aaPredicted RBP2.42□□□□□ -2.02
CCDC7-213ENST00000639290 OR2W1Q9Y3N9 320 aa2.42□□□□□ -2.02
CCDC7-213ENST00000639290 TNFRSF18Q9Y5U5 241 aa2.42□□□□□ -2.02
CCDC7-213ENST00000639290 A0A1W2PPI3 338 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 TOR1AO14656 332 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 EI24O14681 340 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 CST4P01036 141 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 CST2P09228 141 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 CA6P23280 308 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 CXCR1P25024 350 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 PAX6P26367 422 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 CMC4P56277 68 aaPredicted RBP2.41□□□□□ -2.02
CCDC7-213ENST00000639290 PRB3Q04118 309 aaPredicted RBP2.41□□□□□ -2.02
CCDC7-213ENST00000639290 FADDQ13158 208 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 RGS21Q2M5E4 152 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 CYBRD1Q53TN4 286 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 DCST2Q5T1A1 773 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 ZNF660Q6AZW8 331 aaPredicted RBP2.41□□□□□ -2.02
CCDC7-213ENST00000639290 ZNF773Q6PK81 442 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 LRRC75AQ8NAA5 344 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 Q8NAQ8 132 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 ZNF114Q8NC26 417 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 OR11H2Q8NH07 326 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 GTF2H4Q92759 462 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 SDSLQ96GA7 329 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 CNN2Q99439 309 aaKnown RBP2.41□□□□□ -2.02
CCDC7-213ENST00000639290 CLEC7AQ9BXN2 247 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 TXNIPQ9H3M7 391 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 SAV1Q9H4B6 383 aaPredicted RBP2.41□□□□□ -2.02
CCDC7-213ENST00000639290 NIPAL2Q9H841 368 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 ZNF355PQ9NSJ1 428 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 DCAF13Q9NV06 445 aaKnown RBP2.41□□□□□ -2.02
CCDC7-213ENST00000639290 CLEC5AQ9NY25 188 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 PRELID1Q9Y255 219 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 TMEM210A6NLX4 147 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 MPTX1A8MV57 137 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 SIVA1O15304 175 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 MPZL2O60487 215 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 CA1P00915 261 aaPredicted RBP2.41□□□□□ -2.02
CCDC7-213ENST00000639290 KRTAP2-3P0C7H8 128 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 EFNA1P20827 205 aaPredicted RBP2.41□□□□□ -2.02
CCDC7-213ENST00000639290 DCKP27707 260 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 GCAP28676 217 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 EPHA2P29317 976 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 C21orf33P30042 268 aaPredicted RBP2.41□□□□□ -2.02
CCDC7-213ENST00000639290 IFNA8P32881 189 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 RPL37AP61513 92 aaKnown RBP2.41□□□□□ -2.02
CCDC7-213ENST00000639290 NAB1Q13506 487 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 UBE2V2Q15819 145 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 SLC22A6Q4U2R8 563 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 SAPCD1Q5SSQ6 148 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 GPR107Q5VW38 600 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 ZNF66Q6ZN08 573 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 LRRC74BQ6ZQY2 392 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 ZNF571Q7Z3V5 609 aaPredicted RBP2.41□□□□□ -2.02
CCDC7-213ENST00000639290 DCXRQ7Z4W1 244 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 APRG1Q8IVJ8 170 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 JAGN1Q8N5M9 183 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 PRR26Q8N8Z3 221 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 OR4A5Q8NH83 315 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 CNIH3Q8TBE1 160 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 EXOSC8Q96B26 276 aaKnown RBP2.41□□□□□ -2.02
CCDC7-213ENST00000639290 NSL1Q96IY1 281 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 SH3GL3Q99963 347 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 NIPSNAP3BQ9BS92 247 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 MLST8Q9BVC4 326 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 KRTAP2-4Q9BYR9 128 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 OR2H1Q9GZK4 316 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 DERL2Q9GZP9 239 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 ADGRL4Q9HBW9 690 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 NRN1Q9NPD7 142 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 NUDT4Q9NZJ9 180 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 ZNF225Q9UK10 706 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 EXOSC1Q9Y3B2 195 aaKnown RBP2.41□□□□□ -2.02
CCDC7-213ENST00000639290 HILPDAQ9Y5L2 63 aa2.41□□□□□ -2.02
CCDC7-213ENST00000639290 A0A087WTM6 91 aa2.4□□□□□ -2.02
CCDC7-213ENST00000639290 A0A087WZ39 114 aa2.4□□□□□ -2.02
CCDC7-213ENST00000639290 A0A087X0T9 212 aa2.4□□□□□ -2.02
CCDC7-213ENST00000639290 SIRPB1O00241 398 aa2.4□□□□□ -2.02
CCDC7-213ENST00000639290 NDUFAB1O14561 156 aa2.4□□□□□ -2.02
CCDC7-213ENST00000639290 RFXANKO14593 260 aa2.4□□□□□ -2.02
CCDC7-213ENST00000639290 OR5F1O95221 314 aa2.4□□□□□ -2.02
CCDC7-213ENST00000639290 SERPINA1P01009 418 aa2.4□□□□□ -2.02
CCDC7-213ENST00000639290 PATE4P0C8F1 98 aa2.4□□□□□ -2.02
CCDC7-213ENST00000639290 OCMP0CE72 109 aaPredicted RBP2.4□□□□□ -2.02
CCDC7-213ENST00000639290 ZNF20P17024 532 aa2.4□□□□□ -2.02
CCDC7-213ENST00000639290 PMCHP20382 165 aa2.4□□□□□ -2.02
CCDC7-213ENST00000639290 CX3CR1P49238 355 aa2.4□□□□□ -2.02
CCDC7-213ENST00000639290 CDKN2DP55273 166 aa2.4□□□□□ -2.02
CCDC7-213ENST00000639290 TMEM50BP56557 158 aa2.4□□□□□ -2.02
CCDC7-213ENST00000639290 RWDD2BP57060 319 aa2.4□□□□□ -2.02
CCDC7-213ENST00000639290 RPL27P61353 136 aaKnown RBP2.4□□□□□ -2.02
CCDC7-213ENST00000639290 ATP6V0D1P61421 351 aa2.4□□□□□ -2.02
CCDC7-213ENST00000639290 HERV-K104P61576 105 aa2.4□□□□□ -2.02
CCDC7-213ENST00000639290 DR1Q01658 176 aa2.4□□□□□ -2.02
CCDC7-213ENST00000639290 SRSF9Q13242 221 aaKnown RBP eCLIP2.4□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms