RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 OR3A3P47888 321 aa13.13□□□□□ -0.31
SMN2-216ENST00000638794 WNT4P56705 351 aa13.13□□□□□ -0.31
SMN2-216ENST00000638794 HTD2P86397 168 aa13.13□□□□□ -0.31
SMN2-216ENST00000638794 KIAA0141Q14154 515 aaPredicted RBP13.13□□□□□ -0.31
SMN2-216ENST00000638794 ZNF833PQ6ZTB9 187 aa13.13□□□□□ -0.31
SMN2-216ENST00000638794 PACRGLQ8N7B6 248 aa13.13□□□□□ -0.31
SMN2-216ENST00000638794 UBE2E2Q96LR5 201 aa13.13□□□□□ -0.31
SMN2-216ENST00000638794 NABP2Q9BQ15 211 aa13.13□□□□□ -0.31
SMN2-216ENST00000638794 CHCHD6Q9BRQ6 235 aa13.13□□□□□ -0.31
SMN2-216ENST00000638794 CST11Q9H112 138 aa13.13□□□□□ -0.31
SMN2-216ENST00000638794 OR51J1Q9H342 316 aa13.13□□□□□ -0.31
SMN2-216ENST00000638794 CNOT2Q9NZN8 540 aaKnown RBP13.13□□□□□ -0.31
SMN2-216ENST00000638794 U3KQK5 164 aa13.13□□□□□ -0.31
SMN2-216ENST00000638794 SAA2-SAA4A0A096LPE2 208 aa13.12□□□□□ -0.31
SMN2-216ENST00000638794 EBAG9O00559 213 aa13.12□□□□□ -0.31
SMN2-216ENST00000638794 NBR2O15453 112 aa13.12□□□□□ -0.31
SMN2-216ENST00000638794 YPEL1O60688 119 aa13.12□□□□□ -0.31
SMN2-216ENST00000638794 SAA2P0DJI9 122 aaPredicted RBP13.12□□□□□ -0.31
SMN2-216ENST00000638794 MAPK3P27361 379 aaPredicted RBP13.12□□□□□ -0.31
SMN2-216ENST00000638794 ZNF260Q3ZCT1 412 aa13.12□□□□□ -0.31
SMN2-216ENST00000638794 ASPHD1Q5U4P2 390 aa13.12□□□□□ -0.31
SMN2-216ENST00000638794 TMEM65Q6PI78 240 aa13.12□□□□□ -0.31
SMN2-216ENST00000638794 AHSA2Q719I0 299 aa13.12□□□□□ -0.31
SMN2-216ENST00000638794 ZNF491Q8N8L2 437 aa13.12□□□□□ -0.31
SMN2-216ENST00000638794 YPEL2Q96QA6 119 aa13.12□□□□□ -0.31
SMN2-216ENST00000638794 SULT4A1Q9BR01 284 aa13.12□□□□□ -0.31
SMN2-216ENST00000638794 ZNF251Q9BRH9 671 aa13.12□□□□□ -0.31
SMN2-216ENST00000638794 ANKRD60Q9BZ19 345 aa13.12□□□□□ -0.31
SMN2-216ENST00000638794 C8orf4Q9NR00 106 aa13.12□□□□□ -0.31
SMN2-216ENST00000638794 PARP11Q9NR21 331 aa13.12□□□□□ -0.31
SMN2-216ENST00000638794 GHRLQ9UBU3 117 aa13.12□□□□□ -0.31
SMN2-216ENST00000638794 PSORS1C1Q9UIG5 152 aa13.12□□□□□ -0.31
SMN2-216ENST00000638794 SORL1Q92673 2214 aa13.12□□□□□ -0.31
SMN2-216ENST00000638794 IGHV7-81A0A0B4J1V7 117 aa13.11□□□□□ -0.31
SMN2-216ENST00000638794 I3L521 148 aa13.11□□□□□ -0.31
SMN2-216ENST00000638794 RGS11O94810 467 aa13.11□□□□□ -0.31
SMN2-216ENST00000638794 IGLV1-40P01703 118 aa13.11□□□□□ -0.31
SMN2-216ENST00000638794 OR8U8P0C7N1 319 aa13.11□□□□□ -0.31
SMN2-216ENST00000638794 CHATP28329 748 aa13.11□□□□□ -0.31
SMN2-216ENST00000638794 BLVRBP30043 206 aaPredicted RBP13.11□□□□□ -0.31
SMN2-216ENST00000638794 GNB1P62873 340 aa13.11□□□□□ -0.31
SMN2-216ENST00000638794 INSL4Q14641 139 aa13.11□□□□□ -0.31
SMN2-216ENST00000638794 HMGN3Q15651 99 aa13.11□□□□□ -0.31
SMN2-216ENST00000638794 C5orf64Q2M2E5 130 aa13.11□□□□□ -0.31
SMN2-216ENST00000638794 LY6G6FQ5SQ64 297 aa13.11□□□□□ -0.31
SMN2-216ENST00000638794 OR10K2Q6IF99 312 aa13.11□□□□□ -0.31
SMN2-216ENST00000638794 C8orf59Q8N0T1 100 aaPredicted RBP13.11□□□□□ -0.31
SMN2-216ENST00000638794 NANOGP1Q8N7R0 232 aa13.11□□□□□ -0.31
SMN2-216ENST00000638794 OR2AK2Q8NG84 335 aa13.11□□□□□ -0.31
SMN2-216ENST00000638794 OR1N2Q8NGR9 330 aa13.11□□□□□ -0.31
SMN2-216ENST00000638794 THRSPQ92748 146 aa13.11□□□□□ -0.31
SMN2-216ENST00000638794 GALMQ96C23 342 aa13.11□□□□□ -0.31
SMN2-216ENST00000638794 OR5B12Q96R08 314 aa13.11□□□□□ -0.31
SMN2-216ENST00000638794 IFI27L2Q9H2X8 130 aa13.11□□□□□ -0.31
SMN2-216ENST00000638794 VSIG4Q9Y279 399 aa13.11□□□□□ -0.31
SMN2-216ENST00000638794 ZNF256Q9Y2P7 627 aaPredicted RBP13.11□□□□□ -0.31
SMN2-216ENST00000638794 TRAV41A0A0B4J266 112 aa13.1□□□□□ -0.31
SMN2-216ENST00000638794 RUNX1Q01196 453 aa13.1□□□□□ -0.31
SMN2-216ENST00000638794 FAM27D1Q5T7N8 215 aa13.1□□□□□ -0.31
SMN2-216ENST00000638794 C6orf201Q7Z4U5 140 aa13.1□□□□□ -0.31
SMN2-216ENST00000638794 NPBQ8NG41 125 aa13.1□□□□□ -0.31
SMN2-216ENST00000638794 NEDD4LQ96PU5 975 aa13.1□□□□□ -0.31
SMN2-216ENST00000638794 FAAP24Q9BTP7 215 aa13.1□□□□□ -0.31
SMN2-216ENST00000638794 PLCXD1Q9NUJ7 323 aa13.1□□□□□ -0.31
SMN2-216ENST00000638794 NDUFA3O95167 84 aa13.09□□□□□ -0.31
SMN2-216ENST00000638794 UBBP0CG47 229 aa13.09□□□□□ -0.31
SMN2-216ENST00000638794 RAB9AP51151 201 aa13.09□□□□□ -0.31
SMN2-216ENST00000638794 RPS27AP62979 156 aaKnown RBP13.09□□□□□ -0.31
SMN2-216ENST00000638794 NDPQ00604 133 aa13.09□□□□□ -0.31
SMN2-216ENST00000638794 ZNF616Q08AN1 781 aa13.09□□□□□ -0.31
SMN2-216ENST00000638794 LIN54Q6MZP7 749 aa13.09□□□□□ -0.31
SMN2-216ENST00000638794 MINDY2Q8NBR6 621 aa13.09□□□□□ -0.31
SMN2-216ENST00000638794 BPIFB6Q8NFQ5 453 aa13.09□□□□□ -0.31
SMN2-216ENST00000638794 FBLIM1Q8WUP2 373 aa13.09□□□□□ -0.31
SMN2-216ENST00000638794 IL1F10Q8WWZ1 152 aa13.09□□□□□ -0.31
SMN2-216ENST00000638794 ASCL2Q99929 193 aa13.09□□□□□ -0.31
SMN2-216ENST00000638794 TMEM59Q9BXS4 323 aa13.09□□□□□ -0.31
SMN2-216ENST00000638794 KCNK15Q9H427 330 aa13.09□□□□□ -0.31
SMN2-216ENST00000638794 FKBP14Q9NWM8 211 aa13.09□□□□□ -0.31
SMN2-216ENST00000638794 ABRACLQ9P1F3 81 aa13.09□□□□□ -0.31
SMN2-216ENST00000638794 KIAA1456Q9P272 454 aa13.09□□□□□ -0.31
SMN2-216ENST00000638794 LRRC42Q9Y546 428 aa13.09□□□□□ -0.31
SMN2-216ENST00000638794 ST8SIA5O15466 376 aa13.08□□□□□ -0.32
SMN2-216ENST00000638794 HTR2CP28335 458 aa13.08□□□□□ -0.32
SMN2-216ENST00000638794 INSL3P51460 131 aa13.08□□□□□ -0.32
SMN2-216ENST00000638794 UNC119Q13432 240 aa13.08□□□□□ -0.32
SMN2-216ENST00000638794 RCN1Q15293 331 aa13.08□□□□□ -0.32
SMN2-216ENST00000638794 ECSCRQ19T08 205 aa13.08□□□□□ -0.32
SMN2-216ENST00000638794 ACSM3Q53FZ2 586 aa13.08□□□□□ -0.32
SMN2-216ENST00000638794 RBM48Q5RL73 367 aaKnown RBP13.08□□□□□ -0.32
SMN2-216ENST00000638794 FAM71F2Q6NXP2 309 aa13.08□□□□□ -0.32
SMN2-216ENST00000638794 FAM131AQ6UXB0 335 aa13.08□□□□□ -0.32
SMN2-216ENST00000638794 LRRTM1Q86UE6 522 aa13.08□□□□□ -0.32
SMN2-216ENST00000638794 SVOPQ8N4V2 548 aa13.08□□□□□ -0.32
SMN2-216ENST00000638794 NICN1Q9BSH3 213 aa13.08□□□□□ -0.32
SMN2-216ENST00000638794 STEAP1Q9UHE8 339 aa13.08□□□□□ -0.32
SMN2-216ENST00000638794 ERGIC3Q9Y282 383 aa13.08□□□□□ -0.32
SMN2-216ENST00000638794 FBXO7Q9Y3I1 522 aa13.08□□□□□ -0.32
SMN2-216ENST00000638794 DNAH7Q8WXX0 4024 aa13.08□□□□□ -0.32
SMN2-216ENST00000638794 SOX15O60248 233 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms