RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 SSX1Q16384 188 aa13.25□□□□□ -0.29
CACNA1A-259ENST00000638114 OXLD1Q5BKU9 147 aa13.25□□□□□ -0.29
CACNA1A-259ENST00000638114 Q8N9W7 124 aa13.25□□□□□ -0.29
CACNA1A-259ENST00000638114 OR51D1Q8NGF3 324 aa13.25□□□□□ -0.29
CACNA1A-259ENST00000638114 RBMXL1Q96E39 390 aaKnown RBP13.25□□□□□ -0.29
CACNA1A-259ENST00000638114 YPEL2Q96QA6 119 aa13.25□□□□□ -0.29
CACNA1A-259ENST00000638114 LIN7CQ9NUP9 197 aaKnown RBP13.25□□□□□ -0.29
CACNA1A-259ENST00000638114 V9GY05 133 aa13.25□□□□□ -0.29
CACNA1A-259ENST00000638114 NAPSAO96009 420 aa13.24□□□□□ -0.29
CACNA1A-259ENST00000638114 CD33P20138 364 aa13.24□□□□□ -0.29
CACNA1A-259ENST00000638114 SLC35B1P78383 322 aa13.24□□□□□ -0.29
CACNA1A-259ENST00000638114 LSAMPQ13449 338 aa13.24□□□□□ -0.29
CACNA1A-259ENST00000638114 Q6ZPA2 131 aa13.24□□□□□ -0.29
CACNA1A-259ENST00000638114 MOB1BQ7L9L4 216 aa13.24□□□□□ -0.29
CACNA1A-259ENST00000638114 OR2AK2Q8NG84 335 aa13.24□□□□□ -0.29
CACNA1A-259ENST00000638114 FAM3DQ96BQ1 224 aa13.24□□□□□ -0.29
CACNA1A-259ENST00000638114 S1PR3Q99500 378 aa13.24□□□□□ -0.29
CACNA1A-259ENST00000638114 RASL11BQ9BPW5 248 aa13.24□□□□□ -0.29
CACNA1A-259ENST00000638114 HDHD3Q9BSH5 251 aaPredicted RBP13.24□□□□□ -0.29
CACNA1A-259ENST00000638114 ABCG5Q9H222 651 aa13.24□□□□□ -0.29
CACNA1A-259ENST00000638114 STEAP1Q9UHE8 339 aa13.24□□□□□ -0.29
CACNA1A-259ENST00000638114 AK3Q9UIJ7 227 aa13.24□□□□□ -0.29
CACNA1A-259ENST00000638114 PRKDCP78527 4128 aaKnown RBP13.24□□□□□ -0.29
CACNA1A-259ENST00000638114 LINC01548A6NM66 108 aa13.23□□□□□ -0.29
CACNA1A-259ENST00000638114 RANBP1P43487 201 aa13.23□□□□□ -0.29
CACNA1A-259ENST00000638114 GPR12P47775 334 aa13.23□□□□□ -0.29
CACNA1A-259ENST00000638114 VEGFCP49767 419 aa13.23□□□□□ -0.29
CACNA1A-259ENST00000638114 PSMD7P51665 324 aa13.23□□□□□ -0.29
CACNA1A-259ENST00000638114 GABARAPL2P60520 117 aa13.23□□□□□ -0.29
CACNA1A-259ENST00000638114 KPRPQ5T749 579 aaPredicted RBP13.23□□□□□ -0.29
CACNA1A-259ENST00000638114 HES5Q5TA89 166 aa13.23□□□□□ -0.29
CACNA1A-259ENST00000638114 ZNF880Q6PDB4 577 aa13.23□□□□□ -0.29
CACNA1A-259ENST00000638114 ODF3L1Q8IXM7 274 aa13.23□□□□□ -0.29
CACNA1A-259ENST00000638114 STPG2Q8N412 459 aa13.23□□□□□ -0.29
CACNA1A-259ENST00000638114 FAM89BQ8N5H3 189 aa13.23□□□□□ -0.29
CACNA1A-259ENST00000638114 OR8H1Q8NGG4 311 aa13.23□□□□□ -0.29
CACNA1A-259ENST00000638114 MRPL20Q9BYC9 149 aaKnown RBP13.23□□□□□ -0.29
CACNA1A-259ENST00000638114 RIMS4Q9H426 269 aaPredicted RBP13.23□□□□□ -0.29
CACNA1A-259ENST00000638114 PLSCR3Q9NRY6 295 aa13.23□□□□□ -0.29
CACNA1A-259ENST00000638114 NDUFB11Q9NX14 153 aa13.23□□□□□ -0.29
CACNA1A-259ENST00000638114 FOXI3A8MTJ6 420 aaPredicted RBP13.22□□□□□ -0.29
CACNA1A-259ENST00000638114 AP4M1O00189 453 aa13.22□□□□□ -0.29
CACNA1A-259ENST00000638114 PDCD5O14737 125 aa13.22□□□□□ -0.29
CACNA1A-259ENST00000638114 PRB2P02812 416 aaPredicted RBP13.22□□□□□ -0.29
CACNA1A-259ENST00000638114 MYL9P24844 172 aa13.22□□□□□ -0.29
CACNA1A-259ENST00000638114 OR3A3P47888 321 aa13.22□□□□□ -0.29
CACNA1A-259ENST00000638114 C2orf76Q3KRA6 126 aa13.22□□□□□ -0.29
CACNA1A-259ENST00000638114 LY6G6FQ5SQ64 297 aa13.22□□□□□ -0.29
CACNA1A-259ENST00000638114 OR56B1Q8NGI3 324 aa13.22□□□□□ -0.29
CACNA1A-259ENST00000638114 ARHGAP5-AS1Q96IT6 56 aa13.22□□□□□ -0.29
CACNA1A-259ENST00000638114 Q9H521 79 aa13.22□□□□□ -0.29
CACNA1A-259ENST00000638114 C12orf4Q9NQ89 552 aa13.22□□□□□ -0.29
CACNA1A-259ENST00000638114 HSF4Q9ULV5 492 aa13.22□□□□□ -0.29
CACNA1A-259ENST00000638114 SAA2-SAA4A0A096LPE2 208 aa13.21□□□□□ -0.29
CACNA1A-259ENST00000638114 TRBV6-6A0A0A6YYG2 114 aa13.21□□□□□ -0.29
CACNA1A-259ENST00000638114 ST8SIA5O15466 376 aa13.21□□□□□ -0.29
CACNA1A-259ENST00000638114 DENRO43583 198 aaKnown RBP13.21□□□□□ -0.29
CACNA1A-259ENST00000638114 SAA2P0DJI9 122 aaPredicted RBP13.21□□□□□ -0.29
CACNA1A-259ENST00000638114 F2RL1P55085 397 aa13.21□□□□□ -0.29
CACNA1A-259ENST00000638114 TMEM50BP56557 158 aa13.21□□□□□ -0.29
CACNA1A-259ENST00000638114 OR10A3P58181 314 aa13.21□□□□□ -0.29
CACNA1A-259ENST00000638114 RPL23AP62750 156 aaKnown RBP13.21□□□□□ -0.29
CACNA1A-259ENST00000638114 HLA-DRB3P79483 266 aa13.21□□□□□ -0.29
CACNA1A-259ENST00000638114 MMDQ15546 238 aa13.21□□□□□ -0.29
CACNA1A-259ENST00000638114 ZNF833PQ6ZTB9 187 aa13.21□□□□□ -0.29
CACNA1A-259ENST00000638114 FAM71E2Q8N5Q1 922 aa13.21□□□□□ -0.29
CACNA1A-259ENST00000638114 NABP2Q9BQ15 211 aa13.21□□□□□ -0.29
CACNA1A-259ENST00000638114 PECRQ9BY49 303 aa13.21□□□□□ -0.29
CACNA1A-259ENST00000638114 IFI27L2Q9H2X8 130 aa13.21□□□□□ -0.29
CACNA1A-259ENST00000638114 SLC23A1Q9UHI7 598 aa13.21□□□□□ -0.29
CACNA1A-259ENST00000638114 TRAV1-2A0A0B4J238 106 aa13.2□□□□□ -0.3
CACNA1A-259ENST00000638114 TMEM272A0A1B0GTI8 110 aa13.2□□□□□ -0.3
CACNA1A-259ENST00000638114 TRDV1A0A1B0GX56 115 aa13.2□□□□□ -0.3
CACNA1A-259ENST00000638114 NUDT19A8MXV4 375 aa13.2□□□□□ -0.3
CACNA1A-259ENST00000638114 RRP9O43818 475 aaKnown RBP13.2□□□□□ -0.3
CACNA1A-259ENST00000638114 MRPS14O60783 128 aaKnown RBP13.2□□□□□ -0.3
CACNA1A-259ENST00000638114 SLC2A2P11168 524 aaPredicted RBP13.2□□□□□ -0.3
CACNA1A-259ENST00000638114 IGLL1P15814 213 aa13.2□□□□□ -0.3
CACNA1A-259ENST00000638114 SOX6P35712 828 aa13.2□□□□□ -0.3
CACNA1A-259ENST00000638114 PLA2G7Q13093 441 aa13.2□□□□□ -0.3
CACNA1A-259ENST00000638114 CD200R1LQ6Q8B3 271 aa13.2□□□□□ -0.3
CACNA1A-259ENST00000638114 COMMD1Q8N668 190 aa13.2□□□□□ -0.3
CACNA1A-259ENST00000638114 WFDC9Q8NEX5 89 aa13.2□□□□□ -0.3
CACNA1A-259ENST00000638114 PHF21AQ96BD5 680 aa13.2□□□□□ -0.3
CACNA1A-259ENST00000638114 CMSS1Q9BQ75 279 aaKnown RBP13.2□□□□□ -0.3
CACNA1A-259ENST00000638114 HSPB9Q9BQS6 159 aa13.2□□□□□ -0.3
CACNA1A-259ENST00000638114 PIPOXQ9P0Z9 390 aa13.2□□□□□ -0.3
CACNA1A-259ENST00000638114 OR1A1Q9P1Q5 309 aa13.2□□□□□ -0.3
CACNA1A-259ENST00000638114 RAB22AQ9UL26 194 aa13.2□□□□□ -0.3
CACNA1A-259ENST00000638114 MGAT4AQ9UM21 535 aa13.2□□□□□ -0.3
CACNA1A-259ENST00000638114 SHISA3A0PJX4 238 aa13.19□□□□□ -0.3
CACNA1A-259ENST00000638114 RAB29O14966 203 aa13.19□□□□□ -0.3
CACNA1A-259ENST00000638114 LDLRAD4O15165 306 aa13.19□□□□□ -0.3
CACNA1A-259ENST00000638114 HSPA12AO43301 675 aa13.19□□□□□ -0.3
CACNA1A-259ENST00000638114 RAB3BP20337 219 aa13.19□□□□□ -0.3
CACNA1A-259ENST00000638114 PSMB9P28065 219 aa13.19□□□□□ -0.3
CACNA1A-259ENST00000638114 ACTBP60709 375 aa13.19□□□□□ -0.3
CACNA1A-259ENST00000638114 PLAC9Q5JTB6 97 aa13.19□□□□□ -0.3
CACNA1A-259ENST00000638114 C22orf42Q6IC83 251 aa13.19□□□□□ -0.3
CACNA1A-259ENST00000638114 TEX38Q6PEX7 206 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms