RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 HOXA5P20719 270 aa5.49□□□□□ -1.53
UPF3B-205ENST00000636792 GDNFP39905 211 aa5.49□□□□□ -1.53
UPF3B-205ENST00000636792 OR3A3P47888 321 aa5.49□□□□□ -1.53
UPF3B-205ENST00000636792 PPP5CP53041 499 aa5.49□□□□□ -1.53
UPF3B-205ENST00000636792 PRRX1P54821 245 aa5.49□□□□□ -1.53
UPF3B-205ENST00000636792 LOXL3P58215 753 aa5.49□□□□□ -1.53
UPF3B-205ENST00000636792 LSAMPQ13449 338 aa5.49□□□□□ -1.53
UPF3B-205ENST00000636792 DYRK1AQ13627 763 aa5.49□□□□□ -1.53
UPF3B-205ENST00000636792 AANATQ16613 207 aa5.49□□□□□ -1.53
UPF3B-205ENST00000636792 HLA-DRB5Q30154 266 aa5.49□□□□□ -1.53
UPF3B-205ENST00000636792 CHRFAM7AQ494W8 412 aa5.49□□□□□ -1.53
UPF3B-205ENST00000636792 PYDC2Q56P42 97 aa5.49□□□□□ -1.53
UPF3B-205ENST00000636792 RNASE10Q5GAN6 216 aaKnown RBP5.49□□□□□ -1.53
UPF3B-205ENST00000636792 TRIQKQ629K1 86 aa5.49□□□□□ -1.53
UPF3B-205ENST00000636792 CCDC144NLQ6NUI1 221 aa5.49□□□□□ -1.53
UPF3B-205ENST00000636792 SLC25A48Q6ZT89 311 aaKnown RBP5.49□□□□□ -1.53
UPF3B-205ENST00000636792 OVCH2Q7RTZ1 564 aa5.49□□□□□ -1.53
UPF3B-205ENST00000636792 VMO1Q7Z5L0 202 aa5.49□□□□□ -1.53
UPF3B-205ENST00000636792 CIARTQ8N365 385 aaPredicted RBP5.49□□□□□ -1.53
UPF3B-205ENST00000636792 MFSD4AQ8N468 514 aa5.49□□□□□ -1.53
UPF3B-205ENST00000636792 Q8N7P7 452 aa5.49□□□□□ -1.53
UPF3B-205ENST00000636792 TPRX1Q8N7U7 411 aa5.49□□□□□ -1.53
UPF3B-205ENST00000636792 OR5H2Q8NGV7 314 aa5.49□□□□□ -1.53
UPF3B-205ENST00000636792 OR52I2Q8NH67 350 aa5.49□□□□□ -1.53
UPF3B-205ENST00000636792 OR10J5Q8NHC4 309 aa5.49□□□□□ -1.53
UPF3B-205ENST00000636792 TRIM63Q969Q1 353 aa5.49□□□□□ -1.53
UPF3B-205ENST00000636792 GINS4Q9BRT9 223 aa5.49□□□□□ -1.53
UPF3B-205ENST00000636792 HDHD3Q9BSH5 251 aaPredicted RBP5.49□□□□□ -1.53
UPF3B-205ENST00000636792 PALMDQ9NP74 551 aa5.49□□□□□ -1.53
UPF3B-205ENST00000636792 MMP26Q9NRE1 261 aa5.49□□□□□ -1.53
UPF3B-205ENST00000636792 GNG12Q9UBI6 72 aa5.49□□□□□ -1.53
UPF3B-205ENST00000636792 MED13LQ71F56 2210 aa5.49□□□□□ -1.53
UPF3B-205ENST00000636792 ARHGAP32A7KAX9 2087 aa5.49□□□□□ -1.53
UPF3B-205ENST00000636792 IGHV2-26A0A0B4J1V2 119 aa5.48□□□□□ -1.53
UPF3B-205ENST00000636792 PIGBOS1A0A0B4J2F0 54 aa5.48□□□□□ -1.53
UPF3B-205ENST00000636792 CENPXA8MT69 81 aa5.48□□□□□ -1.53
UPF3B-205ENST00000636792 SMAD7O15105 426 aaKnown RBP5.48□□□□□ -1.53
UPF3B-205ENST00000636792 HSPA12AO43301 675 aa5.48□□□□□ -1.53
UPF3B-205ENST00000636792 TUSC2O75896 110 aa5.48□□□□□ -1.53
UPF3B-205ENST00000636792 IGLV1-47P01700 117 aa5.48□□□□□ -1.53
UPF3B-205ENST00000636792 MED14OSP0DP75 135 aa5.48□□□□□ -1.53
UPF3B-205ENST00000636792 RBMXP38159 391 aaKnown RBP5.48□□□□□ -1.53
UPF3B-205ENST00000636792 INPP1P49441 399 aa5.48□□□□□ -1.53
UPF3B-205ENST00000636792 UCP3P55916 312 aa5.48□□□□□ -1.53
UPF3B-205ENST00000636792 ARF6P62330 175 aa5.48□□□□□ -1.53
UPF3B-205ENST00000636792 TAGLNQ01995 201 aaKnown RBP5.48□□□□□ -1.53
UPF3B-205ENST00000636792 SURF2Q15527 256 aaPredicted RBP5.48□□□□□ -1.53
UPF3B-205ENST00000636792 MORN2Q502X0 79 aa5.48□□□□□ -1.53
UPF3B-205ENST00000636792 KRTAP5-3Q6L8H2 238 aa5.48□□□□□ -1.53
UPF3B-205ENST00000636792 LPCAT3Q6P1A2 487 aa5.48□□□□□ -1.53
UPF3B-205ENST00000636792 Q6ZPA2 131 aa5.48□□□□□ -1.53
UPF3B-205ENST00000636792 IZUMO1Q8IYV9 350 aa5.48□□□□□ -1.53
UPF3B-205ENST00000636792 H1FOOQ8IZA3 346 aaPredicted RBP5.48□□□□□ -1.53
UPF3B-205ENST00000636792 FGFRL1Q8N441 504 aa5.48□□□□□ -1.53
UPF3B-205ENST00000636792 TOMM5Q8N4H5 51 aa5.48□□□□□ -1.53
UPF3B-205ENST00000636792 ZBTB34Q8NCN2 500 aa5.48□□□□□ -1.53
UPF3B-205ENST00000636792 OR2AK2Q8NG84 335 aa5.48□□□□□ -1.53
UPF3B-205ENST00000636792 SETD6Q8TBK2 473 aa5.48□□□□□ -1.53
UPF3B-205ENST00000636792 GIMAP1Q8WWP7 306 aa5.48□□□□□ -1.53
UPF3B-205ENST00000636792 SNAPC3Q92966 411 aa5.48□□□□□ -1.53
UPF3B-205ENST00000636792 ZNF486Q96H40 463 aaPredicted RBP5.48□□□□□ -1.53
UPF3B-205ENST00000636792 TBX15Q96SF7 602 aa5.48□□□□□ -1.53
UPF3B-205ENST00000636792 PRRT1Q99946 306 aa5.48□□□□□ -1.53
UPF3B-205ENST00000636792 PCGF1Q9BSM1 259 aa5.48□□□□□ -1.53
UPF3B-205ENST00000636792 THAP7Q9BT49 309 aaPredicted RBP5.48□□□□□ -1.53
UPF3B-205ENST00000636792 ABHD14AQ9BUJ0 271 aa5.48□□□□□ -1.53
UPF3B-205ENST00000636792 ST6GALNAC5Q9BVH7 336 aa5.48□□□□□ -1.53
UPF3B-205ENST00000636792 MMP28Q9H239 520 aa5.48□□□□□ -1.53
UPF3B-205ENST00000636792 OR2S2Q9NQN1 319 aa5.48□□□□□ -1.53
UPF3B-205ENST00000636792 PIPOXQ9P0Z9 390 aa5.48□□□□□ -1.53
UPF3B-205ENST00000636792 ZNF69Q9UC07 566 aa5.48□□□□□ -1.53
UPF3B-205ENST00000636792 NUP50Q9UKX7 468 aa5.48□□□□□ -1.53
UPF3B-205ENST00000636792 GAB2Q9UQC2 676 aa5.48□□□□□ -1.53
UPF3B-205ENST00000636792 TRAV40A0A0B4J280 105 aa5.47□□□□□ -1.53
UPF3B-205ENST00000636792 IGHV1-69DA0A0B4J2H0 117 aa5.47□□□□□ -1.53
UPF3B-205ENST00000636792 MEIOCA2RUB1 952 aa5.47□□□□□ -1.53
UPF3B-205ENST00000636792 DISC1C4P0D8 188 aa5.47□□□□□ -1.53
UPF3B-205ENST00000636792 RNASEK-C17orf49H0YIS7 233 aa5.47□□□□□ -1.53
UPF3B-205ENST00000636792 J3QR06 171 aa5.47□□□□□ -1.53
UPF3B-205ENST00000636792 TOR1AO14656 332 aa5.47□□□□□ -1.53
UPF3B-205ENST00000636792 RAB29O14966 203 aa5.47□□□□□ -1.53
UPF3B-205ENST00000636792 B3GALNT1O75752 331 aa5.47□□□□□ -1.53
UPF3B-205ENST00000636792 RAB3DO95716 219 aa5.47□□□□□ -1.53
UPF3B-205ENST00000636792 IGHV1-69P01742 117 aa5.47□□□□□ -1.53
UPF3B-205ENST00000636792 IFNA6P05013 189 aa5.47□□□□□ -1.53
UPF3B-205ENST00000636792 FCER2P06734 321 aa5.47□□□□□ -1.53
UPF3B-205ENST00000636792 FBP1P09467 338 aa5.47□□□□□ -1.53
UPF3B-205ENST00000636792 SCTP09683 121 aa5.47□□□□□ -1.53
UPF3B-205ENST00000636792 OR5H8P0DN80 308 aa5.47□□□□□ -1.53
UPF3B-205ENST00000636792 IL7P13232 177 aa5.47□□□□□ -1.53
UPF3B-205ENST00000636792 HTR1DP28221 377 aa5.47□□□□□ -1.53
UPF3B-205ENST00000636792 S100GP29377 79 aa5.47□□□□□ -1.53
UPF3B-205ENST00000636792 HRH1P35367 487 aa5.47□□□□□ -1.53
UPF3B-205ENST00000636792 DYNLT3P51808 116 aa5.47□□□□□ -1.53
UPF3B-205ENST00000636792 LUMP51884 338 aaPredicted RBP5.47□□□□□ -1.53
UPF3B-205ENST00000636792 DGCR2P98153 550 aa5.47□□□□□ -1.53
UPF3B-205ENST00000636792 ZNF816Q0VGE8 651 aaPredicted RBP5.47□□□□□ -1.53
UPF3B-205ENST00000636792 MADCAM1Q13477 382 aa5.47□□□□□ -1.53
UPF3B-205ENST00000636792 HERPUD1Q15011 391 aa5.47□□□□□ -1.53
UPF3B-205ENST00000636792 PRAMEF5Q5TYX0 476 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms