RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 SLC2A2P11168 524 aaPredicted RBP14.1□□□□□ -0.15
PNKP-225ENST00000636214 HOXD3P31249 432 aaPredicted RBP14.1□□□□□ -0.15
PNKP-225ENST00000636214 RANBP1P43487 201 aa14.1□□□□□ -0.15
PNKP-225ENST00000636214 F2RL1P55085 397 aa14.1□□□□□ -0.15
PNKP-225ENST00000636214 DCTN2Q13561 401 aaKnown RBP14.1□□□□□ -0.15
PNKP-225ENST00000636214 LIPKQ5VXJ0 399 aa14.1□□□□□ -0.15
PNKP-225ENST00000636214 OR10K2Q6IF99 312 aa14.1□□□□□ -0.15
PNKP-225ENST00000636214 C6orf201Q7Z4U5 140 aa14.1□□□□□ -0.15
PNKP-225ENST00000636214 LRRTM1Q86UE6 522 aa14.1□□□□□ -0.15
PNKP-225ENST00000636214 FAM71E2Q8N5Q1 922 aa14.1□□□□□ -0.15
PNKP-225ENST00000636214 OR6M1Q8NGM8 313 aa14.1□□□□□ -0.15
PNKP-225ENST00000636214 YPEL2Q96QA6 119 aa14.1□□□□□ -0.15
PNKP-225ENST00000636214 SULT4A1Q9BR01 284 aa14.1□□□□□ -0.15
PNKP-225ENST00000636214 URM1Q9BTM9 101 aaKnown RBP14.1□□□□□ -0.15
PNKP-225ENST00000636214 FAAP24Q9BTP7 215 aa14.1□□□□□ -0.15
PNKP-225ENST00000636214 PLSCR3Q9NRY6 295 aa14.1□□□□□ -0.15
PNKP-225ENST00000636214 KIAA1456Q9P272 454 aa14.1□□□□□ -0.15
PNKP-225ENST00000636214 K7EIL1 84 aa14.09□□□□□ -0.15
PNKP-225ENST00000636214 CCL24O00175 119 aa14.09□□□□□ -0.15
PNKP-225ENST00000636214 BLVRBP30043 206 aaPredicted RBP14.09□□□□□ -0.15
PNKP-225ENST00000636214 AQP4P55087 323 aa14.09□□□□□ -0.15
PNKP-225ENST00000636214 TRAM1Q15629 374 aa14.09□□□□□ -0.15
PNKP-225ENST00000636214 HMGN3Q15651 99 aa14.09□□□□□ -0.15
PNKP-225ENST00000636214 TMEM65Q6PI78 240 aa14.09□□□□□ -0.15
PNKP-225ENST00000636214 TMEM203Q969S6 136 aa14.09□□□□□ -0.15
PNKP-225ENST00000636214 MRPL20Q9BYC9 149 aaKnown RBP14.09□□□□□ -0.15
PNKP-225ENST00000636214 CCDC90BQ9GZT6 254 aa14.09□□□□□ -0.15
PNKP-225ENST00000636214 VCX3BQ9H321 246 aa14.09□□□□□ -0.15
PNKP-225ENST00000636214 RIMS4Q9H426 269 aaPredicted RBP14.09□□□□□ -0.15
PNKP-225ENST00000636214 LSM2Q9Y333 95 aaKnown RBP14.09□□□□□ -0.15
PNKP-225ENST00000636214 SLC22A1O15245 554 aa14.08□□□□□ -0.16
PNKP-225ENST00000636214 RGS10O43665 173 aa14.08□□□□□ -0.16
PNKP-225ENST00000636214 ARL6IP5O75915 188 aa14.08□□□□□ -0.16
PNKP-225ENST00000636214 UCHL1P09936 223 aa14.08□□□□□ -0.16
PNKP-225ENST00000636214 PSMA1P25786 263 aaKnown RBP14.08□□□□□ -0.16
PNKP-225ENST00000636214 ACTBP60709 375 aa14.08□□□□□ -0.16
PNKP-225ENST00000636214 EGFEM1PQ0D2K5 195 aa14.08□□□□□ -0.16
PNKP-225ENST00000636214 DUX3Q96PT4 197 aa14.08□□□□□ -0.16
PNKP-225ENST00000636214 P2RX4Q99571 388 aa14.08□□□□□ -0.16
PNKP-225ENST00000636214 HSPB9Q9BQS6 159 aa14.08□□□□□ -0.16
PNKP-225ENST00000636214 CHCHD6Q9BRQ6 235 aa14.08□□□□□ -0.16
PNKP-225ENST00000636214 NICN1Q9BSH3 213 aa14.08□□□□□ -0.16
PNKP-225ENST00000636214 TM2D1Q9BX74 207 aa14.08□□□□□ -0.16
PNKP-225ENST00000636214 PIPOXQ9P0Z9 390 aa14.08□□□□□ -0.16
PNKP-225ENST00000636214 MGAT4AQ9UM21 535 aa14.08□□□□□ -0.16
PNKP-225ENST00000636214 NBR2O15453 112 aa14.07□□□□□ -0.16
PNKP-225ENST00000636214 ARSBP15848 533 aa14.07□□□□□ -0.16
PNKP-225ENST00000636214 KRTAP10-11P60412 298 aa14.07□□□□□ -0.16
PNKP-225ENST00000636214 LY6G6FQ5SQ64 297 aa14.07□□□□□ -0.16
PNKP-225ENST00000636214 FAM71F2Q6NXP2 309 aa14.07□□□□□ -0.16
PNKP-225ENST00000636214 LCNL1Q6ZST4 164 aa14.07□□□□□ -0.16
PNKP-225ENST00000636214 SVOPQ8N4V2 548 aa14.07□□□□□ -0.16
PNKP-225ENST00000636214 OR5M8Q8NGP6 311 aa14.07□□□□□ -0.16
PNKP-225ENST00000636214 RAX2Q96IS3 184 aa14.07□□□□□ -0.16
PNKP-225ENST00000636214 KCTD7Q96MP8 289 aa14.07□□□□□ -0.16
PNKP-225ENST00000636214 NABP2Q9BQ15 211 aa14.07□□□□□ -0.16
PNKP-225ENST00000636214 KCNK15Q9H427 330 aa14.07□□□□□ -0.16
PNKP-225ENST00000636214 NKX1-2Q9UD57 310 aaPredicted RBP14.07□□□□□ -0.16
PNKP-225ENST00000636214 SAA2-SAA4A0A096LPE2 208 aa14.06□□□□□ -0.16
PNKP-225ENST00000636214 TMEM14DPA8MWL7 114 aa14.06□□□□□ -0.16
PNKP-225ENST00000636214 HSPA12AO43301 675 aa14.06□□□□□ -0.16
PNKP-225ENST00000636214 IGF1P05019 195 aa14.06□□□□□ -0.16
PNKP-225ENST00000636214 SAA2P0DJI9 122 aaPredicted RBP14.06□□□□□ -0.16
PNKP-225ENST00000636214 OR3A3P47888 321 aa14.06□□□□□ -0.16
PNKP-225ENST00000636214 CDX1P47902 265 aaPredicted RBP14.06□□□□□ -0.16
PNKP-225ENST00000636214 UNC119Q13432 240 aa14.06□□□□□ -0.16
PNKP-225ENST00000636214 PLGLAQ15195 96 aa14.06□□□□□ -0.16
PNKP-225ENST00000636214 P2RY14Q15391 338 aa14.06□□□□□ -0.16
PNKP-225ENST00000636214 RAB11BQ15907 218 aa14.06□□□□□ -0.16
PNKP-225ENST00000636214 ZNF833PQ6ZTB9 187 aa14.06□□□□□ -0.16
PNKP-225ENST00000636214 PARP11Q9NR21 331 aa14.06□□□□□ -0.16
PNKP-225ENST00000636214 ZNF580Q9UK33 172 aa14.06□□□□□ -0.16
PNKP-225ENST00000636214 WI2-2373I1.2A0A1W2PRP0 233 aa14.05□□□□□ -0.16
PNKP-225ENST00000636214 SLC17A2O00624 439 aa14.05□□□□□ -0.16
PNKP-225ENST00000636214 RAB29O14966 203 aa14.05□□□□□ -0.16
PNKP-225ENST00000636214 ST8SIA5O15466 376 aa14.05□□□□□ -0.16
PNKP-225ENST00000636214 IGHG4P01861 327 aa14.05□□□□□ -0.16
PNKP-225ENST00000636214 HLA-DRB1P01911 266 aa14.05□□□□□ -0.16
PNKP-225ENST00000636214 MRPS15P82914 257 aaKnown RBP14.05□□□□□ -0.16
PNKP-225ENST00000636214 DGCR2P98153 550 aa14.05□□□□□ -0.16
PNKP-225ENST00000636214 IRF3Q14653 427 aa14.05□□□□□ -0.16
PNKP-225ENST00000636214 KIR2DS1Q14954 304 aa14.05□□□□□ -0.16
PNKP-225ENST00000636214 DEFB136Q30KP8 78 aa14.05□□□□□ -0.16
PNKP-225ENST00000636214 C5orf24Q7Z6I8 188 aa14.05□□□□□ -0.16
PNKP-225ENST00000636214 RNF152Q8N8N0 203 aa14.05□□□□□ -0.16
PNKP-225ENST00000636214 C4orf3Q8WVX3 66 aa14.05□□□□□ -0.16
PNKP-225ENST00000636214 EDARADDQ8WWZ3 215 aa14.05□□□□□ -0.16
PNKP-225ENST00000636214 OR51J1Q9H342 316 aa14.05□□□□□ -0.16
PNKP-225ENST00000636214 ISYNA1Q9NPH2 558 aa14.05□□□□□ -0.16
PNKP-225ENST00000636214 SLC23A1Q9UHI7 598 aa14.05□□□□□ -0.16
PNKP-225ENST00000636214 NAPSAO96009 420 aa14.04□□□□□ -0.16
PNKP-225ENST00000636214 RPS25P62851 125 aaKnown RBP14.04□□□□□ -0.16
PNKP-225ENST00000636214 CD69Q07108 199 aa14.04□□□□□ -0.16
PNKP-225ENST00000636214 MLLT11Q13015 90 aaPredicted RBP14.04□□□□□ -0.16
PNKP-225ENST00000636214 TPBGQ13641 420 aa14.04□□□□□ -0.16
PNKP-225ENST00000636214 C5orf64Q2M2E5 130 aa14.04□□□□□ -0.16
PNKP-225ENST00000636214 LIN54Q6MZP7 749 aa14.04□□□□□ -0.16
PNKP-225ENST00000636214 ODF3L1Q8IXM7 274 aa14.04□□□□□ -0.16
PNKP-225ENST00000636214 CYYR1Q96J86 154 aa14.04□□□□□ -0.16
PNKP-225ENST00000636214 ANKRD60Q9BZ19 345 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms