RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 KIR2DS2P43631 304 aa7.67□□□□□ -1.18
HDAC9-229ENST00000622668 DVL1P1P54792 670 aaPredicted RBP7.67□□□□□ -1.18
HDAC9-229ENST00000622668 DHODHQ02127 395 aa7.67□□□□□ -1.18
HDAC9-229ENST00000622668 CST9LP1Q5W188 147 aa7.67□□□□□ -1.18
HDAC9-229ENST00000622668 WDR25Q64LD2 544 aaPredicted RBP7.67□□□□□ -1.18
HDAC9-229ENST00000622668 WDR82Q6UXN9 313 aa7.67□□□□□ -1.18
HDAC9-229ENST00000622668 NRARPQ7Z6K4 114 aa7.67□□□□□ -1.18
HDAC9-229ENST00000622668 OR4A4PQ8NGN8 299 aa7.67□□□□□ -1.18
HDAC9-229ENST00000622668 C8orf46Q8TAG6 207 aa7.67□□□□□ -1.18
HDAC9-229ENST00000622668 GON7Q9BXV9 100 aa7.67□□□□□ -1.18
HDAC9-229ENST00000622668 GHITMQ9H3K2 345 aa7.67□□□□□ -1.18
HDAC9-229ENST00000622668 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.67□□□□□ -1.18
HDAC9-229ENST00000622668 OR1A1Q9P1Q5 309 aa7.67□□□□□ -1.18
HDAC9-229ENST00000622668 OR2W1Q9Y3N9 320 aa7.67□□□□□ -1.18
HDAC9-229ENST00000622668 RP2O75695 350 aa7.66□□□□□ -1.18
HDAC9-229ENST00000622668 SIX6O95475 246 aa7.66□□□□□ -1.18
HDAC9-229ENST00000622668 IGKV3-15P01624 115 aa7.66□□□□□ -1.18
HDAC9-229ENST00000622668 ISG15P05161 165 aa7.66□□□□□ -1.18
HDAC9-229ENST00000622668 RPL27AP46776 148 aaKnown RBP7.66□□□□□ -1.18
HDAC9-229ENST00000622668 TFPI2P48307 235 aa7.66□□□□□ -1.18
HDAC9-229ENST00000622668 OR2B8PP59922 312 aa7.66□□□□□ -1.18
HDAC9-229ENST00000622668 POC1AQ8NBT0 407 aa7.66□□□□□ -1.18
HDAC9-229ENST00000622668 OR2T10Q8NGZ9 312 aa7.66□□□□□ -1.18
HDAC9-229ENST00000622668 RHOVQ96L33 236 aa7.66□□□□□ -1.18
HDAC9-229ENST00000622668 PGLYRP3Q96LB9 341 aa7.66□□□□□ -1.18
HDAC9-229ENST00000622668 WASHC3Q9Y3C0 194 aa7.66□□□□□ -1.18
HDAC9-229ENST00000622668 SSX5O60225 188 aa7.66□□□□□ -1.18
HDAC9-229ENST00000622668 MMP7P09237 267 aaPredicted RBP7.66□□□□□ -1.18
HDAC9-229ENST00000622668 INHBBP09529 407 aa7.66□□□□□ -1.18
HDAC9-229ENST00000622668 SCTP09683 121 aa7.66□□□□□ -1.18
HDAC9-229ENST00000622668 TDGF1P3P51864 188 aa7.66□□□□□ -1.18
HDAC9-229ENST00000622668 GAPTQ8N292 157 aa7.66□□□□□ -1.18
HDAC9-229ENST00000622668 PATZ1Q9HBE1 687 aaKnown RBP7.66□□□□□ -1.18
HDAC9-229ENST00000622668 TRAV20A0A0B4J274 112 aa7.66□□□□□ -1.18
HDAC9-229ENST00000622668 TSPAN9O75954 239 aa7.66□□□□□ -1.18
HDAC9-229ENST00000622668 RRASP10301 218 aa7.66□□□□□ -1.18
HDAC9-229ENST00000622668 ETV6P41212 452 aa7.66□□□□□ -1.18
HDAC9-229ENST00000622668 NSUN5P1Q3KNT7 163 aa7.66□□□□□ -1.18
HDAC9-229ENST00000622668 ACOT7LQ6ZUV0 252 aa7.66□□□□□ -1.18
HDAC9-229ENST00000622668 OR8H3Q8N146 312 aa7.66□□□□□ -1.18
HDAC9-229ENST00000622668 DMRTA2Q96SC8 542 aa7.66□□□□□ -1.18
HDAC9-229ENST00000622668 NMES1Q9C002 83 aa7.66□□□□□ -1.18
HDAC9-229ENST00000622668 PRSS22Q9GZN4 317 aa7.66□□□□□ -1.18
HDAC9-229ENST00000622668 SLC25A22Q9H936 323 aa7.66□□□□□ -1.18
HDAC9-229ENST00000622668 CACNG5Q9UF02 275 aa7.66□□□□□ -1.18
HDAC9-229ENST00000622668 TMEM178BH3BS89 294 aa7.66□□□□□ -1.18
HDAC9-229ENST00000622668 LYPD3O95274 346 aa7.66□□□□□ -1.18
HDAC9-229ENST00000622668 ZNF14P17017 642 aaPredicted RBP7.66□□□□□ -1.18
HDAC9-229ENST00000622668 ELLP55199 621 aaPredicted RBP7.66□□□□□ -1.18
HDAC9-229ENST00000622668 SSTP61278 116 aa7.66□□□□□ -1.18
HDAC9-229ENST00000622668 ARL16Q0P5N6 197 aa7.66□□□□□ -1.18
HDAC9-229ENST00000622668 COLCA1Q6ZS62 124 aa7.66□□□□□ -1.18
HDAC9-229ENST00000622668 HS3ST6Q96QI5 342 aa7.66□□□□□ -1.18
HDAC9-229ENST00000622668 EIF5A2Q9GZV4 153 aaKnown RBP7.66□□□□□ -1.18
HDAC9-229ENST00000622668 CACFD1Q9UGQ2 172 aa7.66□□□□□ -1.18
HDAC9-229ENST00000622668 CDC42EP3Q9UKI2 254 aa7.66□□□□□ -1.18
HDAC9-229ENST00000622668 PRRC2CQ9Y520 2896 aaKnown RBP7.65□□□□□ -1.18
HDAC9-229ENST00000622668 CHST1O43916 411 aa7.65□□□□□ -1.18
HDAC9-229ENST00000622668 IGKV1D-33P01593 117 aa7.65□□□□□ -1.18
HDAC9-229ENST00000622668 IGKV1-33P01594 117 aa7.65□□□□□ -1.18
HDAC9-229ENST00000622668 CSN1S1P47710 185 aa7.65□□□□□ -1.18
HDAC9-229ENST00000622668 ALDH3B2P48448 385 aa7.65□□□□□ -1.18
HDAC9-229ENST00000622668 PAFAH1B2P68402 229 aa7.65□□□□□ -1.18
HDAC9-229ENST00000622668 IGSF11Q5DX21 431 aa7.65□□□□□ -1.18
HDAC9-229ENST00000622668 ZNF546Q86UE3 836 aa7.65□□□□□ -1.18
HDAC9-229ENST00000622668 FAM90A1Q86YD7 464 aa7.65□□□□□ -1.18
HDAC9-229ENST00000622668 OR10A7Q8NGE5 316 aa7.65□□□□□ -1.18
HDAC9-229ENST00000622668 KCNIP2Q9NS61 270 aa7.65□□□□□ -1.18
HDAC9-229ENST00000622668 PSENENQ9NZ42 101 aa7.65□□□□□ -1.18
HDAC9-229ENST00000622668 MTCH1Q9NZJ7 389 aa7.65□□□□□ -1.18
HDAC9-229ENST00000622668 MYLKQ15746 1914 aa7.65□□□□□ -1.18
HDAC9-229ENST00000622668 PTTG1O95997 202 aa7.65□□□□□ -1.18
HDAC9-229ENST00000622668 GALP22466 123 aa7.65□□□□□ -1.18
HDAC9-229ENST00000622668 PPOXP50336 477 aa7.65□□□□□ -1.18
HDAC9-229ENST00000622668 EFNB2P52799 333 aa7.65□□□□□ -1.18
HDAC9-229ENST00000622668 SMIM4Q8WVI0 70 aa7.65□□□□□ -1.18
HDAC9-229ENST00000622668 NABP1Q96AH0 204 aa7.65□□□□□ -1.18
HDAC9-229ENST00000622668 SSX3Q99909 188 aa7.65□□□□□ -1.18
HDAC9-229ENST00000622668 IL36RNQ9UBH0 155 aa7.65□□□□□ -1.18
HDAC9-229ENST00000622668 OR7C2O60412 319 aa7.65□□□□□ -1.19
HDAC9-229ENST00000622668 TMEM127O75204 238 aa7.65□□□□□ -1.19
HDAC9-229ENST00000622668 PTBP3O95758 552 aaKnown RBP7.65□□□□□ -1.19
HDAC9-229ENST00000622668 FAM76BQ5HYJ3 339 aa7.65□□□□□ -1.19
HDAC9-229ENST00000622668 UNQ9370/PRO34162Q6UXP9 181 aa7.65□□□□□ -1.19
HDAC9-229ENST00000622668 RBPMS2Q6ZRY4 209 aaKnown RBP7.65□□□□□ -1.19
HDAC9-229ENST00000622668 OR1L8Q8NGR8 309 aa7.65□□□□□ -1.19
HDAC9-229ENST00000622668 CLDND2Q8NHS1 167 aa7.65□□□□□ -1.19
HDAC9-229ENST00000622668 C11orf54Q9H0W9 315 aaPredicted RBP7.65□□□□□ -1.19
HDAC9-229ENST00000622668 C20orf85Q9H1P6 137 aa7.65□□□□□ -1.19
HDAC9-229ENST00000622668 BEX4Q9NWD9 120 aaPredicted RBP7.65□□□□□ -1.19
HDAC9-229ENST00000622668 TAS2R3Q9NYW6 316 aa7.65□□□□□ -1.19
HDAC9-229ENST00000622668 IGHV3-35A0A0C4DH35 117 aa7.64□□□□□ -1.19
HDAC9-229ENST00000622668 RHOBP62745 196 aa7.64□□□□□ -1.19
HDAC9-229ENST00000622668 MBNL2Q5VZF2 373 aaKnown RBP7.64□□□□□ -1.19
HDAC9-229ENST00000622668 HCP5Q6MZN7 132 aa7.64□□□□□ -1.19
HDAC9-229ENST00000622668 OR1S2Q8NGQ3 325 aa7.64□□□□□ -1.19
HDAC9-229ENST00000622668 SERTAD4Q9NUC0 356 aa7.64□□□□□ -1.19
HDAC9-229ENST00000622668 SPDEFO95238 335 aa7.64□□□□□ -1.19
HDAC9-229ENST00000622668 TAS2R30P59541 319 aa7.64□□□□□ -1.19
HDAC9-229ENST00000622668 SAXO1Q8IYX7 474 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms