RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 CD300LFQ8TDQ1 290 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 GNPDA2Q8TDQ7 276 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 UBLCP1Q8WVY7 318 aaPredicted RBP1.68□□□□□ -2.14
CPNE3-211ENST00000621526 ASB17Q8WXJ9 295 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 PP6455Q8WZ26 134 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 ARL11Q969Q4 196 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 TPD52L3Q96J77 140 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 OR52B2Q96RD2 323 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 AMELYQ99218 206 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 TSNAXQ99598 290 aaKnown RBP1.68□□□□□ -2.14
CPNE3-211ENST00000621526 FAM103A1Q9BTL3 118 aaKnown RBP1.68□□□□□ -2.14
CPNE3-211ENST00000621526 CHRDL1Q9BU40 450 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 CCDC28BQ9BUN5 200 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 YIPF3Q9GZM5 350 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 FBXL15Q9H469 300 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 IFT22Q9H7X7 185 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 Q9H8V8 135 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 SLC2A9Q9NRM0 540 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 SMPD3Q9NY59 655 aaPredicted RBP1.68□□□□□ -2.14
CPNE3-211ENST00000621526 IL36RNQ9UBH0 155 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 LGALS13Q9UHV8 139 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 ZNF230Q9UIE0 474 aaPredicted RBP1.68□□□□□ -2.14
CPNE3-211ENST00000621526 ZNF221Q9UK13 617 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 KLK9Q9UKQ9 250 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 GAB2Q9UQC2 676 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 AP3M1Q9Y2T2 418 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 EXOSC1Q9Y3B2 195 aaKnown RBP1.68□□□□□ -2.14
CPNE3-211ENST00000621526 UFC1Q9Y3C8 167 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 TMEM14AQ9Y6G1 99 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 A3GALT2U3KPV4 340 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 V9GYQ6 96 aa1.68□□□□□ -2.14
CPNE3-211ENST00000621526 PKHD1L1Q86WI1 4243 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 TRAV24A0A0B4J272 114 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 IGKV1-12A0A0C4DH73 117 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 TRBV4-1A0A0J9YWV2 114 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 TEX48A0A1B0GUV7 120 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 A0A1B0GW64 132 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 TLDC2A0PJX2 215 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 ZNF320A2RRD8 509 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 TMEM189A5PLL7 270 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 SMIM9A6NGZ8 99 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 OR5H14A6NHG9 310 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 FAM220BPB1ANY3 271 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 H0YJX3 145 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 K7EMT4 169 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 RAB29O14966 203 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 SPINT2O43291 252 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 SULT1B1O43704 296 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 SNX3O60493 162 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 YPEL1O60688 119 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 SRSF10O75494 262 aaKnown RBP1.67□□□□□ -2.14
CPNE3-211ENST00000621526 KRT36O76013 467 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 DFFBO76075 338 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 SPDEFO95238 335 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 IFNGP01579 166 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 IGKV1D-12P01611 117 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 CRYGBP07316 175 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 GIG44P09565 113 aaPredicted RBP1.67□□□□□ -2.14
CPNE3-211ENST00000621526 OR9G9P0C7N8 305 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 CT45A6P0DMU7 189 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 CT45A5P0DMU8 189 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 CT45A7P0DMV0 189 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 CASQ1P31415 396 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 SSTR5P35346 364 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 ASIPP42127 132 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 CCL18P55774 89 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 HTD2P86397 168 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 CRMP1Q14194 572 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 IL13RA2Q14627 380 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 IRF3Q14653 427 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 ATXN7L3Q14CW9 347 aaPredicted RBP1.67□□□□□ -2.14
CPNE3-211ENST00000621526 PLGLAQ15195 96 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 USF2Q15853 346 aaPredicted RBP1.67□□□□□ -2.14
CPNE3-211ENST00000621526 LTC4SQ16873 150 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 ZNF829Q3KNS6 432 aaPredicted RBP1.67□□□□□ -2.14
CPNE3-211ENST00000621526 ZNF585BQ52M93 769 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 AGKQ53H12 422 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 PAN3Q58A45 887 aaKnown RBP1.67□□□□□ -2.14
CPNE3-211ENST00000621526 TTC32Q5I0X7 151 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 SLC35D3Q5M8T2 416 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 SAMD4BQ5PRF9 694 aaKnown RBP1.67□□□□□ -2.14
CPNE3-211ENST00000621526 C6orf141Q5SZD1 244 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 ZNF529Q6P280 563 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 ZNF833PQ6ZTB9 187 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 RASSF6Q6ZTQ3 369 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 FKBP9P1Q75LS8 142 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 UTS2BQ765I0 119 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 VTCN1Q7Z7D3 282 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 SLC25A42Q86VD7 318 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 COMMD2Q86X83 199 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 ERI1Q8IV48 349 aaKnown RBP1.67□□□□□ -2.14
CPNE3-211ENST00000621526 ODF3L1Q8IXM7 274 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 TTC9CQ8N5M4 171 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 CSNK1G2-AS1Q8NCQ2 148 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 BBS1Q8NFJ9 593 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 PXT1Q8NFP0 134 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 OR6K6Q8NGW6 343 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 OR6N2Q8NGY6 317 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 OR5B3Q8NH48 314 aa1.67□□□□□ -2.14
CPNE3-211ENST00000621526 KCNG3Q8TAE7 436 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms