RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 ZNF554Q86TJ5 538 aa16.16■□□□□ 0.18
TRAPPC3-208ENST00000616074 NKAIN3Q8N8D7 197 aa16.16■□□□□ 0.18
TRAPPC3-208ENST00000616074 ZNF491Q8N8L2 437 aa16.16■□□□□ 0.18
TRAPPC3-208ENST00000616074 SETD9Q8NE22 299 aa16.16■□□□□ 0.18
TRAPPC3-208ENST00000616074 OR51J1Q9H342 316 aa16.16■□□□□ 0.18
TRAPPC3-208ENST00000616074 PARP11Q9NR21 331 aa16.16■□□□□ 0.18
TRAPPC3-208ENST00000616074 NBR2O15453 112 aa16.15■□□□□ 0.18
TRAPPC3-208ENST00000616074 IGLV1-40P01703 118 aa16.15■□□□□ 0.18
TRAPPC3-208ENST00000616074 OR3A3P47888 321 aa16.15■□□□□ 0.18
TRAPPC3-208ENST00000616074 GNB1P62873 340 aa16.15■□□□□ 0.18
TRAPPC3-208ENST00000616074 HTD2P86397 168 aa16.15■□□□□ 0.18
TRAPPC3-208ENST00000616074 LRRC36Q1X8D7 754 aa16.15■□□□□ 0.18
TRAPPC3-208ENST00000616074 C6orf141Q5SZD1 244 aa16.15■□□□□ 0.18
TRAPPC3-208ENST00000616074 ZNF833PQ6ZTB9 187 aa16.15■□□□□ 0.18
TRAPPC3-208ENST00000616074 OR1N2Q8NGR9 330 aa16.15■□□□□ 0.18
TRAPPC3-208ENST00000616074 OR5B12Q96R08 314 aa16.15■□□□□ 0.18
TRAPPC3-208ENST00000616074 ZNF251Q9BRH9 671 aa16.15■□□□□ 0.18
TRAPPC3-208ENST00000616074 ANKRD60Q9BZ19 345 aa16.15■□□□□ 0.18
TRAPPC3-208ENST00000616074 VSIG4Q9Y279 399 aa16.15■□□□□ 0.18
TRAPPC3-208ENST00000616074 EFCAB10A6NFE3 127 aa16.14■□□□□ 0.17
TRAPPC3-208ENST00000616074 YPEL1O60688 119 aa16.14■□□□□ 0.17
TRAPPC3-208ENST00000616074 OR8U8P0C7N1 319 aa16.14■□□□□ 0.17
TRAPPC3-208ENST00000616074 CELP19835 753 aa16.14■□□□□ 0.17
TRAPPC3-208ENST00000616074 BLVRBP30043 206 aaPredicted RBP16.14■□□□□ 0.17
TRAPPC3-208ENST00000616074 RUNX1Q01196 453 aa16.14■□□□□ 0.17
TRAPPC3-208ENST00000616074 ZNF616Q08AN1 781 aa16.14■□□□□ 0.17
TRAPPC3-208ENST00000616074 YPEL2Q96QA6 119 aa16.14■□□□□ 0.17
TRAPPC3-208ENST00000616074 UQCC2Q9BRT2 126 aa16.14■□□□□ 0.17
TRAPPC3-208ENST00000616074 SAA2-SAA4A0A096LPE2 208 aa16.13■□□□□ 0.17
TRAPPC3-208ENST00000616074 TRAV41A0A0B4J266 112 aa16.13■□□□□ 0.17
TRAPPC3-208ENST00000616074 CD1AP06126 327 aa16.13■□□□□ 0.17
TRAPPC3-208ENST00000616074 SAA2P0DJI9 122 aaPredicted RBP16.13■□□□□ 0.17
TRAPPC3-208ENST00000616074 C5orf64Q2M2E5 130 aa16.13■□□□□ 0.17
TRAPPC3-208ENST00000616074 SULT4A1Q9BR01 284 aa16.13■□□□□ 0.17
TRAPPC3-208ENST00000616074 CST11Q9H112 138 aa16.13■□□□□ 0.17
TRAPPC3-208ENST00000616074 MYL12BO14950 172 aa16.12■□□□□ 0.17
TRAPPC3-208ENST00000616074 RGS11O94810 467 aa16.12■□□□□ 0.17
TRAPPC3-208ENST00000616074 NDUFA3O95167 84 aa16.12■□□□□ 0.17
TRAPPC3-208ENST00000616074 LY86O95711 162 aa16.12■□□□□ 0.17
TRAPPC3-208ENST00000616074 CHATP28329 748 aa16.12■□□□□ 0.17
TRAPPC3-208ENST00000616074 RAB9AP51151 201 aa16.12■□□□□ 0.17
TRAPPC3-208ENST00000616074 INSL3P51460 131 aa16.12■□□□□ 0.17
TRAPPC3-208ENST00000616074 WNT4P56705 351 aa16.12■□□□□ 0.17
TRAPPC3-208ENST00000616074 NDPQ00604 133 aa16.12■□□□□ 0.17
TRAPPC3-208ENST00000616074 HMGN3Q15651 99 aa16.12■□□□□ 0.17
TRAPPC3-208ENST00000616074 LY6G6FQ5SQ64 297 aa16.12■□□□□ 0.17
TRAPPC3-208ENST00000616074 LAIR2Q6ISS4 152 aa16.12■□□□□ 0.17
TRAPPC3-208ENST00000616074 LIN54Q6MZP7 749 aa16.12■□□□□ 0.17
TRAPPC3-208ENST00000616074 DHRSXQ8N5I4 330 aa16.12■□□□□ 0.17
TRAPPC3-208ENST00000616074 NPBQ8NG41 125 aa16.12■□□□□ 0.17
TRAPPC3-208ENST00000616074 OR2AK2Q8NG84 335 aa16.12■□□□□ 0.17
TRAPPC3-208ENST00000616074 GALMQ96C23 342 aa16.12■□□□□ 0.17
TRAPPC3-208ENST00000616074 IFI27L2Q9H2X8 130 aa16.12■□□□□ 0.17
TRAPPC3-208ENST00000616074 CNOT2Q9NZN8 540 aaKnown RBP16.12■□□□□ 0.17
TRAPPC3-208ENST00000616074 GHRLQ9UBU3 117 aa16.12■□□□□ 0.17
TRAPPC3-208ENST00000616074 SORL1Q92673 2214 aa16.12■□□□□ 0.17
TRAPPC3-208ENST00000616074 MAPK3P27361 379 aaPredicted RBP16.11■□□□□ 0.17
TRAPPC3-208ENST00000616074 INSL4Q14641 139 aa16.11■□□□□ 0.17
TRAPPC3-208ENST00000616074 OR10K2Q6IF99 312 aa16.11■□□□□ 0.17
TRAPPC3-208ENST00000616074 AHSA2Q719I0 299 aa16.11■□□□□ 0.17
TRAPPC3-208ENST00000616074 MINDY2Q8NBR6 621 aa16.11■□□□□ 0.17
TRAPPC3-208ENST00000616074 DCUN1D4Q92564 292 aa16.11■□□□□ 0.17
TRAPPC3-208ENST00000616074 ALX4Q9H161 411 aaPredicted RBP16.11■□□□□ 0.17
TRAPPC3-208ENST00000616074 ISYNA1Q9NPH2 558 aa16.11■□□□□ 0.17
TRAPPC3-208ENST00000616074 KIAA1456Q9P272 454 aa16.11■□□□□ 0.17
TRAPPC3-208ENST00000616074 PSORS1C1Q9UIG5 152 aa16.11■□□□□ 0.17
TRAPPC3-208ENST00000616074 FBXO7Q9Y3I1 522 aa16.11■□□□□ 0.17
TRAPPC3-208ENST00000616074 ST8SIA5O15466 376 aa16.1■□□□□ 0.17
TRAPPC3-208ENST00000616074 GNAO1P09471 354 aa16.1■□□□□ 0.17
TRAPPC3-208ENST00000616074 ECSCRQ19T08 205 aa16.1■□□□□ 0.17
TRAPPC3-208ENST00000616074 FAM131AQ6UXB0 335 aa16.1■□□□□ 0.17
TRAPPC3-208ENST00000616074 PACRGLQ8N7B6 248 aa16.1■□□□□ 0.17
TRAPPC3-208ENST00000616074 THRSPQ92748 146 aa16.1■□□□□ 0.17
TRAPPC3-208ENST00000616074 NEDD4LQ96PU5 975 aa16.1■□□□□ 0.17
TRAPPC3-208ENST00000616074 FAAP24Q9BTP7 215 aa16.1■□□□□ 0.17
TRAPPC3-208ENST00000616074 LRRC42Q9Y546 428 aa16.1■□□□□ 0.17
TRAPPC3-208ENST00000616074 SMAD5-AS1Q9Y6J3 95 aa16.1■□□□□ 0.17
TRAPPC3-208ENST00000616074 DYNC2H1Q8NCM8 4307 aaKnown RBP16.1■□□□□ 0.17
TRAPPC3-208ENST00000616074 OVOL1O14753 267 aa16.09■□□□□ 0.17
TRAPPC3-208ENST00000616074 SOX15O60248 233 aa16.09■□□□□ 0.17
TRAPPC3-208ENST00000616074 UBBP0CG47 229 aa16.09■□□□□ 0.17
TRAPPC3-208ENST00000616074 RPS27AP62979 156 aaKnown RBP16.09■□□□□ 0.17
TRAPPC3-208ENST00000616074 C19orf54Q5BKX5 351 aa16.09■□□□□ 0.17
TRAPPC3-208ENST00000616074 FAM27D1Q5T7N8 215 aa16.09■□□□□ 0.17
TRAPPC3-208ENST00000616074 FAM71F2Q6NXP2 309 aa16.09■□□□□ 0.17
TRAPPC3-208ENST00000616074 C6orf201Q7Z4U5 140 aa16.09■□□□□ 0.17
TRAPPC3-208ENST00000616074 ZNF429Q86V71 674 aa16.09■□□□□ 0.17
TRAPPC3-208ENST00000616074 SVOPQ8N4V2 548 aa16.09■□□□□ 0.17
TRAPPC3-208ENST00000616074 NANOGP1Q8N7R0 232 aa16.09■□□□□ 0.17
TRAPPC3-208ENST00000616074 IL1F10Q8WWZ1 152 aa16.09■□□□□ 0.17
TRAPPC3-208ENST00000616074 KCNK15Q9H427 330 aa16.09■□□□□ 0.17
TRAPPC3-208ENST00000616074 C8orf4Q9NR00 106 aa16.09■□□□□ 0.17
TRAPPC3-208ENST00000616074 ABRACLQ9P1F3 81 aa16.09■□□□□ 0.17
TRAPPC3-208ENST00000616074 RYR2Q92736 4967 aa16.08■□□□□ 0.17
TRAPPC3-208ENST00000616074 A0A1W2PN81 502 aa16.08■□□□□ 0.16
TRAPPC3-208ENST00000616074 CHRNA7P36544 502 aa16.08■□□□□ 0.16
TRAPPC3-208ENST00000616074 SLURP1P55000 103 aa16.08■□□□□ 0.16
TRAPPC3-208ENST00000616074 RPL39P5Q59GN2 51 aa16.08■□□□□ 0.16
TRAPPC3-208ENST00000616074 LRRTM1Q86UE6 522 aa16.08■□□□□ 0.16
TRAPPC3-208ENST00000616074 C8orf59Q8N0T1 100 aaPredicted RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms