RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 LOC105371242A0A075B767 164 aa8.91□□□□□ -0.98
COL4A1-205ENST00000615732 FXYD6-FXYD2A0A087WZ82 144 aa8.91□□□□□ -0.98
COL4A1-205ENST00000615732 CRYM-AS1A6NIL9 109 aa8.91□□□□□ -0.98
COL4A1-205ENST00000615732 TSC22D2O75157 780 aa8.91□□□□□ -0.98
COL4A1-205ENST00000615732 SNAPC5O75971 98 aa8.91□□□□□ -0.98
COL4A1-205ENST00000615732 TNFRSF1AP19438 455 aa8.91□□□□□ -0.98
COL4A1-205ENST00000615732 LMO1P25800 156 aa8.91□□□□□ -0.98
COL4A1-205ENST00000615732 PRDX2P32119 198 aa8.91□□□□□ -0.98
COL4A1-205ENST00000615732 CD80P33681 288 aa8.91□□□□□ -0.98
COL4A1-205ENST00000615732 CFHR2P36980 270 aa8.91□□□□□ -0.98
COL4A1-205ENST00000615732 GATA4P43694 442 aa8.91□□□□□ -0.98
COL4A1-205ENST00000615732 COMPP49747 757 aaPredicted RBP8.91□□□□□ -0.98
COL4A1-205ENST00000615732 H2BFSP57053 126 aa8.91□□□□□ -0.98
COL4A1-205ENST00000615732 C6orf183Q5T699 404 aa8.91□□□□□ -0.98
COL4A1-205ENST00000615732 SLC35E4Q6ICL7 350 aa8.91□□□□□ -0.98
COL4A1-205ENST00000615732 FAM185AQ8N0U4 392 aa8.91□□□□□ -0.98
COL4A1-205ENST00000615732 C9orf62Q8N4C0 152 aa8.91□□□□□ -0.98
COL4A1-205ENST00000615732 SECTM1Q8WVN6 248 aa8.91□□□□□ -0.98
COL4A1-205ENST00000615732 IL1F10Q8WWZ1 152 aa8.91□□□□□ -0.98
COL4A1-205ENST00000615732 KIRREL1Q96J84 757 aa8.91□□□□□ -0.98
COL4A1-205ENST00000615732 CABLES2Q9BTV7 478 aa8.91□□□□□ -0.98
COL4A1-205ENST00000615732 EGLN1Q9GZT9 426 aa8.91□□□□□ -0.98
COL4A1-205ENST00000615732 SLC5A7Q9GZV3 580 aa8.91□□□□□ -0.98
COL4A1-205ENST00000615732 SLA2Q9H6Q3 261 aa8.91□□□□□ -0.98
COL4A1-205ENST00000615732 NAA60Q9H7X0 242 aa8.91□□□□□ -0.98
COL4A1-205ENST00000615732 RAB18Q9NP72 206 aa8.91□□□□□ -0.98
COL4A1-205ENST00000615732 PLSCR3Q9NRY6 295 aa8.91□□□□□ -0.98
COL4A1-205ENST00000615732 DECR2Q9NUI1 292 aa8.91□□□□□ -0.98
COL4A1-205ENST00000615732 RNF7Q9UBF6 113 aa8.91□□□□□ -0.98
COL4A1-205ENST00000615732 PCDHB10Q9UN67 800 aa8.91□□□□□ -0.98
COL4A1-205ENST00000615732 IGHV3OR15-7A0A075B7D8 119 aa8.9□□□□□ -0.98
COL4A1-205ENST00000615732 C13orf42A0A1B0GVH6 325 aa8.9□□□□□ -0.98
COL4A1-205ENST00000615732 LRRC30A6NM36 301 aa8.9□□□□□ -0.98
COL4A1-205ENST00000615732 C17orf100A8MU93 164 aa8.9□□□□□ -0.98
COL4A1-205ENST00000615732 GPR31O00270 319 aa8.9□□□□□ -0.98
COL4A1-205ENST00000615732 HSPA12AO43301 675 aa8.9□□□□□ -0.98
COL4A1-205ENST00000615732 AVPP01185 164 aa8.9□□□□□ -0.98
COL4A1-205ENST00000615732 IFNA21P01568 189 aa8.9□□□□□ -0.98
COL4A1-205ENST00000615732 HLA-GP17693 338 aa8.9□□□□□ -0.98
COL4A1-205ENST00000615732 RCC1P18754 421 aaPredicted RBP8.9□□□□□ -0.98
COL4A1-205ENST00000615732 EPHA1P21709 976 aa8.9□□□□□ -0.98
COL4A1-205ENST00000615732 OR3A1P47881 315 aa8.9□□□□□ -0.98
COL4A1-205ENST00000615732 LMO4P61968 165 aa8.9□□□□□ -0.98
COL4A1-205ENST00000615732 HMGN3Q15651 99 aa8.9□□□□□ -0.98
COL4A1-205ENST00000615732 ANKRD55Q3KP44 614 aa8.9□□□□□ -0.98
COL4A1-205ENST00000615732 KRBOX4Q5JUW0 171 aa8.9□□□□□ -0.98
COL4A1-205ENST00000615732 LY6G6FQ5SQ64 297 aa8.9□□□□□ -0.98
COL4A1-205ENST00000615732 C1orf229Q6ZS94 237 aaPredicted RBP8.9□□□□□ -0.98
COL4A1-205ENST00000615732 PRR18Q8N4B5 295 aa8.9□□□□□ -0.98
COL4A1-205ENST00000615732 OR11H4Q8NGC9 324 aa8.9□□□□□ -0.98
COL4A1-205ENST00000615732 RTN4IP1Q8WWV3 396 aaPredicted RBP8.9□□□□□ -0.98
COL4A1-205ENST00000615732 RSRP1Q9BUV0 290 aa8.9□□□□□ -0.98
COL4A1-205ENST00000615732 ZNF665Q9H7R5 613 aa8.9□□□□□ -0.98
COL4A1-205ENST00000615732 METTL8Q9H825 291 aaKnown RBP8.9□□□□□ -0.98
COL4A1-205ENST00000615732 SLC2A9Q9NRM0 540 aa8.9□□□□□ -0.98
COL4A1-205ENST00000615732 RBM7Q9Y580 266 aaKnown RBP8.9□□□□□ -0.98
COL4A1-205ENST00000615732 TRAV39A0A0B4J263 110 aa8.89□□□□□ -0.99
COL4A1-205ENST00000615732 OOEPA6NGQ2 149 aa8.89□□□□□ -0.99
COL4A1-205ENST00000615732 NKX6-3A6NJ46 265 aa8.89□□□□□ -0.99
COL4A1-205ENST00000615732 L7N2F9 121 aa8.89□□□□□ -0.99
COL4A1-205ENST00000615732 HSD17B6O14756 317 aa8.89□□□□□ -0.99
COL4A1-205ENST00000615732 PSPNO60542 156 aa8.89□□□□□ -0.99
COL4A1-205ENST00000615732 TUSC2O75896 110 aa8.89□□□□□ -0.99
COL4A1-205ENST00000615732 CD55P08174 381 aa8.89□□□□□ -0.99
COL4A1-205ENST00000615732 ADH4P08319 380 aa8.89□□□□□ -0.99
COL4A1-205ENST00000615732 PSG2P11465 335 aa8.89□□□□□ -0.99
COL4A1-205ENST00000615732 SUPT4H1P63272 117 aaKnown RBP8.89□□□□□ -0.99
COL4A1-205ENST00000615732 CYCSP99999 105 aaKnown RBP8.89□□□□□ -0.99
COL4A1-205ENST00000615732 HOXA4Q00056 320 aaPredicted RBP8.89□□□□□ -0.99
COL4A1-205ENST00000615732 EDDM3AQ14507 147 aa8.89□□□□□ -0.99
COL4A1-205ENST00000615732 HERPUD1Q15011 391 aa8.89□□□□□ -0.99
COL4A1-205ENST00000615732 TRAT1Q6PIZ9 186 aa8.89□□□□□ -0.99
COL4A1-205ENST00000615732 H1FOOQ8IZA3 346 aaPredicted RBP8.89□□□□□ -0.99
COL4A1-205ENST00000615732 GAPTQ8N292 157 aa8.89□□□□□ -0.99
COL4A1-205ENST00000615732 GCSAMQ8N6F7 178 aa8.89□□□□□ -0.99
COL4A1-205ENST00000615732 CD177Q8N6Q3 437 aa8.89□□□□□ -0.99
COL4A1-205ENST00000615732 Q8TCH9 128 aa8.89□□□□□ -0.99
COL4A1-205ENST00000615732 ZNF418Q8TF45 676 aaPredicted RBP8.89□□□□□ -0.99
COL4A1-205ENST00000615732 SNX22Q96L94 193 aa8.89□□□□□ -0.99
COL4A1-205ENST00000615732 SUCNR1Q9BXA5 334 aa8.89□□□□□ -0.99
COL4A1-205ENST00000615732 GON7Q9BXV9 100 aa8.89□□□□□ -0.99
COL4A1-205ENST00000615732 SEBOXQ9HB31 216 aaPredicted RBP8.89□□□□□ -0.99
COL4A1-205ENST00000615732 TAF9BQ9HBM6 251 aa8.89□□□□□ -0.99
COL4A1-205ENST00000615732 PRR13Q9NZ81 148 aa8.89□□□□□ -0.99
COL4A1-205ENST00000615732 KIF25Q9UIL4 384 aa8.89□□□□□ -0.99
COL4A1-205ENST00000615732 PPP1R3CQ9UQK1 317 aa8.89□□□□□ -0.99
COL4A1-205ENST00000615732 PKD1L1Q8TDX9 2849 aa8.89□□□□□ -0.99
COL4A1-205ENST00000615732 TRBV6-7A0A0A0MS04 114 aa8.88□□□□□ -0.99
COL4A1-205ENST00000615732 IGKV1-6A0A0C4DH72 117 aa8.88□□□□□ -0.99
COL4A1-205ENST00000615732 IGHV1-69-2A0A0G2JMI3 117 aa8.88□□□□□ -0.99
COL4A1-205ENST00000615732 TMEM89A2RUT3 159 aa8.88□□□□□ -0.99
COL4A1-205ENST00000615732 DBX1A6NMT0 343 aa8.88□□□□□ -0.99
COL4A1-205ENST00000615732 NPIPB11E5RHQ5 1161 aa8.88□□□□□ -0.99
COL4A1-205ENST00000615732 G3V3Q6 166 aa8.88□□□□□ -0.99
COL4A1-205ENST00000615732 CYB5R3P00387 301 aaPredicted RBP8.88□□□□□ -0.99
COL4A1-205ENST00000615732 TFF1P04155 84 aa8.88□□□□□ -0.99
COL4A1-205ENST00000615732 HOXB5P09067 269 aa8.88□□□□□ -0.99
COL4A1-205ENST00000615732 OR5AC1P0C628 307 aa8.88□□□□□ -0.99
COL4A1-205ENST00000615732 RPS2P15880 293 aaKnown RBP8.88□□□□□ -0.99
COL4A1-205ENST00000615732 LUMP51884 338 aaPredicted RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms