RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 UMODP07911 640 aa7.72□□□□□ -1.17
TTC28-208ENST00000612946 RASL11AQ6T310 242 aa7.72□□□□□ -1.17
TTC28-208ENST00000612946 C1orf174Q8IYL3 243 aa7.72□□□□□ -1.17
TTC28-208ENST00000612946 FADS6Q8N9I5 356 aa7.72□□□□□ -1.17
TTC28-208ENST00000612946 FGF13Q92913 245 aa7.72□□□□□ -1.17
TTC28-208ENST00000612946 WBP2Q969T9 261 aa7.72□□□□□ -1.17
TTC28-208ENST00000612946 H3BNC9 293 aa7.72□□□□□ -1.17
TTC28-208ENST00000612946 MPLP40238 635 aa7.72□□□□□ -1.17
TTC28-208ENST00000612946 UQCRFS1P47985 274 aa7.72□□□□□ -1.17
TTC28-208ENST00000612946 PAQR9Q6ZVX9 377 aa7.72□□□□□ -1.17
TTC28-208ENST00000612946 AMMECR1Q9Y4X0 333 aaPredicted RBP7.72□□□□□ -1.17
TTC28-208ENST00000612946 B3GALT4O96024 378 aa7.71□□□□□ -1.17
TTC28-208ENST00000612946 RPS16P62249 146 aaKnown RBP7.71□□□□□ -1.17
TTC28-208ENST00000612946 IZUMO4Q1ZYL8 232 aa7.71□□□□□ -1.17
TTC28-208ENST00000612946 DNM1P46Q6ZS02 220 aa7.71□□□□□ -1.17
TTC28-208ENST00000612946 GLRX5Q86SX6 157 aa7.71□□□□□ -1.17
TTC28-208ENST00000612946 RBPJLQ9UBG7 517 aa7.71□□□□□ -1.17
TTC28-208ENST00000612946 WNT16Q9UBV4 365 aa7.71□□□□□ -1.17
TTC28-208ENST00000612946 EDDM3AQ14507 147 aa7.71□□□□□ -1.17
TTC28-208ENST00000612946 RGP1Q92546 391 aaPredicted RBP7.71□□□□□ -1.17
TTC28-208ENST00000612946 TIMP4Q99727 224 aa7.71□□□□□ -1.17
TTC28-208ENST00000612946 ZNF355PQ9NSJ1 428 aa7.71□□□□□ -1.17
TTC28-208ENST00000612946 MPC1Q9Y5U8 109 aa7.71□□□□□ -1.17
TTC28-208ENST00000612946 TMEM30BQ3MIR4 351 aa7.71□□□□□ -1.17
TTC28-208ENST00000612946 DMRTA2Q96SC8 542 aa7.71□□□□□ -1.17
TTC28-208ENST00000612946 SPINK4O60575 86 aa7.71□□□□□ -1.18
TTC28-208ENST00000612946 KLK2P20151 261 aa7.71□□□□□ -1.18
TTC28-208ENST00000612946 MOGAT3Q86VF5 341 aa7.71□□□□□ -1.18
TTC28-208ENST00000612946 PKDREJQ9NTG1 2253 aa7.71□□□□□ -1.18
TTC28-208ENST00000612946 LTBP4Q8N2S1 1624 aa7.71□□□□□ -1.18
TTC28-208ENST00000612946 ZNF816Q0VGE8 651 aaPredicted RBP7.71□□□□□ -1.18
TTC28-208ENST00000612946 SMAD2Q15796 467 aaKnown RBP7.71□□□□□ -1.18
TTC28-208ENST00000612946 TTC9CQ8N5M4 171 aa7.71□□□□□ -1.18
TTC28-208ENST00000612946 OR10D3Q8NH80 312 aa7.71□□□□□ -1.18
TTC28-208ENST00000612946 AICDAQ9GZX7 198 aa7.71□□□□□ -1.18
TTC28-208ENST00000612946 AHDC1Q5TGY3 1603 aaPredicted RBP7.71□□□□□ -1.18
TTC28-208ENST00000612946 IGLV3-16A0A075B6K0 115 aa7.71□□□□□ -1.18
TTC28-208ENST00000612946 EML2O95834 649 aa7.71□□□□□ -1.18
TTC28-208ENST00000612946 CEACAM6P40199 344 aa7.71□□□□□ -1.18
TTC28-208ENST00000612946 WDR31Q8NA23 367 aa7.71□□□□□ -1.18
TTC28-208ENST00000612946 KBTBD11-OT1A0A1B0GTJ5 212 aa7.71□□□□□ -1.18
TTC28-208ENST00000612946 NKX2-2O95096 273 aa7.71□□□□□ -1.18
TTC28-208ENST00000612946 CSN3P07498 182 aa7.71□□□□□ -1.18
TTC28-208ENST00000612946 RGRP47804 291 aa7.71□□□□□ -1.18
TTC28-208ENST00000612946 ARG2P78540 354 aa7.71□□□□□ -1.18
TTC28-208ENST00000612946 MARS2Q96GW9 593 aaKnown RBP7.71□□□□□ -1.18
TTC28-208ENST00000612946 ERRFI1Q9UJM3 462 aaPredicted RBP7.71□□□□□ -1.18
TTC28-208ENST00000612946 A0A1B0GWJ7 208 aa7.71□□□□□ -1.18
TTC28-208ENST00000612946 NKX2-6A6NCS4 301 aa7.71□□□□□ -1.18
TTC28-208ENST00000612946 KLRC4-KLRK1H3BQV0 150 aa7.71□□□□□ -1.18
TTC28-208ENST00000612946 TMEM50AO95807 157 aa7.71□□□□□ -1.18
TTC28-208ENST00000612946 IL2RAP01589 272 aa7.71□□□□□ -1.18
TTC28-208ENST00000612946 LGALS3P17931 250 aaKnown RBP7.71□□□□□ -1.18
TTC28-208ENST00000612946 RAC3P60763 192 aa7.71□□□□□ -1.18
TTC28-208ENST00000612946 MARCH3Q86UD3 253 aa7.71□□□□□ -1.18
TTC28-208ENST00000612946 MMD2Q8IY49 270 aa7.71□□□□□ -1.18
TTC28-208ENST00000612946 TRMT61AQ96FX7 289 aaKnown RBP7.71□□□□□ -1.18
TTC28-208ENST00000612946 GLI4P10075 376 aa7.7□□□□□ -1.18
TTC28-208ENST00000612946 TRBV24-1A0A075B6N3 115 aa7.7□□□□□ -1.18
TTC28-208ENST00000612946 KCNE1BA0A087WTH5 132 aa7.7□□□□□ -1.18
TTC28-208ENST00000612946 GALNSP34059 522 aa7.7□□□□□ -1.18
TTC28-208ENST00000612946 H2BFSP57053 126 aa7.7□□□□□ -1.18
TTC28-208ENST00000612946 OR11H4Q8NGC9 324 aa7.7□□□□□ -1.18
TTC28-208ENST00000612946 LTBP3Q9NS15 1303 aa7.7□□□□□ -1.18
TTC28-208ENST00000612946 RBPJQ06330 500 aa7.7□□□□□ -1.18
TTC28-208ENST00000612946 HEPN1Q6WQI6 88 aa7.7□□□□□ -1.18
TTC28-208ENST00000612946 HIST3H2BBQ8N257 126 aa7.7□□□□□ -1.18
TTC28-208ENST00000612946 TRPM7Q96QT4 1865 aa7.7□□□□□ -1.18
TTC28-208ENST00000612946 HYAL3O43820 417 aaPredicted RBP7.7□□□□□ -1.18
TTC28-208ENST00000612946 S100A7L2Q5SY68 101 aa7.7□□□□□ -1.18
TTC28-208ENST00000612946 FNDC7Q5VTL7 733 aa7.7□□□□□ -1.18
TTC28-208ENST00000612946 CHCHD1Q96BP2 118 aaKnown RBP7.7□□□□□ -1.18
TTC28-208ENST00000612946 TRBV5-5A0A0J9YX44 114 aa7.7□□□□□ -1.18
TTC28-208ENST00000612946 C17orf51A8MQB3 221 aa7.7□□□□□ -1.18
TTC28-208ENST00000612946 CDX4O14627 284 aaPredicted RBP7.7□□□□□ -1.18
TTC28-208ENST00000612946 IGLV3-27P01718 113 aa7.7□□□□□ -1.18
TTC28-208ENST00000612946 OR8I2Q8N0Y5 310 aa7.7□□□□□ -1.18
TTC28-208ENST00000612946 TMEM178AQ8NBL3 297 aa7.7□□□□□ -1.18
TTC28-208ENST00000612946 C16orf52Q8NHV5 167 aa7.7□□□□□ -1.18
TTC28-208ENST00000612946 ZNF519Q8TB69 540 aa7.7□□□□□ -1.18
TTC28-208ENST00000612946 HIST1H2BLQ99880 126 aa7.7□□□□□ -1.18
TTC28-208ENST00000612946 MEGF9Q9H1U4 602 aa7.7□□□□□ -1.18
TTC28-208ENST00000612946 ZNF665Q9H7R5 613 aa7.7□□□□□ -1.18
TTC28-208ENST00000612946 OR3A4PP47883 348 aa7.7□□□□□ -1.18
TTC28-208ENST00000612946 ACSM6Q6P461 480 aa7.7□□□□□ -1.18
TTC28-208ENST00000612946 AMER3Q8N944 861 aa7.7□□□□□ -1.18
TTC28-208ENST00000612946 GPR27Q9NS67 375 aa7.7□□□□□ -1.18
TTC28-208ENST00000612946 H0YL77 283 aa7.7□□□□□ -1.18
TTC28-208ENST00000612946 ISG15P05161 165 aa7.7□□□□□ -1.18
TTC28-208ENST00000612946 RPL11P62913 178 aaKnown RBP7.7□□□□□ -1.18
TTC28-208ENST00000612946 SMAD4Q13485 552 aaKnown RBP7.7□□□□□ -1.18
TTC28-208ENST00000612946 BAHD1Q8TBE0 780 aaPredicted RBP7.7□□□□□ -1.18
TTC28-208ENST00000612946 RNF122Q9H9V4 155 aa7.7□□□□□ -1.18
TTC28-208ENST00000612946 RNPS1Q15287 305 aaKnown RBP7.7□□□□□ -1.18
TTC28-208ENST00000612946 ZNF324BQ6AW86 544 aaPredicted RBP7.7□□□□□ -1.18
TTC28-208ENST00000612946 DGAT2L7PQ6IED9 249 aa7.7□□□□□ -1.18
TTC28-208ENST00000612946 C19orf48Q6RUI8 117 aa7.7□□□□□ -1.18
TTC28-208ENST00000612946 SMPXQ9UHP9 88 aa7.7□□□□□ -1.18
TTC28-208ENST00000612946 NR0B2Q15466 257 aa7.69□□□□□ -1.18
TTC28-208ENST00000612946 DEFB110Q30KQ9 67 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms