RNA–Protein interactions for RNA: ENST00000609081.1

LMBR1-220, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-220ENST00000609081 UBE2UQ5VVX9 321 aa11.98□□□□□ -0.49
LMBR1-220ENST00000609081 FAM71F2Q6NXP2 309 aa11.98□□□□□ -0.49
LMBR1-220ENST00000609081 LYG1Q8N1E2 194 aa11.98□□□□□ -0.49
LMBR1-220ENST00000609081 OR2AK2Q8NG84 335 aa11.98□□□□□ -0.49
LMBR1-220ENST00000609081 OR51D1Q8NGF3 324 aa11.98□□□□□ -0.49
LMBR1-220ENST00000609081 C12orf4Q9NQ89 552 aa11.98□□□□□ -0.49
LMBR1-220ENST00000609081 RAB22AQ9UL26 194 aa11.98□□□□□ -0.49
LMBR1-220ENST00000609081 A0A0A6YYD4 124 aa11.97□□□□□ -0.49
LMBR1-220ENST00000609081 TCRBV4S1A1TA0A5B7 111 aa11.97□□□□□ -0.49
LMBR1-220ENST00000609081 NCBP2LA6PVI3 153 aaKnown RBP11.97□□□□□ -0.49
LMBR1-220ENST00000609081 SERPINE3A8MV23 424 aa11.97□□□□□ -0.49
LMBR1-220ENST00000609081 ITGB1BP1O14713 200 aa11.97□□□□□ -0.49
LMBR1-220ENST00000609081 SOCS1O15524 211 aa11.97□□□□□ -0.49
LMBR1-220ENST00000609081 SLC6A1P30531 599 aa11.97□□□□□ -0.49
LMBR1-220ENST00000609081 PPP1CCP36873 323 aaKnown RBP11.97□□□□□ -0.49
LMBR1-220ENST00000609081 C2orf76Q3KRA6 126 aa11.97□□□□□ -0.49
LMBR1-220ENST00000609081 PDLIM3Q53GG5 364 aaPredicted RBP11.97□□□□□ -0.49
LMBR1-220ENST00000609081 SLC35E3Q7Z769 313 aa11.97□□□□□ -0.49
LMBR1-220ENST00000609081 OR52L2PQ8NGH6 319 aa11.97□□□□□ -0.49
LMBR1-220ENST00000609081 ABCG5Q9H222 651 aa11.97□□□□□ -0.49
LMBR1-220ENST00000609081 KCNK15Q9H427 330 aa11.97□□□□□ -0.49
LMBR1-220ENST00000609081 PIPOXQ9P0Z9 390 aa11.97□□□□□ -0.49
LMBR1-220ENST00000609081 IGHV3-72A0A0B4J1Y9 119 aa11.96□□□□□ -0.49
LMBR1-220ENST00000609081 IFITM5A6NNB3 132 aa11.96□□□□□ -0.49
LMBR1-220ENST00000609081 FOXI3A8MTJ6 420 aaPredicted RBP11.96□□□□□ -0.49
LMBR1-220ENST00000609081 AP4M1O00189 453 aa11.96□□□□□ -0.49
LMBR1-220ENST00000609081 LDLRAD4O15165 306 aa11.96□□□□□ -0.49
LMBR1-220ENST00000609081 RAB3BP20337 219 aa11.96□□□□□ -0.49
LMBR1-220ENST00000609081 RAB6AP20340 208 aa11.96□□□□□ -0.49
LMBR1-220ENST00000609081 GADD45AP24522 165 aa11.96□□□□□ -0.49
LMBR1-220ENST00000609081 FGF9P31371 208 aaPredicted RBP11.96□□□□□ -0.49
LMBR1-220ENST00000609081 VEGFCP49767 419 aa11.96□□□□□ -0.49
LMBR1-220ENST00000609081 MRPS15P82914 257 aaKnown RBP11.96□□□□□ -0.49
LMBR1-220ENST00000609081 LSAMPQ13449 338 aa11.96□□□□□ -0.49
LMBR1-220ENST00000609081 GNMTQ14749 295 aa11.96□□□□□ -0.49
LMBR1-220ENST00000609081 FAM53AQ6NSI3 398 aaPredicted RBP11.96□□□□□ -0.49
LMBR1-220ENST00000609081 SPARTQ8N0X7 666 aa11.96□□□□□ -0.49
LMBR1-220ENST00000609081 Q8N9W7 124 aa11.96□□□□□ -0.49
LMBR1-220ENST00000609081 SETD6Q8TBK2 473 aa11.96□□□□□ -0.49
LMBR1-220ENST00000609081 IL1F10Q8WWZ1 152 aa11.96□□□□□ -0.49
LMBR1-220ENST00000609081 EDARADDQ8WWZ3 215 aa11.96□□□□□ -0.49
LMBR1-220ENST00000609081 PTX4Q96A99 478 aa11.96□□□□□ -0.49
LMBR1-220ENST00000609081 RASL11BQ9BPW5 248 aa11.96□□□□□ -0.49
LMBR1-220ENST00000609081 CENPOQ9BU64 300 aa11.96□□□□□ -0.49
LMBR1-220ENST00000609081 ZFP57Q9NU63 452 aa11.96□□□□□ -0.49
LMBR1-220ENST00000609081 AK3Q9UIJ7 227 aa11.96□□□□□ -0.49
LMBR1-220ENST00000609081 SH2D7A6NKC9 451 aaPredicted RBP11.95□□□□□ -0.5
LMBR1-220ENST00000609081 RAB29O14966 203 aa11.95□□□□□ -0.5
LMBR1-220ENST00000609081 RRP9O43818 475 aaKnown RBP11.95□□□□□ -0.5
LMBR1-220ENST00000609081 PF4V1P10720 104 aa11.95□□□□□ -0.5
LMBR1-220ENST00000609081 ZBTB25P24278 435 aa11.95□□□□□ -0.5
LMBR1-220ENST00000609081 TMEM50BP56557 158 aa11.95□□□□□ -0.5
LMBR1-220ENST00000609081 ARL6IP1Q15041 203 aa11.95□□□□□ -0.5
LMBR1-220ENST00000609081 TCTEX1D4Q5JR98 221 aa11.95□□□□□ -0.5
LMBR1-220ENST00000609081 KPRPQ5T749 579 aaPredicted RBP11.95□□□□□ -0.5
LMBR1-220ENST00000609081 ZNF833PQ6ZTB9 187 aa11.95□□□□□ -0.5
LMBR1-220ENST00000609081 ODF3L1Q8IXM7 274 aa11.95□□□□□ -0.5
LMBR1-220ENST00000609081 ARHGAP5-AS1Q96IT6 56 aa11.95□□□□□ -0.5
LMBR1-220ENST00000609081 S1PR3Q99500 378 aa11.95□□□□□ -0.5
LMBR1-220ENST00000609081 CMSS1Q9BQ75 279 aaKnown RBP11.95□□□□□ -0.5
LMBR1-220ENST00000609081 SLC23A1Q9UHI7 598 aa11.95□□□□□ -0.5
LMBR1-220ENST00000609081 ZNF580Q9UK33 172 aa11.95□□□□□ -0.5
LMBR1-220ENST00000609081 TMEM272A0A1B0GTI8 110 aa11.94□□□□□ -0.5
LMBR1-220ENST00000609081 METTL21EPA6NDL7 271 aa11.94□□□□□ -0.5
LMBR1-220ENST00000609081 DIRAS3O95661 229 aa11.94□□□□□ -0.5
LMBR1-220ENST00000609081 PSMB9P28065 219 aa11.94□□□□□ -0.5
LMBR1-220ENST00000609081 GPR12P47775 334 aa11.94□□□□□ -0.5
LMBR1-220ENST00000609081 SERPINB10P48595 397 aa11.94□□□□□ -0.5
LMBR1-220ENST00000609081 CLDN12P56749 244 aa11.94□□□□□ -0.5
LMBR1-220ENST00000609081 HLA-DRB3P79483 266 aa11.94□□□□□ -0.5
LMBR1-220ENST00000609081 HES5Q5TA89 166 aa11.94□□□□□ -0.5
LMBR1-220ENST00000609081 SAMD5Q5TGI4 173 aa11.94□□□□□ -0.5
LMBR1-220ENST00000609081 TPRA1Q86W33 373 aa11.94□□□□□ -0.5
LMBR1-220ENST00000609081 STPG2Q8N412 459 aa11.94□□□□□ -0.5
LMBR1-220ENST00000609081 FAM71E2Q8N5Q1 922 aa11.94□□□□□ -0.5
LMBR1-220ENST00000609081 WFDC9Q8NEX5 89 aa11.94□□□□□ -0.5
LMBR1-220ENST00000609081 RAB3CQ96E17 227 aa11.94□□□□□ -0.5
LMBR1-220ENST00000609081 CHCHD6Q9BRQ6 235 aa11.94□□□□□ -0.5
LMBR1-220ENST00000609081 PECRQ9BY49 303 aa11.94□□□□□ -0.5
LMBR1-220ENST00000609081 IFI27L2Q9H2X8 130 aa11.94□□□□□ -0.5
LMBR1-220ENST00000609081 Q9N2K0 584 aa11.94□□□□□ -0.5
LMBR1-220ENST00000609081 PLSCR3Q9NRY6 295 aa11.94□□□□□ -0.5
LMBR1-220ENST00000609081 STUB1Q9UNE7 303 aa11.94□□□□□ -0.5
LMBR1-220ENST00000609081 SAA2-SAA4A0A096LPE2 208 aa11.93□□□□□ -0.5
LMBR1-220ENST00000609081 HSPA12AO43301 675 aa11.93□□□□□ -0.5
LMBR1-220ENST00000609081 PF4P02776 101 aa11.93□□□□□ -0.5
LMBR1-220ENST00000609081 CD3GP09693 182 aa11.93□□□□□ -0.5
LMBR1-220ENST00000609081 SAA2P0DJI9 122 aaPredicted RBP11.93□□□□□ -0.5
LMBR1-220ENST00000609081 OR5H8P0DN80 308 aa11.93□□□□□ -0.5
LMBR1-220ENST00000609081 MC5RP33032 325 aa11.93□□□□□ -0.5
LMBR1-220ENST00000609081 SOX6P35712 828 aa11.93□□□□□ -0.5
LMBR1-220ENST00000609081 KIR2DS1Q14954 304 aa11.93□□□□□ -0.5
LMBR1-220ENST00000609081 KHDC1LQ5JSQ8 128 aa11.93□□□□□ -0.5
LMBR1-220ENST00000609081 HIST2H2BDQ6DRA6 164 aa11.93□□□□□ -0.5
LMBR1-220ENST00000609081 C22orf42Q6IC83 251 aa11.93□□□□□ -0.5
LMBR1-220ENST00000609081 ZNF773Q6PK81 442 aa11.93□□□□□ -0.5
LMBR1-220ENST00000609081 REC114Q7Z4M0 266 aa11.93□□□□□ -0.5
LMBR1-220ENST00000609081 PHF21AQ96BD5 680 aa11.93□□□□□ -0.5
LMBR1-220ENST00000609081 NABP2Q9BQ15 211 aa11.93□□□□□ -0.5
LMBR1-220ENST00000609081 SSR3Q9UNL2 185 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms