RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 CHIAQ9BZP6 476 aa11.2□□□□□ -0.62
RNF40-212ENST00000602784 TOLLIPQ9H0E2 274 aa11.2□□□□□ -0.62
RNF40-212ENST00000602784 GHITMQ9H3K2 345 aa11.2□□□□□ -0.62
RNF40-212ENST00000602784 VPREB3Q9UKI3 123 aa11.2□□□□□ -0.62
RNF40-212ENST00000602784 IGKV1-6A0A0C4DH72 117 aa11.19□□□□□ -0.62
RNF40-212ENST00000602784 A0A1W2PPE3 182 aa11.19□□□□□ -0.62
RNF40-212ENST00000602784 H3BUX3 64 aa11.19□□□□□ -0.62
RNF40-212ENST00000602784 HSPA12AO43301 675 aa11.19□□□□□ -0.62
RNF40-212ENST00000602784 HLA-DQB1P01920 261 aa11.19□□□□□ -0.62
RNF40-212ENST00000602784 CTXN2P0C2S0 81 aa11.19□□□□□ -0.62
RNF40-212ENST00000602784 GSTT2P0CG29 244 aa11.19□□□□□ -0.62
RNF40-212ENST00000602784 GSTT2BP0CG30 244 aa11.19□□□□□ -0.62
RNF40-212ENST00000602784 BRS3P32247 399 aa11.19□□□□□ -0.62
RNF40-212ENST00000602784 RAB7AP51149 207 aa11.19□□□□□ -0.62
RNF40-212ENST00000602784 TAS2R20P59543 309 aa11.19□□□□□ -0.62
RNF40-212ENST00000602784 ZNF816Q0VGE8 651 aaPredicted RBP11.19□□□□□ -0.62
RNF40-212ENST00000602784 HERPUD1Q15011 391 aa11.19□□□□□ -0.62
RNF40-212ENST00000602784 LIAT1Q6ZQX7 453 aa11.19□□□□□ -0.62
RNF40-212ENST00000602784 IZUMO1Q8IYV9 350 aa11.19□□□□□ -0.62
RNF40-212ENST00000602784 OR8H3Q8N146 312 aa11.19□□□□□ -0.62
RNF40-212ENST00000602784 OR2AK2Q8NG84 335 aa11.19□□□□□ -0.62
RNF40-212ENST00000602784 EDARADDQ8WWZ3 215 aa11.19□□□□□ -0.62
RNF40-212ENST00000602784 TOMM40LQ969M1 308 aa11.19□□□□□ -0.62
RNF40-212ENST00000602784 RPEQ96AT9 228 aa11.19□□□□□ -0.62
RNF40-212ENST00000602784 DGCR14Q96DF8 476 aaKnown RBP11.19□□□□□ -0.62
RNF40-212ENST00000602784 DUX5Q96PT3 197 aa11.19□□□□□ -0.62
RNF40-212ENST00000602784 ABHD14AQ9BUJ0 271 aa11.19□□□□□ -0.62
RNF40-212ENST00000602784 ST6GALNAC5Q9BVH7 336 aa11.19□□□□□ -0.62
RNF40-212ENST00000602784 SLIRPQ9GZT3 109 aaKnown RBP11.19□□□□□ -0.62
RNF40-212ENST00000602784 ABCB10Q9NRK6 738 aa11.19□□□□□ -0.62
RNF40-212ENST00000602784 SLC23A1Q9UHI7 598 aa11.19□□□□□ -0.62
RNF40-212ENST00000602784 TRBV6-7A0A0A0MS04 114 aa11.18□□□□□ -0.62
RNF40-212ENST00000602784 SLC31A2O15432 143 aa11.18□□□□□ -0.62
RNF40-212ENST00000602784 GAPDHP04406 335 aaKnown RBP11.18□□□□□ -0.62
RNF40-212ENST00000602784 PAX6P26367 422 aa11.18□□□□□ -0.62
RNF40-212ENST00000602784 PRSS3P35030 304 aa11.18□□□□□ -0.62
RNF40-212ENST00000602784 CEACAM6P40199 344 aa11.18□□□□□ -0.62
RNF40-212ENST00000602784 SRSF2Q01130 221 aaKnown RBP11.18□□□□□ -0.62
RNF40-212ENST00000602784 KRTAP24-1Q3LI83 254 aa11.18□□□□□ -0.62
RNF40-212ENST00000602784 HOGA1Q86XE5 327 aa11.18□□□□□ -0.62
RNF40-212ENST00000602784 OR10J5Q8NHC4 309 aa11.18□□□□□ -0.62
RNF40-212ENST00000602784 C15orf40Q8WUR7 153 aa11.18□□□□□ -0.62
RNF40-212ENST00000602784 AGMATQ9BSE5 352 aa11.18□□□□□ -0.62
RNF40-212ENST00000602784 NXF2Q9GZY0 626 aaKnown RBP11.18□□□□□ -0.62
RNF40-212ENST00000602784 SCPEP1Q9HB40 452 aa11.18□□□□□ -0.62
RNF40-212ENST00000602784 OR1A1Q9P1Q5 309 aa11.18□□□□□ -0.62
RNF40-212ENST00000602784 ANXA10Q9UJ72 324 aa11.18□□□□□ -0.62
RNF40-212ENST00000602784 ADAM30Q9UKF2 790 aa11.18□□□□□ -0.62
RNF40-212ENST00000602784 IGKV1D-8A0A087WSZ0 117 aa11.17□□□□□ -0.62
RNF40-212ENST00000602784 FAM25AB3EWG3 89 aa11.17□□□□□ -0.62
RNF40-212ENST00000602784 FAM25CB3EWG5 89 aa11.17□□□□□ -0.62
RNF40-212ENST00000602784 FAM25GB3EWG6 89 aa11.17□□□□□ -0.62
RNF40-212ENST00000602784 CTDSP2O14595 271 aa11.17□□□□□ -0.62
RNF40-212ENST00000602784 RGS5O15539 181 aa11.17□□□□□ -0.62
RNF40-212ENST00000602784 TXNL1O43396 289 aa11.17□□□□□ -0.62
RNF40-212ENST00000602784 LANCL1O43813 399 aa11.17□□□□□ -0.62
RNF40-212ENST00000602784 LPLP06858 475 aa11.17□□□□□ -0.62
RNF40-212ENST00000602784 HABP2Q14520 560 aaPredicted RBP11.17□□□□□ -0.62
RNF40-212ENST00000602784 IGSF11Q5DX21 431 aa11.17□□□□□ -0.62
RNF40-212ENST00000602784 CNIH2Q6PI25 160 aa11.17□□□□□ -0.62
RNF40-212ENST00000602784 THNSL2Q86YJ6 484 aa11.17□□□□□ -0.62
RNF40-212ENST00000602784 MAFIPQ8WZ33 124 aa11.17□□□□□ -0.62
RNF40-212ENST00000602784 MIXL1Q9H2W2 232 aa11.17□□□□□ -0.62
RNF40-212ENST00000602784 IFI27L2Q9H2X8 130 aa11.17□□□□□ -0.62
RNF40-212ENST00000602784 RAB18Q9NP72 206 aa11.17□□□□□ -0.62
RNF40-212ENST00000602784 PITPNC1Q9UKF7 332 aa11.17□□□□□ -0.62
RNF40-212ENST00000602784 A3GALT2U3KPV4 340 aa11.17□□□□□ -0.62
RNF40-212ENST00000602784 A0A1W2PPI3 338 aa11.16□□□□□ -0.62
RNF40-212ENST00000602784 DPPA5A6NC42 116 aa11.16□□□□□ -0.62
RNF40-212ENST00000602784 FAM181BA6NEQ2 426 aa11.16□□□□□ -0.62
RNF40-212ENST00000602784 FAM90A9PA6NNJ1 464 aa11.16□□□□□ -0.62
RNF40-212ENST00000602784 RNF212BA8MTL3 300 aa11.16□□□□□ -0.62
RNF40-212ENST00000602784 SULT1C2O00338 296 aa11.16□□□□□ -0.62
RNF40-212ENST00000602784 HSD17B6O14756 317 aa11.16□□□□□ -0.62
RNF40-212ENST00000602784 BET1O15155 118 aa11.16□□□□□ -0.62
RNF40-212ENST00000602784 GPR137BO60478 399 aa11.16□□□□□ -0.62
RNF40-212ENST00000602784 PTHLHP12272 177 aa11.16□□□□□ -0.62
RNF40-212ENST00000602784 RAB13P51153 203 aa11.16□□□□□ -0.62
RNF40-212ENST00000602784 DIAPH2-AS1Q14236 149 aa11.16□□□□□ -0.62
RNF40-212ENST00000602784 PLA1AQ53H76 456 aa11.16□□□□□ -0.62
RNF40-212ENST00000602784 FAM71F2Q6NXP2 309 aa11.16□□□□□ -0.62
RNF40-212ENST00000602784 LAX1Q8IWV1 398 aa11.16□□□□□ -0.62
RNF40-212ENST00000602784 ODF3L1Q8IXM7 274 aa11.16□□□□□ -0.62
RNF40-212ENST00000602784 LYG1Q8N1E2 194 aa11.16□□□□□ -0.62
RNF40-212ENST00000602784 DTX3Q8N9I9 347 aa11.16□□□□□ -0.62
RNF40-212ENST00000602784 BEST4Q8NFU0 473 aa11.16□□□□□ -0.62
RNF40-212ENST00000602784 MCFD2Q8NI22 146 aa11.16□□□□□ -0.62
RNF40-212ENST00000602784 RTN4IP1Q8WWV3 396 aaPredicted RBP11.16□□□□□ -0.62
RNF40-212ENST00000602784 C11orf54Q9H0W9 315 aaPredicted RBP11.16□□□□□ -0.62
RNF40-212ENST00000602784 TNFRSF19Q9NS68 423 aa11.16□□□□□ -0.62
RNF40-212ENST00000602784 RDH8Q9NYR8 311 aa11.16□□□□□ -0.62
RNF40-212ENST00000602784 PIPOXQ9P0Z9 390 aa11.16□□□□□ -0.62
RNF40-212ENST00000602784 RABL2AQ9UBK7 228 aaPredicted RBP11.16□□□□□ -0.62
RNF40-212ENST00000602784 EXTL2Q9UBQ6 330 aa11.16□□□□□ -0.62
RNF40-212ENST00000602784 ANAPC10Q9UM13 185 aa11.16□□□□□ -0.62
RNF40-212ENST00000602784 RABL2BQ9UNT1 228 aa11.16□□□□□ -0.62
RNF40-212ENST00000602784 TCF19Q9Y242 345 aa11.16□□□□□ -0.62
RNF40-212ENST00000602784 MRPS7Q9Y2R9 242 aaKnown RBP11.16□□□□□ -0.62
RNF40-212ENST00000602784 IGHV1-3A0A0C4DH29 117 aa11.15□□□□□ -0.62
RNF40-212ENST00000602784 A6NDX4 124 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms