RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 EAF1Q96JC9 268 aaPredicted RBP13.66□□□□□ -0.22
HERC3-214ENST00000601319 RAB22AQ9UL26 194 aa13.66□□□□□ -0.22
HERC3-214ENST00000601319 PLXNB1O43157 2135 aa13.65□□□□□ -0.22
HERC3-214ENST00000601319 RAB6AP20340 208 aa13.65□□□□□ -0.22
HERC3-214ENST00000601319 OR8H1Q8NGG4 311 aa13.65□□□□□ -0.22
HERC3-214ENST00000601319 PTX4Q96A99 478 aa13.65□□□□□ -0.22
HERC3-214ENST00000601319 ARHGAP5-AS1Q96IT6 56 aa13.65□□□□□ -0.22
HERC3-214ENST00000601319 PECRQ9BY49 303 aa13.65□□□□□ -0.22
HERC3-214ENST00000601319 TXNL4BQ9NX01 149 aaKnown RBP13.65□□□□□ -0.22
HERC3-214ENST00000601319 ADARB2-AS1A8MUL3 147 aa13.64□□□□□ -0.23
HERC3-214ENST00000601319 HLA-DRB3P79483 266 aa13.64□□□□□ -0.23
HERC3-214ENST00000601319 LSAMPQ13449 338 aa13.64□□□□□ -0.23
HERC3-214ENST00000601319 PLAC9Q5JTB6 97 aa13.64□□□□□ -0.23
HERC3-214ENST00000601319 FAM71F2Q6NXP2 309 aa13.64□□□□□ -0.23
HERC3-214ENST00000601319 C5orf24Q7Z6I8 188 aa13.64□□□□□ -0.23
HERC3-214ENST00000601319 TPRA1Q86W33 373 aa13.64□□□□□ -0.23
HERC3-214ENST00000601319 NR2C2APQ86WQ0 139 aa13.64□□□□□ -0.23
HERC3-214ENST00000601319 ODF3L1Q8IXM7 274 aa13.64□□□□□ -0.23
HERC3-214ENST00000601319 LYG1Q8N1E2 194 aa13.64□□□□□ -0.23
HERC3-214ENST00000601319 OR2AK2Q8NG84 335 aa13.64□□□□□ -0.23
HERC3-214ENST00000601319 OR5AU1Q8NGC0 362 aa13.64□□□□□ -0.23
HERC3-214ENST00000601319 CITED2Q99967 270 aaPredicted RBP13.64□□□□□ -0.23
HERC3-214ENST00000601319 HDHD3Q9BSH5 251 aaPredicted RBP13.64□□□□□ -0.23
HERC3-214ENST00000601319 IGHV3-72A0A0B4J1Y9 119 aa13.63□□□□□ -0.23
HERC3-214ENST00000601319 SH2D7A6NKC9 451 aaPredicted RBP13.63□□□□□ -0.23
HERC3-214ENST00000601319 ITGB1BP1O14713 200 aa13.63□□□□□ -0.23
HERC3-214ENST00000601319 MOSP00540 346 aa13.63□□□□□ -0.23
HERC3-214ENST00000601319 OPN1MWP04001 364 aa13.63□□□□□ -0.23
HERC3-214ENST00000601319 OPN1MW2P0DN77 364 aa13.63□□□□□ -0.23
HERC3-214ENST00000601319 OPN1MW3P0DN78 364 aa13.63□□□□□ -0.23
HERC3-214ENST00000601319 CD83Q01151 205 aa13.63□□□□□ -0.23
HERC3-214ENST00000601319 PLA2G7Q13093 441 aa13.63□□□□□ -0.23
HERC3-214ENST00000601319 HNF4GQ14541 408 aa13.63□□□□□ -0.23
HERC3-214ENST00000601319 ZNF833PQ6ZTB9 187 aa13.63□□□□□ -0.23
HERC3-214ENST00000601319 SETD6Q8TBK2 473 aa13.63□□□□□ -0.23
HERC3-214ENST00000601319 IL1F10Q8WWZ1 152 aa13.63□□□□□ -0.23
HERC3-214ENST00000601319 RAB3CQ96E17 227 aa13.63□□□□□ -0.23
HERC3-214ENST00000601319 CMSS1Q9BQ75 279 aaKnown RBP13.63□□□□□ -0.23
HERC3-214ENST00000601319 IFI27L2Q9H2X8 130 aa13.63□□□□□ -0.23
HERC3-214ENST00000601319 Q9N2K0 584 aa13.63□□□□□ -0.23
HERC3-214ENST00000601319 LIN7CQ9NUP9 197 aaKnown RBP13.63□□□□□ -0.23
HERC3-214ENST00000601319 SSR3Q9UNL2 185 aa13.63□□□□□ -0.23
HERC3-214ENST00000601319 NOTOA8MTQ0 251 aa13.62□□□□□ -0.23
HERC3-214ENST00000601319 IGHG2P01859 326 aa13.62□□□□□ -0.23
HERC3-214ENST00000601319 GADD45AP24522 165 aa13.62□□□□□ -0.23
HERC3-214ENST00000601319 C9orf152Q5JTZ5 239 aa13.62□□□□□ -0.23
HERC3-214ENST00000601319 CENPVQ7Z7K6 275 aaPredicted RBP13.62□□□□□ -0.23
HERC3-214ENST00000601319 OR4X2Q8NGF9 303 aa13.62□□□□□ -0.23
HERC3-214ENST00000601319 FAM110DQ8TAY7 271 aaPredicted RBP13.62□□□□□ -0.23
HERC3-214ENST00000601319 GHITMQ9H3K2 345 aa13.62□□□□□ -0.23
HERC3-214ENST00000601319 SLC23A1Q9UHI7 598 aa13.62□□□□□ -0.23
HERC3-214ENST00000601319 KCNK7Q9Y2U2 307 aa13.62□□□□□ -0.23
HERC3-214ENST00000601319 SAA2-SAA4A0A096LPE2 208 aa13.61□□□□□ -0.23
HERC3-214ENST00000601319 ZNF736B4DX44 427 aaPredicted RBP13.61□□□□□ -0.23
HERC3-214ENST00000601319 RAB27BO00194 218 aa13.61□□□□□ -0.23
HERC3-214ENST00000601319 MFNGO00587 321 aa13.61□□□□□ -0.23
HERC3-214ENST00000601319 SAA2P0DJI9 122 aaPredicted RBP13.61□□□□□ -0.23
HERC3-214ENST00000601319 ZBTB25P24278 435 aa13.61□□□□□ -0.23
HERC3-214ENST00000601319 TCTEX1D4Q5JR98 221 aa13.61□□□□□ -0.23
HERC3-214ENST00000601319 HIST2H2BDQ6DRA6 164 aa13.61□□□□□ -0.23
HERC3-214ENST00000601319 FAM71E2Q8N5Q1 922 aa13.61□□□□□ -0.23
HERC3-214ENST00000601319 Q8N9W7 124 aa13.61□□□□□ -0.23
HERC3-214ENST00000601319 OR4F17Q8NGA8 305 aa13.61□□□□□ -0.23
HERC3-214ENST00000601319 OR10R2Q8NGX6 335 aa13.61□□□□□ -0.23
HERC3-214ENST00000601319 CHPT1Q8WUD6 406 aa13.61□□□□□ -0.23
HERC3-214ENST00000601319 EDARADDQ8WWZ3 215 aa13.61□□□□□ -0.23
HERC3-214ENST00000601319 OR4F4Q96R69 305 aa13.61□□□□□ -0.23
HERC3-214ENST00000601319 PLSCR3Q9NRY6 295 aa13.61□□□□□ -0.23
HERC3-214ENST00000601319 PIPOXQ9P0Z9 390 aa13.61□□□□□ -0.23
HERC3-214ENST00000601319 METTL21EPA6NDL7 271 aa13.6□□□□□ -0.23
HERC3-214ENST00000601319 SERPINE3A8MV23 424 aa13.6□□□□□ -0.23
HERC3-214ENST00000601319 DIRAS3O95661 229 aa13.6□□□□□ -0.23
HERC3-214ENST00000601319 HIST1H1DP16402 221 aaKnown RBP13.6□□□□□ -0.23
HERC3-214ENST00000601319 NSUN5P1Q3KNT7 163 aa13.6□□□□□ -0.23
HERC3-214ENST00000601319 MOGAT2Q3SYC2 334 aa13.6□□□□□ -0.23
HERC3-214ENST00000601319 SLC35E3Q7Z769 313 aa13.6□□□□□ -0.23
HERC3-214ENST00000601319 FOXRED2Q8IWF2 684 aa13.6□□□□□ -0.23
HERC3-214ENST00000601319 KCTD7Q96MP8 289 aa13.6□□□□□ -0.23
HERC3-214ENST00000601319 S1PR3Q99500 378 aa13.6□□□□□ -0.23
HERC3-214ENST00000601319 NABP2Q9BQ15 211 aa13.6□□□□□ -0.23
HERC3-214ENST00000601319 MRPL20Q9BYC9 149 aaKnown RBP13.6□□□□□ -0.23
HERC3-214ENST00000601319 ABCG5Q9H222 651 aa13.6□□□□□ -0.23
HERC3-214ENST00000601319 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.6□□□□□ -0.23
HERC3-214ENST00000601319 A0A0B4J203 849 aa13.59□□□□□ -0.23
HERC3-214ENST00000601319 PSMB11A5LHX3 300 aa13.59□□□□□ -0.23
HERC3-214ENST00000601319 NCBP2LA6PVI3 153 aaKnown RBP13.59□□□□□ -0.23
HERC3-214ENST00000601319 TRDCB7Z8K6 153 aa13.59□□□□□ -0.23
HERC3-214ENST00000601319 RAB29O14966 203 aa13.59□□□□□ -0.23
HERC3-214ENST00000601319 KCNAB3O43448 404 aa13.59□□□□□ -0.23
HERC3-214ENST00000601319 CD3GP09693 182 aa13.59□□□□□ -0.23
HERC3-214ENST00000601319 SLC2A2P11168 524 aaPredicted RBP13.59□□□□□ -0.23
HERC3-214ENST00000601319 GPR12P47775 334 aa13.59□□□□□ -0.23
HERC3-214ENST00000601319 OR3A3P47888 321 aa13.59□□□□□ -0.23
HERC3-214ENST00000601319 MRPS15P82914 257 aaKnown RBP13.59□□□□□ -0.23
HERC3-214ENST00000601319 ARL6IP1Q15041 203 aa13.59□□□□□ -0.23
HERC3-214ENST00000601319 NEDD8Q15843 81 aa13.59□□□□□ -0.23
HERC3-214ENST00000601319 OR4A4PQ8NGN8 299 aa13.59□□□□□ -0.23
HERC3-214ENST00000601319 ZNF251Q9BRH9 671 aa13.59□□□□□ -0.23
HERC3-214ENST00000601319 AGMATQ9BSE5 352 aa13.59□□□□□ -0.23
HERC3-214ENST00000601319 OR51E2Q9H255 320 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms