RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, human

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-208	ENST00000594387	AK3	Q9UIJ7	227 aa		13.81	□□□□□ -0.2
IRF3-208	ENST00000594387	SSR3	Q9UNL2	185 aa		13.81	□□□□□ -0.2
IRF3-208	ENST00000594387	RRP15	Q9Y3B9	282 aa	Known RBP	13.81	□□□□□ -0.2
IRF3-208	ENST00000594387	PSMB11	A5LHX3	300 aa		13.8	□□□□□ -0.2
IRF3-208	ENST00000594387	IFITM5	A6NNB3	132 aa		13.8	□□□□□ -0.2
IRF3-208	ENST00000594387	LANCL1	O43813	399 aa		13.8	□□□□□ -0.2
IRF3-208	ENST00000594387	NAPSA	O96009	420 aa		13.8	□□□□□ -0.2
IRF3-208	ENST00000594387	AMY1A	P04745	511 aa		13.8	□□□□□ -0.2
IRF3-208	ENST00000594387	AMY2A	P04746	511 aa		13.8	□□□□□ -0.2
IRF3-208	ENST00000594387	CD3G	P09693	182 aa		13.8	□□□□□ -0.2
IRF3-208	ENST00000594387	ZNF137P	P52743	207 aa		13.8	□□□□□ -0.2
IRF3-208	ENST00000594387	DEFA6	Q01524	100 aa		13.8	□□□□□ -0.2
IRF3-208	ENST00000594387	KHDC1L	Q5JSQ8	128 aa		13.8	□□□□□ -0.2
IRF3-208	ENST00000594387	FAM53A	Q6NSI3	398 aa	Predicted RBP	13.8	□□□□□ -0.2
IRF3-208	ENST00000594387	CD200R1L	Q6Q8B3	271 aa		13.8	□□□□□ -0.2
IRF3-208	ENST00000594387	S1PR3	Q99500	378 aa		13.8	□□□□□ -0.2
IRF3-208	ENST00000594387	GON7	Q9BXV9	100 aa		13.8	□□□□□ -0.2
IRF3-208	ENST00000594387	PECR	Q9BY49	303 aa		13.8	□□□□□ -0.2
IRF3-208	ENST00000594387	C12orf4	Q9NQ89	552 aa		13.8	□□□□□ -0.2
IRF3-208	ENST00000594387	STUB1	Q9UNE7	303 aa		13.8	□□□□□ -0.2
IRF3-208	ENST00000594387	TSSC4	Q9Y5U2	329 aa	Predicted RBP	13.8	□□□□□ -0.2
IRF3-208	ENST00000594387		A0A0A6YYD4	124 aa		13.79	□□□□□ -0.2
IRF3-208	ENST00000594387	TRBV6-6	A0A0A6YYG2	114 aa		13.79	□□□□□ -0.2
IRF3-208	ENST00000594387	TMEM272	A0A1B0GTI8	110 aa		13.79	□□□□□ -0.2
IRF3-208	ENST00000594387	PF4V1	P10720	104 aa		13.79	□□□□□ -0.2
IRF3-208	ENST00000594387	ZBTB25	P24278	435 aa		13.79	□□□□□ -0.2
IRF3-208	ENST00000594387	GNMT	Q14749	295 aa		13.79	□□□□□ -0.2
IRF3-208	ENST00000594387	HIST2H2BD	Q6DRA6	164 aa		13.79	□□□□□ -0.2
IRF3-208	ENST00000594387	ZNF773	Q6PK81	442 aa		13.79	□□□□□ -0.2
IRF3-208	ENST00000594387	EDARADD	Q8WWZ3	215 aa		13.79	□□□□□ -0.2
IRF3-208	ENST00000594387	RAB3C	Q96E17	227 aa		13.79	□□□□□ -0.2
IRF3-208	ENST00000594387	ARHGAP5-AS1	Q96IT6	56 aa		13.79	□□□□□ -0.2
IRF3-208	ENST00000594387	GHITM	Q9H3K2	345 aa		13.79	□□□□□ -0.2
IRF3-208	ENST00000594387	LIN7C	Q9NUP9	197 aa	Known RBP	13.79	□□□□□ -0.2
IRF3-208	ENST00000594387	PIPOX	Q9P0Z9	390 aa		13.79	□□□□□ -0.2
IRF3-208	ENST00000594387	MGAM2	Q2M2H8	2515 aa		13.79	□□□□□ -0.2
IRF3-208	ENST00000594387		A0A1W2PRX2	142 aa		13.78	□□□□□ -0.2
IRF3-208	ENST00000594387	KCNAB3	O43448	404 aa		13.78	□□□□□ -0.2
IRF3-208	ENST00000594387	FGF9	P31371	208 aa	Predicted RBP	13.78	□□□□□ -0.2
IRF3-208	ENST00000594387	CD83	Q01151	205 aa		13.78	□□□□□ -0.2
IRF3-208	ENST00000594387	FBLN7	Q53RD9	439 aa		13.78	□□□□□ -0.2
IRF3-208	ENST00000594387	ZNF880	Q6PDB4	577 aa		13.78	□□□□□ -0.2
IRF3-208	ENST00000594387	TPRA1	Q86W33	373 aa		13.78	□□□□□ -0.2
IRF3-208	ENST00000594387	WIPF2	Q8TF74	440 aa	Predicted RBP	13.78	□□□□□ -0.2
IRF3-208	ENST00000594387	SLC23A1	Q9UHI7	598 aa		13.78	□□□□□ -0.2
IRF3-208	ENST00000594387	RAB29	O14966	203 aa		13.77	□□□□□ -0.21
IRF3-208	ENST00000594387	RAB6A	P20340	208 aa		13.77	□□□□□ -0.21
IRF3-208	ENST00000594387	CEACAM6	P40199	344 aa		13.77	□□□□□ -0.21
IRF3-208	ENST00000594387	TMEM50B	P56557	158 aa		13.77	□□□□□ -0.21
IRF3-208	ENST00000594387	OR10A3	P58181	314 aa		13.77	□□□□□ -0.21
IRF3-208	ENST00000594387	HLA-DRB3	P79483	266 aa		13.77	□□□□□ -0.21
IRF3-208	ENST00000594387	ARL6IP1	Q15041	203 aa		13.77	□□□□□ -0.21
IRF3-208	ENST00000594387	OR10R2	Q8NGX6	335 aa		13.77	□□□□□ -0.21
IRF3-208	ENST00000594387	CENPO	Q9BU64	300 aa		13.77	□□□□□ -0.21
IRF3-208	ENST00000594387		Q9N2K0	584 aa		13.77	□□□□□ -0.21
IRF3-208	ENST00000594387	TXNL4B	Q9NX01	149 aa	Known RBP	13.77	□□□□□ -0.21
IRF3-208	ENST00000594387		A0A075B6Q4	140 aa		13.76	□□□□□ -0.21
IRF3-208	ENST00000594387	AP4M1	O00189	453 aa		13.76	□□□□□ -0.21
IRF3-208	ENST00000594387	LDLRAD4	O15165	306 aa		13.76	□□□□□ -0.21
IRF3-208	ENST00000594387	RRP9	O43818	475 aa	Known RBP	13.76	□□□□□ -0.21
IRF3-208	ENST00000594387	IGHG2	P01859	326 aa		13.76	□□□□□ -0.21
IRF3-208	ENST00000594387	PF4	P02776	101 aa		13.76	□□□□□ -0.21
IRF3-208	ENST00000594387	TALDO1	P37837	337 aa		13.76	□□□□□ -0.21
IRF3-208	ENST00000594387	LSAMP	Q13449	338 aa		13.76	□□□□□ -0.21
IRF3-208	ENST00000594387	ARFRP1	Q13795	201 aa		13.76	□□□□□ -0.21
IRF3-208	ENST00000594387	FAM71F2	Q6NXP2	309 aa		13.76	□□□□□ -0.21
IRF3-208	ENST00000594387	C5orf24	Q7Z6I8	188 aa		13.76	□□□□□ -0.21
IRF3-208	ENST00000594387	COMMD1	Q8N668	190 aa		13.76	□□□□□ -0.21
IRF3-208	ENST00000594387		Q8N6K4	173 aa		13.76	□□□□□ -0.21
IRF3-208	ENST00000594387	PTX4	Q96A99	478 aa		13.76	□□□□□ -0.21
IRF3-208	ENST00000594387	PHF21A	Q96BD5	680 aa		13.76	□□□□□ -0.21
IRF3-208	ENST00000594387	ZNF251	Q9BRH9	671 aa		13.76	□□□□□ -0.21
IRF3-208	ENST00000594387	HDHD3	Q9BSH5	251 aa	Predicted RBP	13.76	□□□□□ -0.21
IRF3-208	ENST00000594387	ATG5	Q9H1Y0	275 aa		13.76	□□□□□ -0.21
IRF3-208	ENST00000594387	ABCG5	Q9H222	651 aa		13.76	□□□□□ -0.21
IRF3-208	ENST00000594387	VCX3A	Q9NNX9	186 aa		13.76	□□□□□ -0.21
IRF3-208	ENST00000594387	SAA2-SAA4	A0A096LPE2	208 aa		13.75	□□□□□ -0.21
IRF3-208	ENST00000594387	NOTO	A8MTQ0	251 aa		13.75	□□□□□ -0.21
IRF3-208	ENST00000594387	ZNF736	B4DX44	427 aa	Predicted RBP	13.75	□□□□□ -0.21
IRF3-208	ENST00000594387	TRDC	B7Z8K6	153 aa		13.75	□□□□□ -0.21
IRF3-208	ENST00000594387	ITGB1BP1	O14713	200 aa		13.75	□□□□□ -0.21
IRF3-208	ENST00000594387	SAA2	P0DJI9	122 aa	Predicted RBP	13.75	□□□□□ -0.21
IRF3-208	ENST00000594387	SOX6	P35712	828 aa		13.75	□□□□□ -0.21
IRF3-208	ENST00000594387	SERPINB10	P48595	397 aa		13.75	□□□□□ -0.21
IRF3-208	ENST00000594387	KIR2DS1	Q14954	304 aa		13.75	□□□□□ -0.21
IRF3-208	ENST00000594387	MMD	Q15546	238 aa		13.75	□□□□□ -0.21
IRF3-208	ENST00000594387		Q8N9W7	124 aa		13.75	□□□□□ -0.21
IRF3-208	ENST00000594387	CYYR1	Q96J86	154 aa		13.75	□□□□□ -0.21
IRF3-208	ENST00000594387	KCTD7	Q96MP8	289 aa		13.75	□□□□□ -0.21
IRF3-208	ENST00000594387	KIAA1456	Q9P272	454 aa		13.75	□□□□□ -0.21
IRF3-208	ENST00000594387	ZNF221	Q9UK13	617 aa		13.75	□□□□□ -0.21
IRF3-208	ENST00000594387	FOXI3	A8MTJ6	420 aa	Predicted RBP	13.74	□□□□□ -0.21
IRF3-208	ENST00000594387	ST8SIA5	O15466	376 aa		13.74	□□□□□ -0.21
IRF3-208	ENST00000594387	CD33	P20138	364 aa		13.74	□□□□□ -0.21
IRF3-208	ENST00000594387	MC5R	P33032	325 aa		13.74	□□□□□ -0.21
IRF3-208	ENST00000594387	GPR12	P47775	334 aa		13.74	□□□□□ -0.21
IRF3-208	ENST00000594387	OR3A3	P47888	321 aa		13.74	□□□□□ -0.21
IRF3-208	ENST00000594387	NEDD8	Q15843	81 aa		13.74	□□□□□ -0.21
IRF3-208	ENST00000594387	KCTD21	Q4G0X4	260 aa		13.74	□□□□□ -0.21
IRF3-208	ENST00000594387	PLAC9	Q5JTB6	97 aa		13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms