RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 PDCD6O75340 191 aa18.6■□□□□ 0.57
LSM4-202ENST00000593564 TTC23Q5W5X9 447 aa18.6■□□□□ 0.57
LSM4-202ENST00000593564 SETD9Q8NE22 299 aa18.6■□□□□ 0.57
LSM4-202ENST00000593564 GGHQ92820 318 aa18.6■□□□□ 0.57
LSM4-202ENST00000593564 RITA1Q96K30 269 aa18.6■□□□□ 0.57
LSM4-202ENST00000593564 ZNF251Q9BRH9 671 aa18.6■□□□□ 0.57
LSM4-202ENST00000593564 UQCC2Q9BRT2 126 aa18.6■□□□□ 0.57
LSM4-202ENST00000593564 IGHV7-81A0A0B4J1V7 117 aa18.59■□□□□ 0.57
LSM4-202ENST00000593564 PNMA8CA0A1B0GUJ8 204 aa18.59■□□□□ 0.57
LSM4-202ENST00000593564 NBR2O15453 112 aa18.59■□□□□ 0.57
LSM4-202ENST00000593564 YPEL1O60688 119 aa18.59■□□□□ 0.57
LSM4-202ENST00000593564 CD1AP06126 327 aa18.59■□□□□ 0.57
LSM4-202ENST00000593564 CNTFRP26992 372 aa18.59■□□□□ 0.57
LSM4-202ENST00000593564 CHATP28329 748 aa18.59■□□□□ 0.57
LSM4-202ENST00000593564 ZNF616Q08AN1 781 aa18.59■□□□□ 0.57
LSM4-202ENST00000593564 ST3GAL4Q11206 333 aa18.59■□□□□ 0.57
LSM4-202ENST00000593564 C5orf64Q2M2E5 130 aa18.59■□□□□ 0.57
LSM4-202ENST00000593564 C6orf141Q5SZD1 244 aa18.59■□□□□ 0.57
LSM4-202ENST00000593564 ZNF833PQ6ZTB9 187 aa18.59■□□□□ 0.57
LSM4-202ENST00000593564 CYGBQ8WWM9 190 aa18.59■□□□□ 0.57
LSM4-202ENST00000593564 YPEL2Q96QA6 119 aa18.59■□□□□ 0.57
LSM4-202ENST00000593564 ASCL2Q99929 193 aa18.59■□□□□ 0.57
LSM4-202ENST00000593564 ANKRD60Q9BZ19 345 aa18.59■□□□□ 0.57
LSM4-202ENST00000593564 PARP11Q9NR21 331 aa18.59■□□□□ 0.57
LSM4-202ENST00000593564 GHRLQ9UBU3 117 aa18.59■□□□□ 0.57
LSM4-202ENST00000593564 TRAV41A0A0B4J266 112 aa18.58■□□□□ 0.56
LSM4-202ENST00000593564 RGS11O94810 467 aa18.58■□□□□ 0.56
LSM4-202ENST00000593564 GNB1P62873 340 aa18.58■□□□□ 0.56
LSM4-202ENST00000593564 C5orf24Q7Z6I8 188 aa18.58■□□□□ 0.56
LSM4-202ENST00000593564 NPBQ8NG41 125 aa18.58■□□□□ 0.56
LSM4-202ENST00000593564 THRSPQ92748 146 aa18.58■□□□□ 0.56
LSM4-202ENST00000593564 CST11Q9H112 138 aa18.58■□□□□ 0.56
LSM4-202ENST00000593564 LRRC42Q9Y546 428 aa18.58■□□□□ 0.56
LSM4-202ENST00000593564 SAA2-SAA4A0A096LPE2 208 aa18.57■□□□□ 0.56
LSM4-202ENST00000593564 EFCAB10A6NFE3 127 aa18.57■□□□□ 0.56
LSM4-202ENST00000593564 SAA2P0DJI9 122 aaPredicted RBP18.57■□□□□ 0.56
LSM4-202ENST00000593564 CELP19835 753 aa18.57■□□□□ 0.56
LSM4-202ENST00000593564 RAB9AP51151 201 aa18.57■□□□□ 0.56
LSM4-202ENST00000593564 LIN54Q6MZP7 749 aa18.57■□□□□ 0.56
LSM4-202ENST00000593564 MINDY2Q8NBR6 621 aa18.57■□□□□ 0.56
LSM4-202ENST00000593564 FAM46BQ96A09 425 aa18.57■□□□□ 0.56
LSM4-202ENST00000593564 GALMQ96C23 342 aa18.57■□□□□ 0.56
LSM4-202ENST00000593564 SORL1Q92673 2214 aa18.57■□□□□ 0.56
LSM4-202ENST00000593564 NDUFA3O95167 84 aa18.56■□□□□ 0.56
LSM4-202ENST00000593564 MAPK3P27361 379 aaPredicted RBP18.56■□□□□ 0.56
LSM4-202ENST00000593564 BLVRBP30043 206 aaPredicted RBP18.56■□□□□ 0.56
LSM4-202ENST00000593564 OR3A3P47888 321 aa18.56■□□□□ 0.56
LSM4-202ENST00000593564 HMGN3Q15651 99 aa18.56■□□□□ 0.56
LSM4-202ENST00000593564 FAM71F2Q6NXP2 309 aa18.56■□□□□ 0.56
LSM4-202ENST00000593564 ZNF429Q86V71 674 aa18.56■□□□□ 0.56
LSM4-202ENST00000593564 OR2AK2Q8NG84 335 aa18.56■□□□□ 0.56
LSM4-202ENST00000593564 OR5B12Q96R08 314 aa18.56■□□□□ 0.56
LSM4-202ENST00000593564 CNOT2Q9NZN8 540 aaKnown RBP18.56■□□□□ 0.56
LSM4-202ENST00000593564 SMAD5-AS1Q9Y6J3 95 aa18.56■□□□□ 0.56
LSM4-202ENST00000593564 C3orf84H3BNL1 204 aa18.55■□□□□ 0.56
LSM4-202ENST00000593564 LY86O95711 162 aa18.55■□□□□ 0.56
LSM4-202ENST00000593564 LRRC36Q1X8D7 754 aa18.55■□□□□ 0.56
LSM4-202ENST00000593564 SULT4A1Q9BR01 284 aa18.55■□□□□ 0.56
LSM4-202ENST00000593564 IFI27L2Q9H2X8 130 aa18.55■□□□□ 0.56
LSM4-202ENST00000593564 C8orf4Q9NR00 106 aa18.55■□□□□ 0.56
LSM4-202ENST00000593564 KIAA1456Q9P272 454 aa18.55■□□□□ 0.56
LSM4-202ENST00000593564 MYL12BO14950 172 aa18.54■□□□□ 0.56
LSM4-202ENST00000593564 UBBP0CG47 229 aa18.54■□□□□ 0.56
LSM4-202ENST00000593564 CRIP2P52943 208 aaPredicted RBP18.54■□□□□ 0.56
LSM4-202ENST00000593564 WNT4P56705 351 aa18.54■□□□□ 0.56
LSM4-202ENST00000593564 C19orf54Q5BKX5 351 aa18.54■□□□□ 0.56
LSM4-202ENST00000593564 FAM27D1Q5T7N8 215 aa18.54■□□□□ 0.56
LSM4-202ENST00000593564 DHRSXQ8N5I4 330 aa18.54■□□□□ 0.56
LSM4-202ENST00000593564 PACRGLQ8N7B6 248 aa18.54■□□□□ 0.56
LSM4-202ENST00000593564 DCUN1D4Q92564 292 aa18.54■□□□□ 0.56
LSM4-202ENST00000593564 NEDD4LQ96PU5 975 aa18.54■□□□□ 0.56
LSM4-202ENST00000593564 ISYNA1Q9NPH2 558 aa18.54■□□□□ 0.56
LSM4-202ENST00000593564 ERGIC3Q9Y282 383 aa18.54■□□□□ 0.56
LSM4-202ENST00000593564 OVOL1O14753 267 aa18.53■□□□□ 0.56
LSM4-202ENST00000593564 NDPQ00604 133 aa18.53■□□□□ 0.56
LSM4-202ENST00000593564 ABRACLQ9P1F3 81 aa18.53■□□□□ 0.56
LSM4-202ENST00000593564 STEAP1Q9UHE8 339 aa18.53■□□□□ 0.56
LSM4-202ENST00000593564 PSORS1C1Q9UIG5 152 aa18.53■□□□□ 0.56
LSM4-202ENST00000593564 DYNC2H1Q8NCM8 4307 aaKnown RBP18.53■□□□□ 0.56
LSM4-202ENST00000593564 DNAH7Q8WXX0 4024 aa18.52■□□□□ 0.56
LSM4-202ENST00000593564 ECSCRQ19T08 205 aa18.52■□□□□ 0.56
LSM4-202ENST00000593564 ZNF660Q6AZW8 331 aaPredicted RBP18.52■□□□□ 0.56
LSM4-202ENST00000593564 LAIR2Q6ISS4 152 aa18.52■□□□□ 0.56
LSM4-202ENST00000593564 FAM131AQ6UXB0 335 aa18.52■□□□□ 0.56
LSM4-202ENST00000593564 PIPOXQ9P0Z9 390 aa18.52■□□□□ 0.56
LSM4-202ENST00000593564 FBXO7Q9Y3I1 522 aa18.52■□□□□ 0.56
LSM4-202ENST00000593564 RYR2Q92736 4967 aa18.51■□□□□ 0.55
LSM4-202ENST00000593564 SOX15O60248 233 aa18.51■□□□□ 0.55
LSM4-202ENST00000593564 RPS27AP62979 156 aaKnown RBP18.51■□□□□ 0.55
LSM4-202ENST00000593564 OR10K2Q6IF99 312 aa18.51■□□□□ 0.55
LSM4-202ENST00000593564 AHSA2Q719I0 299 aa18.51■□□□□ 0.55
LSM4-202ENST00000593564 C6orf201Q7Z4U5 140 aa18.51■□□□□ 0.55
LSM4-202ENST00000593564 TCTEX1D1Q8N7M0 179 aa18.51■□□□□ 0.55
LSM4-202ENST00000593564 IL1F10Q8WWZ1 152 aa18.51■□□□□ 0.55
LSM4-202ENST00000593564 FAAP24Q9BTP7 215 aa18.51■□□□□ 0.55
LSM4-202ENST00000593564 TOLLIPQ9H0E2 274 aa18.51■□□□□ 0.55
LSM4-202ENST00000593564 ALX4Q9H161 411 aaPredicted RBP18.51■□□□□ 0.55
LSM4-202ENST00000593564 FOXA2Q9Y261 457 aaPredicted RBP18.51■□□□□ 0.55
LSM4-202ENST00000593564 A0A1W2PN81 502 aa18.5■□□□□ 0.55
LSM4-202ENST00000593564 RRHO14718 337 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms