RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 HIST1H2BMQ99879 126 aa9.81□□□□□ -0.84
ZNF540-210ENST00000592533 VSIRQ9H7M9 311 aa9.81□□□□□ -0.84
ZNF540-210ENST00000592533 SDF2L1Q9HCN8 221 aa9.81□□□□□ -0.84
ZNF540-210ENST00000592533 PRSS50Q9UI38 385 aa9.81□□□□□ -0.84
ZNF540-210ENST00000592533 VAX2Q9UIW0 290 aa9.81□□□□□ -0.84
ZNF540-210ENST00000592533 ELOA3CA0A087WX78 387 aaPredicted RBP9.8□□□□□ -0.84
ZNF540-210ENST00000592533 C1QTNF9BB2RNN3 333 aa9.8□□□□□ -0.84
ZNF540-210ENST00000592533 PHOX2AO14813 284 aa9.8□□□□□ -0.84
ZNF540-210ENST00000592533 METTL15P1P0C7V9 234 aa9.8□□□□□ -0.84
ZNF540-210ENST00000592533 EIF4EBP1Q13541 118 aaPredicted RBP9.8□□□□□ -0.84
ZNF540-210ENST00000592533 IZUMO4Q1ZYL8 232 aa9.8□□□□□ -0.84
ZNF540-210ENST00000592533 ZNF674Q2M3X9 581 aa9.8□□□□□ -0.84
ZNF540-210ENST00000592533 FBXW9Q5XUX1 488 aa9.8□□□□□ -0.84
ZNF540-210ENST00000592533 SSX7Q7RTT5 188 aa9.8□□□□□ -0.84
ZNF540-210ENST00000592533 MDS2Q8NDY4 140 aa9.8□□□□□ -0.84
ZNF540-210ENST00000592533 RNASE11Q8TAA1 199 aaKnown RBP9.8□□□□□ -0.84
ZNF540-210ENST00000592533 IL1F10Q8WWZ1 152 aa9.8□□□□□ -0.84
ZNF540-210ENST00000592533 ZNF665Q9H7R5 613 aa9.8□□□□□ -0.84
ZNF540-210ENST00000592533 DMRT1Q9Y5R6 373 aa9.8□□□□□ -0.84
ZNF540-210ENST00000592533 SEC14L6B5MCN3 397 aa9.8□□□□□ -0.84
ZNF540-210ENST00000592533 CEBPGP53567 150 aa9.8□□□□□ -0.84
ZNF540-210ENST00000592533 MDP1Q86V88 176 aa9.8□□□□□ -0.84
ZNF540-210ENST00000592533 MCEMP1Q8IX19 187 aa9.8□□□□□ -0.84
ZNF540-210ENST00000592533 SCCPDHQ8NBX0 429 aa9.8□□□□□ -0.84
ZNF540-210ENST00000592533 CTDSP1Q9GZU7 261 aa9.8□□□□□ -0.84
ZNF540-210ENST00000592533 TRBV24-1A0A075B6N3 115 aa9.8□□□□□ -0.84
ZNF540-210ENST00000592533 YIF1AO95070 293 aa9.8□□□□□ -0.84
ZNF540-210ENST00000592533 RAB11AP62491 216 aa9.8□□□□□ -0.84
ZNF540-210ENST00000592533 GABRA6Q16445 453 aa9.8□□□□□ -0.84
ZNF540-210ENST00000592533 P4HA3Q7Z4N8 544 aa9.8□□□□□ -0.84
ZNF540-210ENST00000592533 C1orf87Q8N0U7 546 aa9.8□□□□□ -0.84
ZNF540-210ENST00000592533 DRAM1Q8N682 238 aa9.8□□□□□ -0.84
ZNF540-210ENST00000592533 HES4Q9HCC6 221 aa9.8□□□□□ -0.84
ZNF540-210ENST00000592533 FOXJ2Q9P0K8 574 aa9.8□□□□□ -0.84
ZNF540-210ENST00000592533 HSPB7Q9UBY9 170 aa9.8□□□□□ -0.84
ZNF540-210ENST00000592533 PPP1R3CQ9UQK1 317 aa9.8□□□□□ -0.84
ZNF540-210ENST00000592533 KLF13Q9Y2Y9 288 aaPredicted RBP9.8□□□□□ -0.84
ZNF540-210ENST00000592533 PTPRBP23467 1997 aa9.8□□□□□ -0.84
ZNF540-210ENST00000592533 CLDN34H7C241 214 aa9.79□□□□□ -0.84
ZNF540-210ENST00000592533 IFNA1P01562 189 aa9.79□□□□□ -0.84
ZNF540-210ENST00000592533 SP1P08047 785 aa9.79□□□□□ -0.84
ZNF540-210ENST00000592533 JMJD7P0C870 316 aa9.79□□□□□ -0.84
ZNF540-210ENST00000592533 IAPPP10997 89 aa9.79□□□□□ -0.84
ZNF540-210ENST00000592533 TBC1D28Q2M2D7 210 aa9.79□□□□□ -0.84
ZNF540-210ENST00000592533 GAR1Q9NY12 217 aaKnown RBP9.79□□□□□ -0.84
ZNF540-210ENST00000592533 CYB5BO43169 146 aa9.79□□□□□ -0.84
ZNF540-210ENST00000592533 MEOX1P50221 254 aa9.79□□□□□ -0.84
ZNF540-210ENST00000592533 PLGLB1Q02325 96 aa9.79□□□□□ -0.84
ZNF540-210ENST00000592533 ZNF766Q5HY98 468 aa9.79□□□□□ -0.84
ZNF540-210ENST00000592533 C1orf210Q8IVY1 113 aa9.79□□□□□ -0.84
ZNF540-210ENST00000592533 TAF15Q92804 592 aaKnown RBP eCLIP9.79□□□□□ -0.84
ZNF540-210ENST00000592533 OR4C12Q96R67 309 aa9.79□□□□□ -0.84
ZNF540-210ENST00000592533 TRAPPC2LQ9UL33 140 aa9.79□□□□□ -0.84
ZNF540-210ENST00000592533 DOCK7Q96N67 2140 aa9.78□□□□□ -0.84
ZNF540-210ENST00000592533 MED13Q9UHV7 2174 aa9.78□□□□□ -0.84
ZNF540-210ENST00000592533 A0A1W2PNU3 283 aaPredicted RBP9.78□□□□□ -0.84
ZNF540-210ENST00000592533 SIRPB1O00241 398 aa9.78□□□□□ -0.84
ZNF540-210ENST00000592533 SMPD2O60906 423 aa9.78□□□□□ -0.84
ZNF540-210ENST00000592533 WDR25Q64LD2 544 aaPredicted RBP9.78□□□□□ -0.84
ZNF540-210ENST00000592533 LILRB2Q8N423 598 aa9.78□□□□□ -0.84
ZNF540-210ENST00000592533 ZNF645Q8N7E2 425 aa9.78□□□□□ -0.84
ZNF540-210ENST00000592533 FAM210BQ96KR6 192 aa9.78□□□□□ -0.84
ZNF540-210ENST00000592533 TINAGQ9UJW2 476 aa9.78□□□□□ -0.84
ZNF540-210ENST00000592533 TMEM210A6NLX4 147 aa9.78□□□□□ -0.84
ZNF540-210ENST00000592533 ZFP92A6NM28 416 aa9.78□□□□□ -0.84
ZNF540-210ENST00000592533 SH2D1BO14796 132 aa9.78□□□□□ -0.84
ZNF540-210ENST00000592533 OPN1MWP04001 364 aa9.78□□□□□ -0.84
ZNF540-210ENST00000592533 OPN1MW2P0DN77 364 aa9.78□□□□□ -0.84
ZNF540-210ENST00000592533 OPN1MW3P0DN78 364 aa9.78□□□□□ -0.84
ZNF540-210ENST00000592533 NDUFA6P56556 154 aa9.78□□□□□ -0.84
ZNF540-210ENST00000592533 TNFRSF9Q07011 255 aa9.78□□□□□ -0.84
ZNF540-210ENST00000592533 SLC38A11Q08AI6 406 aa9.78□□□□□ -0.84
ZNF540-210ENST00000592533 ATP6V1FQ16864 119 aa9.78□□□□□ -0.84
ZNF540-210ENST00000592533 PYY3Q5JQD4 70 aa9.78□□□□□ -0.84
ZNF540-210ENST00000592533 FGFRL1Q8N441 504 aa9.78□□□□□ -0.84
ZNF540-210ENST00000592533 PLA2G3Q9NZ20 509 aa9.78□□□□□ -0.84
ZNF540-210ENST00000592533 ZMAT5Q9UDW3 170 aaKnown RBP9.78□□□□□ -0.84
ZNF540-210ENST00000592533 URGCP-MRPS24S4R325 110 aa9.78□□□□□ -0.84
ZNF540-210ENST00000592533 MAP1LC3B2A6NCE7 125 aa9.78□□□□□ -0.84
ZNF540-210ENST00000592533 IQCF6A8MYZ5 107 aa9.78□□□□□ -0.84
ZNF540-210ENST00000592533 C3orf80F5H4A9 247 aa9.78□□□□□ -0.84
ZNF540-210ENST00000592533 KLRC4-KLRK1H3BQV0 150 aa9.78□□□□□ -0.84
ZNF540-210ENST00000592533 RAC2P15153 192 aa9.78□□□□□ -0.84
ZNF540-210ENST00000592533 S100A2P29034 98 aa9.78□□□□□ -0.84
ZNF540-210ENST00000592533 LCN15Q6UWW0 184 aa9.78□□□□□ -0.84
ZNF540-210ENST00000592533 SPNS3Q6ZMD2 512 aa9.78□□□□□ -0.84
ZNF540-210ENST00000592533 HIST3H2BBQ8N257 126 aa9.78□□□□□ -0.84
ZNF540-210ENST00000592533 WDYHV1Q96HA8 205 aa9.78□□□□□ -0.84
ZNF540-210ENST00000592533 CDX2Q99626 313 aaPredicted RBP9.78□□□□□ -0.84
ZNF540-210ENST00000592533 MRPL37Q9BZE1 423 aaKnown RBP9.78□□□□□ -0.84
ZNF540-210ENST00000592533 MAP1LC3BQ9GZQ8 125 aa9.78□□□□□ -0.84
ZNF540-210ENST00000592533 KCNS2Q9ULS6 477 aa9.78□□□□□ -0.84
ZNF540-210ENST00000592533 TRIOBPQ9H2D6 2365 aa9.77□□□□□ -0.84
ZNF540-210ENST00000592533 KIAA2026Q5HYC2 2103 aa9.77□□□□□ -0.85
ZNF540-210ENST00000592533 TRGC2P03986 189 aa9.77□□□□□ -0.85
ZNF540-210ENST00000592533 CEACAM6P40199 344 aa9.77□□□□□ -0.85
ZNF540-210ENST00000592533 CD81P60033 236 aa9.77□□□□□ -0.85
ZNF540-210ENST00000592533 C3AR1Q16581 482 aa9.77□□□□□ -0.85
ZNF540-210ENST00000592533 FAM209BQ5JX69 171 aa9.77□□□□□ -0.85
ZNF540-210ENST00000592533 TCTEX1D1Q8N7M0 179 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms