RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 PLA2G7Q13093 441 aa21.62■■□□□ 1.05
SMAD4-213ENST00000591914 NDUFA11Q86Y39 141 aa21.62■■□□□ 1.05
SMAD4-213ENST00000591914 LYG1Q8N1E2 194 aa21.62■■□□□ 1.05
SMAD4-213ENST00000591914 OR5AU1Q8NGC0 362 aa21.62■■□□□ 1.05
SMAD4-213ENST00000591914 OR2T10Q8NGZ9 312 aa21.62■■□□□ 1.05
SMAD4-213ENST00000591914 ARHGAP5-AS1Q96IT6 56 aa21.62■■□□□ 1.05
SMAD4-213ENST00000591914 HDHD3Q9BSH5 251 aaPredicted RBP21.62■■□□□ 1.05
SMAD4-213ENST00000591914 RAB22AQ9UL26 194 aa21.62■■□□□ 1.05
SMAD4-213ENST00000591914 ADARB2-AS1A8MUL3 147 aa21.61■■□□□ 1.05
SMAD4-213ENST00000591914 PLAC9Q5JTB6 97 aa21.61■■□□□ 1.05
SMAD4-213ENST00000591914 C9orf152Q5JTZ5 239 aa21.61■■□□□ 1.05
SMAD4-213ENST00000591914 CENPVQ7Z7K6 275 aaPredicted RBP21.61■■□□□ 1.05
SMAD4-213ENST00000591914 NR2C2APQ86WQ0 139 aa21.61■■□□□ 1.05
SMAD4-213ENST00000591914 ODF3L1Q8IXM7 274 aa21.61■■□□□ 1.05
SMAD4-213ENST00000591914 PECRQ9BY49 303 aa21.61■■□□□ 1.05
SMAD4-213ENST00000591914 C12orf4Q9NQ89 552 aa21.61■■□□□ 1.05
SMAD4-213ENST00000591914 SETD6Q8TBK2 473 aa21.6■■□□□ 1.05
SMAD4-213ENST00000591914 IL1F10Q8WWZ1 152 aa21.6■■□□□ 1.05
SMAD4-213ENST00000591914 TXNL4BQ9NX01 149 aaKnown RBP21.6■■□□□ 1.05
SMAD4-213ENST00000591914 STUB1Q9UNE7 303 aa21.6■■□□□ 1.05
SMAD4-213ENST00000591914 NOTCH1P46531 2555 aa21.6■■□□□ 1.05
SMAD4-213ENST00000591914 ZNF736B4DX44 427 aaPredicted RBP21.59■■□□□ 1.05
SMAD4-213ENST00000591914 MOSP00540 346 aa21.59■■□□□ 1.05
SMAD4-213ENST00000591914 CD83Q01151 205 aa21.59■■□□□ 1.05
SMAD4-213ENST00000591914 NSUN5P1Q3KNT7 163 aa21.59■■□□□ 1.05
SMAD4-213ENST00000591914 KCTD21Q4G0X4 260 aa21.59■■□□□ 1.05
SMAD4-213ENST00000591914 MGAT4AQ9UM21 535 aa21.59■■□□□ 1.05
SMAD4-213ENST00000591914 OPN1MWP04001 364 aa21.58■■□□□ 1.05
SMAD4-213ENST00000591914 OPN1MW2P0DN77 364 aa21.58■■□□□ 1.05
SMAD4-213ENST00000591914 OPN1MW3P0DN78 364 aa21.58■■□□□ 1.05
SMAD4-213ENST00000591914 TCTEX1D4Q5JR98 221 aa21.58■■□□□ 1.05
SMAD4-213ENST00000591914 OR2AK2Q8NG84 335 aa21.58■■□□□ 1.05
SMAD4-213ENST00000591914 Q9N2K0 584 aa21.58■■□□□ 1.05
SMAD4-213ENST00000591914 PLSCR3Q9NRY6 295 aa21.58■■□□□ 1.05
SMAD4-213ENST00000591914 RAB6AP20340 208 aa21.57■■□□□ 1.04
SMAD4-213ENST00000591914 HLA-DRB3P79483 266 aa21.57■■□□□ 1.04
SMAD4-213ENST00000591914 LSAMPQ13449 338 aa21.57■■□□□ 1.04
SMAD4-213ENST00000591914 CMSS1Q9BQ75 279 aaKnown RBP21.57■■□□□ 1.04
SMAD4-213ENST00000591914 IFI27L2Q9H2X8 130 aa21.57■■□□□ 1.04
SMAD4-213ENST00000591914 KCNK7Q9Y2U2 307 aa21.57■■□□□ 1.04
SMAD4-213ENST00000591914 NCBP2LA6PVI3 153 aaKnown RBP21.56■■□□□ 1.04
SMAD4-213ENST00000591914 IGHG2P01859 326 aa21.56■■□□□ 1.04
SMAD4-213ENST00000591914 MOGAT2Q3SYC2 334 aa21.56■■□□□ 1.04
SMAD4-213ENST00000591914 C10orf99Q6UWK7 81 aa21.56■■□□□ 1.04
SMAD4-213ENST00000591914 ZNF833PQ6ZTB9 187 aa21.56■■□□□ 1.04
SMAD4-213ENST00000591914 Q8N9W7 124 aa21.56■■□□□ 1.04
SMAD4-213ENST00000591914 OR8H1Q8NGG4 311 aa21.56■■□□□ 1.04
SMAD4-213ENST00000591914 PTX4Q96A99 478 aa21.56■■□□□ 1.04
SMAD4-213ENST00000591914 RAB3CQ96E17 227 aa21.56■■□□□ 1.04
SMAD4-213ENST00000591914 SSR3Q9UNL2 185 aa21.56■■□□□ 1.04
SMAD4-213ENST00000591914 SAA2-SAA4A0A096LPE2 208 aa21.55■■□□□ 1.04
SMAD4-213ENST00000591914 A0A0B4J203 849 aa21.55■■□□□ 1.04
SMAD4-213ENST00000591914 SAA2P0DJI9 122 aaPredicted RBP21.55■■□□□ 1.04
SMAD4-213ENST00000591914 LIN7CQ9NUP9 197 aaKnown RBP21.55■■□□□ 1.04
SMAD4-213ENST00000591914 SMIM30A4D0T7 59 aa21.54■■□□□ 1.04
SMAD4-213ENST00000591914 NOTOA8MTQ0 251 aa21.54■■□□□ 1.04
SMAD4-213ENST00000591914 RAB27BO00194 218 aa21.54■■□□□ 1.04
SMAD4-213ENST00000591914 SLC2A2P11168 524 aaPredicted RBP21.54■■□□□ 1.04
SMAD4-213ENST00000591914 OR3A3P47888 321 aa21.54■■□□□ 1.04
SMAD4-213ENST00000591914 TPRA1Q86W33 373 aa21.54■■□□□ 1.04
SMAD4-213ENST00000591914 OR4F17Q8NGA8 305 aa21.54■■□□□ 1.04
SMAD4-213ENST00000591914 OR4X2Q8NGF9 303 aa21.54■■□□□ 1.04
SMAD4-213ENST00000591914 OR10R2Q8NGX6 335 aa21.54■■□□□ 1.04
SMAD4-213ENST00000591914 RBMXL1Q96E39 390 aaKnown RBP21.54■■□□□ 1.04
SMAD4-213ENST00000591914 OR4F4Q96R69 305 aa21.54■■□□□ 1.04
SMAD4-213ENST00000591914 MRPL20Q9BYC9 149 aaKnown RBP21.54■■□□□ 1.04
SMAD4-213ENST00000591914 PARP12Q9H0J9 701 aaKnown RBP21.54■■□□□ 1.04
SMAD4-213ENST00000591914 ABCG5Q9H222 651 aa21.54■■□□□ 1.04
SMAD4-213ENST00000591914 OR51E2Q9H255 320 aa21.54■■□□□ 1.04
SMAD4-213ENST00000591914 SLC23A1Q9UHI7 598 aa21.54■■□□□ 1.04
SMAD4-213ENST00000591914 ITGB1BP1O14713 200 aa21.53■■□□□ 1.04
SMAD4-213ENST00000591914 ST8SIA5O15466 376 aa21.53■■□□□ 1.04
SMAD4-213ENST00000591914 SCTP09683 121 aa21.53■■□□□ 1.04
SMAD4-213ENST00000591914 DEFA6Q01524 100 aa21.53■■□□□ 1.04
SMAD4-213ENST00000591914 FAM71F2Q6NXP2 309 aa21.53■■□□□ 1.04
SMAD4-213ENST00000591914 SLC35E3Q7Z769 313 aa21.53■■□□□ 1.04
SMAD4-213ENST00000591914 FAM71E2Q8N5Q1 922 aa21.53■■□□□ 1.04
SMAD4-213ENST00000591914 CHPT1Q8WUD6 406 aa21.53■■□□□ 1.04
SMAD4-213ENST00000591914 R3HDM4Q96D70 268 aa21.53■■□□□ 1.04
SMAD4-213ENST00000591914 S1PR3Q99500 378 aa21.53■■□□□ 1.04
SMAD4-213ENST00000591914 NABP2Q9BQ15 211 aa21.53■■□□□ 1.04
SMAD4-213ENST00000591914 OR1A1Q9P1Q5 309 aa21.53■■□□□ 1.04
SMAD4-213ENST00000591914 PSMB11A5LHX3 300 aa21.52■■□□□ 1.04
SMAD4-213ENST00000591914 SERPINE3A8MV23 424 aa21.52■■□□□ 1.04
SMAD4-213ENST00000591914 MFNGO00587 321 aa21.52■■□□□ 1.04
SMAD4-213ENST00000591914 ZBTB25P24278 435 aa21.52■■□□□ 1.04
SMAD4-213ENST00000591914 GADD45AP24522 165 aa21.52■■□□□ 1.04
SMAD4-213ENST00000591914 NEDD8Q15843 81 aa21.52■■□□□ 1.04
SMAD4-213ENST00000591914 NOL4LQ96MY1 436 aaPredicted RBP21.52■■□□□ 1.04
SMAD4-213ENST00000591914 ZNF251Q9BRH9 671 aa21.52■■□□□ 1.04
SMAD4-213ENST00000591914 AGMATQ9BSE5 352 aa21.52■■□□□ 1.04
SMAD4-213ENST00000591914 PIPOXQ9P0Z9 390 aa21.52■■□□□ 1.04
SMAD4-213ENST00000591914 TSSC4Q9Y5U2 329 aaPredicted RBP21.52■■□□□ 1.04
SMAD4-213ENST00000591914 TCRBV4S1A1TA0A5B7 111 aa21.51■■□□□ 1.03
SMAD4-213ENST00000591914 METTL21EPA6NDL7 271 aa21.51■■□□□ 1.03
SMAD4-213ENST00000591914 TRDCB7Z8K6 153 aa21.51■■□□□ 1.03
SMAD4-213ENST00000591914 RAB29O14966 203 aa21.51■■□□□ 1.03
SMAD4-213ENST00000591914 KCNAB3O43448 404 aa21.51■■□□□ 1.03
SMAD4-213ENST00000591914 WIPF1O43516 503 aa21.51■■□□□ 1.03
SMAD4-213ENST00000591914 CD3GP09693 182 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms