RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 RITA1Q96K30 269 aa15.04■□□□□ -0
TRAF4-216ENST00000586813 DERL3Q96Q80 235 aa15.04■□□□□ -0
TRAF4-216ENST00000586813 OR5B12Q96R08 314 aa15.04■□□□□ -0
TRAF4-216ENST00000586813 NABP2Q9BQ15 211 aa15.04■□□□□ -0
TRAF4-216ENST00000586813 ZNF251Q9BRH9 671 aa15.04■□□□□ -0
TRAF4-216ENST00000586813 SORL1Q92673 2214 aa15.04■□□□□ -0
TRAF4-216ENST00000586813 TRAV41A0A0B4J266 112 aa15.03■□□□□ -0
TRAF4-216ENST00000586813 PNMA8CA0A1B0GUJ8 204 aa15.03■□□□□ -0
TRAF4-216ENST00000586813 NBR2O15453 112 aa15.03■□□□□ -0
TRAF4-216ENST00000586813 BLVRBP30043 206 aaPredicted RBP15.03■□□□□ -0
TRAF4-216ENST00000586813 CAPGP40121 348 aa15.03■□□□□ -0
TRAF4-216ENST00000586813 TAS2R43P59537 309 aa15.03■□□□□ -0
TRAF4-216ENST00000586813 HTD2P86397 168 aa15.03■□□□□ -0
TRAF4-216ENST00000586813 DOC2BQ14184 412 aa15.03■□□□□ -0
TRAF4-216ENST00000586813 ZNF833PQ6ZTB9 187 aa15.03■□□□□ -0
TRAF4-216ENST00000586813 C5orf24Q7Z6I8 188 aa15.03■□□□□ -0
TRAF4-216ENST00000586813 NKAIN3Q8N8D7 197 aa15.03■□□□□ -0
TRAF4-216ENST00000586813 FAM46BQ96A09 425 aa15.03■□□□□ -0
TRAF4-216ENST00000586813 ANKRD60Q9BZ19 345 aa15.03■□□□□ -0
TRAF4-216ENST00000586813 ISYNA1Q9NPH2 558 aa15.03■□□□□ -0
TRAF4-216ENST00000586813 SMAD5-AS1Q9Y6J3 95 aa15.03■□□□□ -0
TRAF4-216ENST00000586813 SAA2-SAA4A0A096LPE2 208 aa15.02■□□□□ -0
TRAF4-216ENST00000586813 C3orf84H3BNL1 204 aa15.02■□□□□ -0
TRAF4-216ENST00000586813 YPEL1O60688 119 aa15.02■□□□□ -0
TRAF4-216ENST00000586813 BAG2O95816 211 aa15.02■□□□□ -0
TRAF4-216ENST00000586813 SAA2P0DJI9 122 aaPredicted RBP15.02■□□□□ -0
TRAF4-216ENST00000586813 C5orf64Q2M2E5 130 aa15.02■□□□□ -0
TRAF4-216ENST00000586813 C6orf141Q5SZD1 244 aa15.02■□□□□ -0
TRAF4-216ENST00000586813 YPEL2Q96QA6 119 aa15.02■□□□□ -0
TRAF4-216ENST00000586813 UQCC2Q9BRT2 126 aa15.02■□□□□ -0
TRAF4-216ENST00000586813 RGS11O94810 467 aa15.01□□□□□ -0.01
TRAF4-216ENST00000586813 NDUFA3O95167 84 aa15.01□□□□□ -0.01
TRAF4-216ENST00000586813 OR3A3P47888 321 aa15.01□□□□□ -0.01
TRAF4-216ENST00000586813 RAB9AP51151 201 aa15.01□□□□□ -0.01
TRAF4-216ENST00000586813 ST3GAL4Q11206 333 aa15.01□□□□□ -0.01
TRAF4-216ENST00000586813 LY6G6FQ5SQ64 297 aa15.01□□□□□ -0.01
TRAF4-216ENST00000586813 LIN54Q6MZP7 749 aa15.01□□□□□ -0.01
TRAF4-216ENST00000586813 MINDY2Q8NBR6 621 aa15.01□□□□□ -0.01
TRAF4-216ENST00000586813 NPBQ8NG41 125 aa15.01□□□□□ -0.01
TRAF4-216ENST00000586813 OR2AK2Q8NG84 335 aa15.01□□□□□ -0.01
TRAF4-216ENST00000586813 CYGBQ8WWM9 190 aa15.01□□□□□ -0.01
TRAF4-216ENST00000586813 DCUN1D4Q92564 292 aa15.01□□□□□ -0.01
TRAF4-216ENST00000586813 GALMQ96C23 342 aa15.01□□□□□ -0.01
TRAF4-216ENST00000586813 KIAA1456Q9P272 454 aa15.01□□□□□ -0.01
TRAF4-216ENST00000586813 DNAH7Q8WXX0 4024 aa15.01□□□□□ -0.01
TRAF4-216ENST00000586813 OVOL1O14753 267 aa15□□□□□ -0.01
TRAF4-216ENST00000586813 NDPQ00604 133 aa15□□□□□ -0.01
TRAF4-216ENST00000586813 FAM27D1Q5T7N8 215 aa15□□□□□ -0.01
TRAF4-216ENST00000586813 ZNF429Q86V71 674 aa15□□□□□ -0.01
TRAF4-216ENST00000586813 SETD9Q8NE22 299 aa15□□□□□ -0.01
TRAF4-216ENST00000586813 GGHQ92820 318 aa15□□□□□ -0.01
TRAF4-216ENST00000586813 CST11Q9H112 138 aa15□□□□□ -0.01
TRAF4-216ENST00000586813 IFI27L2Q9H2X8 130 aa15□□□□□ -0.01
TRAF4-216ENST00000586813 GHRLQ9UBU3 117 aa15□□□□□ -0.01
TRAF4-216ENST00000586813 CELP19835 753 aa14.99□□□□□ -0.01
TRAF4-216ENST00000586813 HMGN3Q15651 99 aa14.99□□□□□ -0.01
TRAF4-216ENST00000586813 ECSCRQ19T08 205 aa14.99□□□□□ -0.01
TRAF4-216ENST00000586813 LRRC36Q1X8D7 754 aa14.99□□□□□ -0.01
TRAF4-216ENST00000586813 C19orf54Q5BKX5 351 aa14.99□□□□□ -0.01
TRAF4-216ENST00000586813 TTC23Q5W5X9 447 aa14.99□□□□□ -0.01
TRAF4-216ENST00000586813 FAM71F2Q6NXP2 309 aa14.99□□□□□ -0.01
TRAF4-216ENST00000586813 THRSPQ92748 146 aa14.99□□□□□ -0.01
TRAF4-216ENST00000586813 SULT4A1Q9BR01 284 aa14.99□□□□□ -0.01
TRAF4-216ENST00000586813 ALX4Q9H161 411 aaPredicted RBP14.99□□□□□ -0.01
TRAF4-216ENST00000586813 FBXO7Q9Y3I1 522 aa14.99□□□□□ -0.01
TRAF4-216ENST00000586813 A0A1W2PN81 502 aa14.98□□□□□ -0.01
TRAF4-216ENST00000586813 EFCAB10A6NFE3 127 aa14.98□□□□□ -0.01
TRAF4-216ENST00000586813 SOX15O60248 233 aa14.98□□□□□ -0.01
TRAF4-216ENST00000586813 CD1AP06126 327 aa14.98□□□□□ -0.01
TRAF4-216ENST00000586813 MAPK3P27361 379 aaPredicted RBP14.98□□□□□ -0.01
TRAF4-216ENST00000586813 CHRNA7P36544 502 aa14.98□□□□□ -0.01
TRAF4-216ENST00000586813 CRIP2P52943 208 aaPredicted RBP14.98□□□□□ -0.01
TRAF4-216ENST00000586813 FAM131AQ6UXB0 335 aa14.98□□□□□ -0.01
TRAF4-216ENST00000586813 SBSPONQ8IVN8 264 aa14.98□□□□□ -0.01
TRAF4-216ENST00000586813 ABRACLQ9P1F3 81 aa14.98□□□□□ -0.01
TRAF4-216ENST00000586813 FOXA2Q9Y261 457 aaPredicted RBP14.98□□□□□ -0.01
TRAF4-216ENST00000586813 ERGIC3Q9Y282 383 aa14.98□□□□□ -0.01
TRAF4-216ENST00000586813 LRRC42Q9Y546 428 aa14.98□□□□□ -0.01
TRAF4-216ENST00000586813 DYNC2H1Q8NCM8 4307 aaKnown RBP14.98□□□□□ -0.01
TRAF4-216ENST00000586813 MYL12BO14950 172 aa14.97□□□□□ -0.01
TRAF4-216ENST00000586813 ST8SIA5O15466 376 aa14.97□□□□□ -0.01
TRAF4-216ENST00000586813 SAP30O75446 220 aa14.97□□□□□ -0.01
TRAF4-216ENST00000586813 SLURP1P55000 103 aa14.97□□□□□ -0.01
TRAF4-216ENST00000586813 WNT4P56705 351 aa14.97□□□□□ -0.01
TRAF4-216ENST00000586813 GABPB1Q06547 395 aaPredicted RBP14.97□□□□□ -0.01
TRAF4-216ENST00000586813 TCTEX1D1Q8N7M0 179 aa14.97□□□□□ -0.01
TRAF4-216ENST00000586813 IL1F10Q8WWZ1 152 aa14.97□□□□□ -0.01
TRAF4-216ENST00000586813 DLX4Q92988 240 aaPredicted RBP14.97□□□□□ -0.01
TRAF4-216ENST00000586813 RCHY1Q96PM5 261 aa14.97□□□□□ -0.01
TRAF4-216ENST00000586813 NEDD4LQ96PU5 975 aa14.97□□□□□ -0.01
TRAF4-216ENST00000586813 TOLLIPQ9H0E2 274 aa14.97□□□□□ -0.01
TRAF4-216ENST00000586813 CNOT2Q9NZN8 540 aaKnown RBP14.97□□□□□ -0.01
TRAF4-216ENST00000586813 PIPOXQ9P0Z9 390 aa14.97□□□□□ -0.01
TRAF4-216ENST00000586813 STEAP1Q9UHE8 339 aa14.97□□□□□ -0.01
TRAF4-216ENST00000586813 LINC01619G3V211 115 aa14.96□□□□□ -0.01
TRAF4-216ENST00000586813 LGALS1P09382 135 aaKnown RBP14.96□□□□□ -0.01
TRAF4-216ENST00000586813 UBBP0CG47 229 aa14.96□□□□□ -0.01
TRAF4-216ENST00000586813 SPNP16150 400 aa14.96□□□□□ -0.01
TRAF4-216ENST00000586813 ZNF660Q6AZW8 331 aaPredicted RBP14.96□□□□□ -0.01
TRAF4-216ENST00000586813 OR10K2Q6IF99 312 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms