RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 SIGLEC5O15389 551 aa11.35□□□□□ -0.59
RNF43-208ENST00000584437 LEPROTL1O95214 131 aa11.35□□□□□ -0.59
RNF43-208ENST00000584437 EPHA8P29322 1005 aaPredicted RBP11.35□□□□□ -0.59
RNF43-208ENST00000584437 SIGLEC14Q08ET2 396 aa11.35□□□□□ -0.59
RNF43-208ENST00000584437 RBPMS2Q6ZRY4 209 aaKnown RBP11.35□□□□□ -0.59
RNF43-208ENST00000584437 ARRDC1-AS1Q9H2J1 176 aa11.35□□□□□ -0.59
RNF43-208ENST00000584437 WIPI2Q9Y4P8 454 aa11.35□□□□□ -0.59
RNF43-208ENST00000584437 NHSQ6T4R5 1651 aa11.35□□□□□ -0.59
RNF43-208ENST00000584437 CD74P04233 296 aa11.34□□□□□ -0.59
RNF43-208ENST00000584437 COX6CP09669 75 aa11.34□□□□□ -0.59
RNF43-208ENST00000584437 COMPP49747 757 aaPredicted RBP11.34□□□□□ -0.59
RNF43-208ENST00000584437 FGF12P61328 243 aa11.34□□□□□ -0.59
RNF43-208ENST00000584437 APCDD1LQ8NCL9 501 aa11.34□□□□□ -0.59
RNF43-208ENST00000584437 SLC25A40Q8TBP6 338 aa11.34□□□□□ -0.59
RNF43-208ENST00000584437 ABHD3Q8WU67 409 aa11.34□□□□□ -0.59
RNF43-208ENST00000584437 CDX2Q99626 313 aaPredicted RBP11.34□□□□□ -0.59
RNF43-208ENST00000584437 GGACTQ9BVM4 153 aa11.34□□□□□ -0.59
RNF43-208ENST00000584437 COA4Q9NYJ1 87 aa11.34□□□□□ -0.59
RNF43-208ENST00000584437 COL9A1P20849 921 aa11.34□□□□□ -0.59
RNF43-208ENST00000584437 AGAP20933 346 aa11.34□□□□□ -0.59
RNF43-208ENST00000584437 GCSHP23434 173 aa11.34□□□□□ -0.59
RNF43-208ENST00000584437 PCP4P48539 62 aa11.34□□□□□ -0.59
RNF43-208ENST00000584437 MNX1P50219 401 aaPredicted RBP11.34□□□□□ -0.59
RNF43-208ENST00000584437 BHLHA15Q7RTS1 189 aaPredicted RBP11.34□□□□□ -0.59
RNF43-208ENST00000584437 TREM2Q9NZC2 230 aa11.34□□□□□ -0.59
RNF43-208ENST00000584437 SMCHD1A6NHR9 2005 aa11.34□□□□□ -0.59
RNF43-208ENST00000584437 ITGBL1O95965 494 aaPredicted RBP11.34□□□□□ -0.59
RNF43-208ENST00000584437 AMY1AP04745 511 aa11.34□□□□□ -0.59
RNF43-208ENST00000584437 CELA2BP08218 269 aaPredicted RBP11.34□□□□□ -0.59
RNF43-208ENST00000584437 IFI6P09912 130 aa11.34□□□□□ -0.59
RNF43-208ENST00000584437 FOLR2P14207 255 aa11.34□□□□□ -0.59
RNF43-208ENST00000584437 INO80CQ6PI98 192 aaPredicted RBP11.34□□□□□ -0.59
RNF43-208ENST00000584437 SFTPA2Q8IWL1 248 aa11.34□□□□□ -0.59
RNF43-208ENST00000584437 SFTPA1Q8IWL2 248 aa11.34□□□□□ -0.59
RNF43-208ENST00000584437 ECM29Q5VYK3 1845 aa11.34□□□□□ -0.59
RNF43-208ENST00000584437 ASCC3Q8N3C0 2202 aaKnown RBP11.34□□□□□ -0.59
RNF43-208ENST00000584437 IGHV1OR15-9A0A0B4J2B8 117 aa11.34□□□□□ -0.59
RNF43-208ENST00000584437 HOXA4Q00056 320 aaPredicted RBP11.34□□□□□ -0.59
RNF43-208ENST00000584437 LRRC75BQ2VPJ9 315 aa11.34□□□□□ -0.59
RNF43-208ENST00000584437 WDR25Q64LD2 544 aaPredicted RBP11.34□□□□□ -0.59
RNF43-208ENST00000584437 MOGAT3Q86VF5 341 aa11.34□□□□□ -0.59
RNF43-208ENST00000584437 OR10S1Q8NGN2 331 aa11.34□□□□□ -0.59
RNF43-208ENST00000584437 FAM222BQ8WU58 562 aa11.34□□□□□ -0.59
RNF43-208ENST00000584437 TMEM70Q9BUB7 260 aa11.34□□□□□ -0.59
RNF43-208ENST00000584437 PLA2G2FQ9BZM2 168 aa11.34□□□□□ -0.59
RNF43-208ENST00000584437 CD8AP01732 235 aa11.33□□□□□ -0.6
RNF43-208ENST00000584437 ZNF735P0CB33 412 aa11.33□□□□□ -0.6
RNF43-208ENST00000584437 TRGC1P0CF51 173 aa11.33□□□□□ -0.6
RNF43-208ENST00000584437 TEX30Q5JUR7 227 aa11.33□□□□□ -0.6
RNF43-208ENST00000584437 C1orf174Q8IYL3 243 aa11.33□□□□□ -0.6
RNF43-208ENST00000584437 PMCHL2Q9BQD1 86 aa11.33□□□□□ -0.6
RNF43-208ENST00000584437 SCN1AP35498 2009 aa11.33□□□□□ -0.6
RNF43-208ENST00000584437 CENPVL1A0A0U1RR11 272 aa11.33□□□□□ -0.6
RNF43-208ENST00000584437 UPK3AO75631 287 aa11.33□□□□□ -0.6
RNF43-208ENST00000584437 RECKO95980 971 aa11.33□□□□□ -0.6
RNF43-208ENST00000584437 MT-CO3P00414 261 aa11.33□□□□□ -0.6
RNF43-208ENST00000584437 RAB37Q96AX2 223 aa11.33□□□□□ -0.6
RNF43-208ENST00000584437 RAB1BQ9H0U4 201 aa11.33□□□□□ -0.6
RNF43-208ENST00000584437 CEACAM21Q3KPI0 293 aa11.33□□□□□ -0.6
RNF43-208ENST00000584437 OR1N2Q8NGR9 330 aa11.33□□□□□ -0.6
RNF43-208ENST00000584437 MARS2Q96GW9 593 aaKnown RBP11.33□□□□□ -0.6
RNF43-208ENST00000584437 CARHSP1Q9Y2V2 147 aaKnown RBP11.33□□□□□ -0.6
RNF43-208ENST00000584437 INSIG2Q9Y5U4 225 aa11.33□□□□□ -0.6
RNF43-208ENST00000584437 GCM2O75603 506 aaPredicted RBP11.33□□□□□ -0.6
RNF43-208ENST00000584437 MGPP08493 103 aa11.33□□□□□ -0.6
RNF43-208ENST00000584437 LIFP15018 202 aa11.33□□□□□ -0.6
RNF43-208ENST00000584437 SPANXN1Q5VSR9 72 aa11.33□□□□□ -0.6
RNF43-208ENST00000584437 TMEM92Q6UXU6 159 aa11.33□□□□□ -0.6
RNF43-208ENST00000584437 NPTNQ9Y639 398 aa11.33□□□□□ -0.6
RNF43-208ENST00000584437 KBTBD11O94819 623 aa11.33□□□□□ -0.6
RNF43-208ENST00000584437 PPP1CCP36873 323 aaKnown RBP11.33□□□□□ -0.6
RNF43-208ENST00000584437 PRNTQ86SH4 94 aa11.33□□□□□ -0.6
RNF43-208ENST00000584437 C9orf40Q8IXQ3 194 aa11.33□□□□□ -0.6
RNF43-208ENST00000584437 NRTNQ99748 197 aa11.33□□□□□ -0.6
RNF43-208ENST00000584437 LHX9Q9NQ69 397 aa11.33□□□□□ -0.6
RNF43-208ENST00000584437 PCM1Q15154 2024 aa11.32□□□□□ -0.6
RNF43-208ENST00000584437 UCN2Q96RP3 112 aa11.32□□□□□ -0.6
RNF43-208ENST00000584437 SCNM1Q9BWG6 230 aa11.32□□□□□ -0.6
RNF43-208ENST00000584437 TRAV39A0A0B4J263 110 aa11.32□□□□□ -0.6
RNF43-208ENST00000584437 TMEM189A5PLL7 270 aa11.32□□□□□ -0.6
RNF43-208ENST00000584437 HEXA-AS1Q9H8Q6 139 aa11.32□□□□□ -0.6
RNF43-208ENST00000584437 ABCA3Q99758 1704 aa11.32□□□□□ -0.6
RNF43-208ENST00000584437 FAM157AC9JC47 383 aa11.32□□□□□ -0.6
RNF43-208ENST00000584437 UQCRFS1P47985 274 aa11.32□□□□□ -0.6
RNF43-208ENST00000584437 SMAGPQ0VAQ4 97 aa11.32□□□□□ -0.6
RNF43-208ENST00000584437 TMEM183AQ8IXX5 376 aa11.32□□□□□ -0.6
RNF43-208ENST00000584437 OR8B3Q8NGG8 313 aa11.32□□□□□ -0.6
RNF43-208ENST00000584437 OR8B2Q96RD0 313 aa11.32□□□□□ -0.6
RNF43-208ENST00000584437 HLA-DRB1P01911 266 aa11.32□□□□□ -0.6
RNF43-208ENST00000584437 TWIST1Q15672 202 aa11.32□□□□□ -0.6
RNF43-208ENST00000584437 ZNF841Q6ZN19 808 aa11.32□□□□□ -0.6
RNF43-208ENST00000584437 F5P12259 2224 aa11.32□□□□□ -0.6
RNF43-208ENST00000584437 MAP1BP46821 2468 aaKnown RBP11.31□□□□□ -0.6
RNF43-208ENST00000584437 CXorf66Q5JRM2 361 aaPredicted RBP11.31□□□□□ -0.6
RNF43-208ENST00000584437 ZNF721Q8TF20 911 aa11.31□□□□□ -0.6
RNF43-208ENST00000584437 QTRT1Q9BXR0 403 aaKnown RBP11.31□□□□□ -0.6
RNF43-208ENST00000584437 CBLN4Q9NTU7 201 aa11.31□□□□□ -0.6
RNF43-208ENST00000584437 IGKV1D-16P01601 117 aa11.31□□□□□ -0.6
RNF43-208ENST00000584437 SLC35B1P78383 322 aa11.31□□□□□ -0.6
RNF43-208ENST00000584437 OR8G5Q8NG78 346 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms