RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 FOXI3A8MTJ6 420 aaPredicted RBP8.56□□□□□ -1.04
TOP3A-210ENST00000580713 CTDSPLO15194 276 aa8.56□□□□□ -1.04
TOP3A-210ENST00000580713 RAMP3O60896 148 aa8.56□□□□□ -1.04
TOP3A-210ENST00000580713 OR7C1O76099 320 aaPredicted RBP8.56□□□□□ -1.04
TOP3A-210ENST00000580713 HLA-DQB1P01920 261 aa8.56□□□□□ -1.04
TOP3A-210ENST00000580713 ARG1P05089 322 aa8.56□□□□□ -1.04
TOP3A-210ENST00000580713 GSTP1P09211 210 aaKnown RBP8.56□□□□□ -1.04
TOP3A-210ENST00000580713 GNB3P16520 340 aa8.56□□□□□ -1.04
TOP3A-210ENST00000580713 TMEM50BP56557 158 aa8.56□□□□□ -1.04
TOP3A-210ENST00000580713 ERVFRD-1P60508 538 aa8.56□□□□□ -1.04
TOP3A-210ENST00000580713 MRPS10P82664 201 aaKnown RBP8.56□□□□□ -1.04
TOP3A-210ENST00000580713 ARL6IP1Q15041 203 aa8.56□□□□□ -1.04
TOP3A-210ENST00000580713 MPV17LQ2QL34 196 aa8.56□□□□□ -1.04
TOP3A-210ENST00000580713 CDNFQ49AH0 187 aa8.56□□□□□ -1.04
TOP3A-210ENST00000580713 SPIN3Q5JUX0 258 aa8.56□□□□□ -1.04
TOP3A-210ENST00000580713 OR8H2Q8N162 312 aa8.56□□□□□ -1.04
TOP3A-210ENST00000580713 Q8N402 240 aa8.56□□□□□ -1.04
TOP3A-210ENST00000580713 CAPSLQ8WWF8 208 aa8.56□□□□□ -1.04
TOP3A-210ENST00000580713 ARHGAP5-AS1Q96IT6 56 aa8.56□□□□□ -1.04
TOP3A-210ENST00000580713 NEDD4LQ96PU5 975 aa8.56□□□□□ -1.04
TOP3A-210ENST00000580713 SDHCQ99643 169 aaPredicted RBP8.56□□□□□ -1.04
TOP3A-210ENST00000580713 CCDC32Q9BV29 185 aa8.56□□□□□ -1.04
TOP3A-210ENST00000580713 PECRQ9BY49 303 aa8.56□□□□□ -1.04
TOP3A-210ENST00000580713 AUNIPQ9H7T9 357 aa8.56□□□□□ -1.04
TOP3A-210ENST00000580713 NLKQ9UBE8 527 aa8.56□□□□□ -1.04
TOP3A-210ENST00000580713 GLS2Q9UI32 602 aa8.56□□□□□ -1.04
TOP3A-210ENST00000580713 LSM4Q9Y4Z0 139 aaKnown RBP8.56□□□□□ -1.04
TOP3A-210ENST00000580713 TMEM235A6NFC5 223 aa8.55□□□□□ -1.04
TOP3A-210ENST00000580713 GABARAPH6UMI1 98 aa8.55□□□□□ -1.04
TOP3A-210ENST00000580713 PDCD6O75340 191 aa8.55□□□□□ -1.04
TOP3A-210ENST00000580713 LPLP06858 475 aa8.55□□□□□ -1.04
TOP3A-210ENST00000580713 PTHLHP12272 177 aa8.55□□□□□ -1.04
TOP3A-210ENST00000580713 HIST1H1DP16402 221 aaKnown RBP8.55□□□□□ -1.04
TOP3A-210ENST00000580713 FUT3P21217 361 aa8.55□□□□□ -1.04
TOP3A-210ENST00000580713 CHATP28329 748 aa8.55□□□□□ -1.04
TOP3A-210ENST00000580713 DUSP1P28562 367 aa8.55□□□□□ -1.04
TOP3A-210ENST00000580713 PRSS3P35030 304 aa8.55□□□□□ -1.04
TOP3A-210ENST00000580713 RPL31P62899 125 aaKnown RBP8.55□□□□□ -1.04
TOP3A-210ENST00000580713 SCN1BQ07699 218 aa8.55□□□□□ -1.04
TOP3A-210ENST00000580713 ZNF146Q15072 292 aa8.55□□□□□ -1.04
TOP3A-210ENST00000580713 ZNF260Q3ZCT1 412 aa8.55□□□□□ -1.04
TOP3A-210ENST00000580713 RNASE12Q5GAN4 147 aaKnown RBP8.55□□□□□ -1.04
TOP3A-210ENST00000580713 PLAC9Q5JTB6 97 aa8.55□□□□□ -1.04
TOP3A-210ENST00000580713 ATAD3CQ5T2N8 411 aa8.55□□□□□ -1.04
TOP3A-210ENST00000580713 SIGIRRQ6IA17 410 aa8.55□□□□□ -1.04
TOP3A-210ENST00000580713 C10orf99Q6UWK7 81 aa8.55□□□□□ -1.04
TOP3A-210ENST00000580713 ETV3LQ6ZN32 361 aa8.55□□□□□ -1.04
TOP3A-210ENST00000580713 SMIM4Q8WVI0 70 aa8.55□□□□□ -1.04
TOP3A-210ENST00000580713 MALSU1Q96EH3 234 aa8.55□□□□□ -1.04
TOP3A-210ENST00000580713 RCHY1Q96PM5 261 aa8.55□□□□□ -1.04
TOP3A-210ENST00000580713 SPACA1Q9HBV2 294 aa8.55□□□□□ -1.04
TOP3A-210ENST00000580713 PLEKHJ1Q9NW61 149 aa8.55□□□□□ -1.04
TOP3A-210ENST00000580713 OR14J1Q9UGF5 321 aa8.55□□□□□ -1.04
TOP3A-210ENST00000580713 HSF4Q9ULV5 492 aa8.55□□□□□ -1.04
TOP3A-210ENST00000580713 TBL2Q9Y4P3 447 aaKnown RBP8.55□□□□□ -1.04
TOP3A-210ENST00000580713 HILPDAQ9Y5L2 63 aa8.55□□□□□ -1.04
TOP3A-210ENST00000580713 DNAH7Q8WXX0 4024 aa8.54□□□□□ -1.04
TOP3A-210ENST00000580713 SERPINE3A8MV23 424 aa8.54□□□□□ -1.04
TOP3A-210ENST00000580713 NUDT19A8MXV4 375 aa8.54□□□□□ -1.04
TOP3A-210ENST00000580713 SULT1C2O00338 296 aa8.54□□□□□ -1.04
TOP3A-210ENST00000580713 MFNGO00587 321 aa8.54□□□□□ -1.04
TOP3A-210ENST00000580713 SH2D1BO14796 132 aa8.54□□□□□ -1.04
TOP3A-210ENST00000580713 DEGS1O15121 323 aa8.54□□□□□ -1.04
TOP3A-210ENST00000580713 GSTZ1O43708 216 aaPredicted RBP8.54□□□□□ -1.04
TOP3A-210ENST00000580713 UPK1BO75841 260 aa8.54□□□□□ -1.04
TOP3A-210ENST00000580713 HAND1O96004 215 aa8.54□□□□□ -1.04
TOP3A-210ENST00000580713 ZNF44P15621 663 aa8.54□□□□□ -1.04
TOP3A-210ENST00000580713 CCL3L1P16619 93 aa8.54□□□□□ -1.04
TOP3A-210ENST00000580713 CEBPDP49716 269 aaPredicted RBP8.54□□□□□ -1.04
TOP3A-210ENST00000580713 THBS3P49746 956 aa8.54□□□□□ -1.04
TOP3A-210ENST00000580713 RAB25P57735 213 aa8.54□□□□□ -1.04
TOP3A-210ENST00000580713 GNG2P59768 71 aa8.54□□□□□ -1.04
TOP3A-210ENST00000580713 BAK1Q16611 211 aa8.54□□□□□ -1.04
TOP3A-210ENST00000580713 PNLIPRP3Q17RR3 467 aa8.54□□□□□ -1.04
TOP3A-210ENST00000580713 TRIQKQ629K1 86 aa8.54□□□□□ -1.04
TOP3A-210ENST00000580713 TMEM200BQ69YZ2 307 aa8.54□□□□□ -1.04
TOP3A-210ENST00000580713 Q6P435 159 aa8.54□□□□□ -1.04
TOP3A-210ENST00000580713 C6orf201Q7Z4U5 140 aa8.54□□□□□ -1.04
TOP3A-210ENST00000580713 RTN4RL2Q86UN3 420 aa8.54□□□□□ -1.04
TOP3A-210ENST00000580713 OR52I2Q8NH67 350 aa8.54□□□□□ -1.04
TOP3A-210ENST00000580713 FCAMRQ8WWV6 532 aa8.54□□□□□ -1.04
TOP3A-210ENST00000580713 THAP7Q9BT49 309 aaPredicted RBP8.54□□□□□ -1.04
TOP3A-210ENST00000580713 IFT22Q9H7X7 185 aa8.54□□□□□ -1.04
TOP3A-210ENST00000580713 SCPEP1Q9HB40 452 aa8.54□□□□□ -1.04
TOP3A-210ENST00000580713 ZNF581Q9P0T4 197 aa8.54□□□□□ -1.04
TOP3A-210ENST00000580713 RCC2Q9P258 522 aaKnown RBP8.54□□□□□ -1.04
TOP3A-210ENST00000580713 IGKV1D-17A0A075B6S4 117 aa8.53□□□□□ -1.04
TOP3A-210ENST00000580713 RFPL4AA6NLU0 287 aa8.53□□□□□ -1.04
TOP3A-210ENST00000580713 MCRIP1C9JLW8 97 aa8.53□□□□□ -1.04
TOP3A-210ENST00000580713 RFPL4AL1F8VTS6 287 aa8.53□□□□□ -1.04
TOP3A-210ENST00000580713 SIRPB1O00241 398 aa8.53□□□□□ -1.04
TOP3A-210ENST00000580713 CA11O75493 328 aa8.53□□□□□ -1.04
TOP3A-210ENST00000580713 OR2H2O95918 312 aa8.53□□□□□ -1.04
TOP3A-210ENST00000580713 CD3GP09693 182 aa8.53□□□□□ -1.04
TOP3A-210ENST00000580713 PSG2P11465 335 aa8.53□□□□□ -1.04
TOP3A-210ENST00000580713 IL7P13232 177 aa8.53□□□□□ -1.04
TOP3A-210ENST00000580713 ECI1P42126 302 aa8.53□□□□□ -1.04
TOP3A-210ENST00000580713 INPP1P49441 399 aa8.53□□□□□ -1.04
TOP3A-210ENST00000580713 MRPS15P82914 257 aaKnown RBP8.53□□□□□ -1.04
TOP3A-210ENST00000580713 ARFRP1Q13795 201 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms