RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 ELOVL1Q9BW60 279 aa13.89□□□□□ -0.19
MKS1-209ENST00000580127 STEAP1Q9UHE8 339 aa13.89□□□□□ -0.19
MKS1-209ENST00000580127 IGHV7-81A0A0B4J1V7 117 aa13.88□□□□□ -0.19
MKS1-209ENST00000580127 DYNC1I1O14576 645 aa13.88□□□□□ -0.19
MKS1-209ENST00000580127 SC5DO75845 299 aa13.88□□□□□ -0.19
MKS1-209ENST00000580127 OR8U9P0C7N5 309 aa13.88□□□□□ -0.19
MKS1-209ENST00000580127 SPNP16150 400 aa13.88□□□□□ -0.19
MKS1-209ENST00000580127 MGMTP16455 207 aa13.88□□□□□ -0.19
MKS1-209ENST00000580127 BLVRBP30043 206 aaPredicted RBP13.88□□□□□ -0.19
MKS1-209ENST00000580127 MC5RP33032 325 aa13.88□□□□□ -0.19
MKS1-209ENST00000580127 CAPGP40121 348 aa13.88□□□□□ -0.19
MKS1-209ENST00000580127 OR2G6Q5TZ20 316 aa13.88□□□□□ -0.19
MKS1-209ENST00000580127 OR2AK2Q8NG84 335 aa13.88□□□□□ -0.19
MKS1-209ENST00000580127 DLX4Q92988 240 aaPredicted RBP13.88□□□□□ -0.19
MKS1-209ENST00000580127 NABP2Q9BQ15 211 aa13.88□□□□□ -0.19
MKS1-209ENST00000580127 BANF2Q9H503 90 aa13.88□□□□□ -0.19
MKS1-209ENST00000580127 GHRLQ9UBU3 117 aa13.88□□□□□ -0.19
MKS1-209ENST00000580127 FOXA2Q9Y261 457 aaPredicted RBP13.88□□□□□ -0.19
MKS1-209ENST00000580127 RYR3Q15413 4870 aa13.88□□□□□ -0.19
MKS1-209ENST00000580127 TRBV5-5A0A0J9YX44 114 aa13.87□□□□□ -0.19
MKS1-209ENST00000580127 H3BNX3 289 aa13.87□□□□□ -0.19
MKS1-209ENST00000580127 MAS1P04201 325 aa13.87□□□□□ -0.19
MKS1-209ENST00000580127 FRMD6-AS1P0C7T7 363 aa13.87□□□□□ -0.19
MKS1-209ENST00000580127 GP9P14770 177 aa13.87□□□□□ -0.19
MKS1-209ENST00000580127 ADARB1P78563 741 aaKnown RBP13.87□□□□□ -0.19
MKS1-209ENST00000580127 PITPNAQ00169 270 aa13.87□□□□□ -0.19
MKS1-209ENST00000580127 OVCH2Q7RTZ1 564 aa13.87□□□□□ -0.19
MKS1-209ENST00000580127 OR52L2PQ8NGH6 319 aa13.87□□□□□ -0.19
MKS1-209ENST00000580127 ABHD5Q8WTS1 349 aa13.87□□□□□ -0.19
MKS1-209ENST00000580127 ORAI1Q96D31 301 aa13.87□□□□□ -0.19
MKS1-209ENST00000580127 RDH12Q96NR8 316 aa13.87□□□□□ -0.19
MKS1-209ENST00000580127 NEDD4LQ96PU5 975 aa13.87□□□□□ -0.19
MKS1-209ENST00000580127 MBNL3Q9NUK0 354 aaKnown RBP13.87□□□□□ -0.19
MKS1-209ENST00000580127 PIPOXQ9P0Z9 390 aa13.87□□□□□ -0.19
MKS1-209ENST00000580127 DIMT1Q9UNQ2 313 aaKnown RBP13.87□□□□□ -0.19
MKS1-209ENST00000580127 A0A1W2PN81 502 aa13.86□□□□□ -0.19
MKS1-209ENST00000580127 PDCD6O75340 191 aa13.86□□□□□ -0.19
MKS1-209ENST00000580127 HSPB1P04792 205 aaKnown RBP13.86□□□□□ -0.19
MKS1-209ENST00000580127 GSTP1P09211 210 aaKnown RBP13.86□□□□□ -0.19
MKS1-209ENST00000580127 FSTP19883 344 aa13.86□□□□□ -0.19
MKS1-209ENST00000580127 CHRNA7P36544 502 aa13.86□□□□□ -0.19
MKS1-209ENST00000580127 PPP1CCP36873 323 aaKnown RBP13.86□□□□□ -0.19
MKS1-209ENST00000580127 TAS2R43P59537 309 aa13.86□□□□□ -0.19
MKS1-209ENST00000580127 ECSCRQ19T08 205 aa13.86□□□□□ -0.19
MKS1-209ENST00000580127 ASPHD1Q5U4P2 390 aa13.86□□□□□ -0.19
MKS1-209ENST00000580127 DMKNQ6E0U4 476 aaPredicted RBP13.86□□□□□ -0.19
MKS1-209ENST00000580127 ACSM6Q6P461 480 aa13.86□□□□□ -0.19
MKS1-209ENST00000580127 ZNF833PQ6ZTB9 187 aa13.86□□□□□ -0.19
MKS1-209ENST00000580127 TMEM80Q96HE8 168 aa13.86□□□□□ -0.19
MKS1-209ENST00000580127 UQCC2Q9BRT2 126 aa13.86□□□□□ -0.19
MKS1-209ENST00000580127 MRPL20Q9BYC9 149 aaKnown RBP13.86□□□□□ -0.19
MKS1-209ENST00000580127 TOLLIPQ9H0E2 274 aa13.86□□□□□ -0.19
MKS1-209ENST00000580127 TRAV8-7A0A075B6U6 113 aa13.85□□□□□ -0.19
MKS1-209ENST00000580127 RAB29O14966 203 aa13.85□□□□□ -0.19
MKS1-209ENST00000580127 RBBP9O75884 186 aa13.85□□□□□ -0.19
MKS1-209ENST00000580127 LGALS1P09382 135 aaKnown RBP13.85□□□□□ -0.19
MKS1-209ENST00000580127 SMN1Q16637 294 aaKnown RBP13.85□□□□□ -0.19
MKS1-209ENST00000580127 FAM71F2Q6NXP2 309 aa13.85□□□□□ -0.19
MKS1-209ENST00000580127 NKAIN3Q8N8D7 197 aa13.85□□□□□ -0.19
MKS1-209ENST00000580127 RITA1Q96K30 269 aa13.85□□□□□ -0.19
MKS1-209ENST00000580127 CITED4Q96RK1 184 aa13.85□□□□□ -0.19
MKS1-209ENST00000580127 SLC29A1Q99808 456 aa13.85□□□□□ -0.19
MKS1-209ENST00000580127 RNF5Q99942 180 aa13.85□□□□□ -0.19
MKS1-209ENST00000580127 A0A1W2PPK0 400 aa13.84□□□□□ -0.19
MKS1-209ENST00000580127 RRHO14718 337 aa13.84□□□□□ -0.19
MKS1-209ENST00000580127 LDLRAD4O15165 306 aa13.84□□□□□ -0.19
MKS1-209ENST00000580127 WBP4O75554 376 aaKnown RBP13.84□□□□□ -0.19
MKS1-209ENST00000580127 NDUFA3O95167 84 aa13.84□□□□□ -0.19
MKS1-209ENST00000580127 UBBP0CG47 229 aa13.84□□□□□ -0.19
MKS1-209ENST00000580127 CNTFRP26992 372 aa13.84□□□□□ -0.19
MKS1-209ENST00000580127 MAPK3P27361 379 aaPredicted RBP13.84□□□□□ -0.19
MKS1-209ENST00000580127 SLURP1P55000 103 aa13.84□□□□□ -0.19
MKS1-209ENST00000580127 AKIRIN2Q53H80 203 aa13.84□□□□□ -0.19
MKS1-209ENST00000580127 ACTBL2Q562R1 376 aa13.84□□□□□ -0.19
MKS1-209ENST00000580127 ODF3L1Q8IXM7 274 aa13.84□□□□□ -0.19
MKS1-209ENST00000580127 OR13C5Q8NGS8 318 aa13.84□□□□□ -0.19
MKS1-209ENST00000580127 APH1BQ8WW43 257 aa13.84□□□□□ -0.19
MKS1-209ENST00000580127 Q96M66 194 aa13.84□□□□□ -0.19
MKS1-209ENST00000580127 OR14A2Q96R54 314 aa13.84□□□□□ -0.19
MKS1-209ENST00000580127 SLA2Q9H6Q3 261 aa13.84□□□□□ -0.19
MKS1-209ENST00000580127 NUBP2Q9Y5Y2 271 aa13.84□□□□□ -0.19
MKS1-209ENST00000580127 TRBV5-7A0A0A0MS05 114 aa13.83□□□□□ -0.2
MKS1-209ENST00000580127 OR5H14A6NHG9 310 aa13.83□□□□□ -0.2
MKS1-209ENST00000580127 H7C2Y5 167 aa13.83□□□□□ -0.2
MKS1-209ENST00000580127 OR3A3P47888 321 aa13.83□□□□□ -0.2
MKS1-209ENST00000580127 CRIP2P52943 208 aaPredicted RBP13.83□□□□□ -0.2
MKS1-209ENST00000580127 CX3CL1P78423 397 aa13.83□□□□□ -0.2
MKS1-209ENST00000580127 GNMTQ14749 295 aa13.83□□□□□ -0.2
MKS1-209ENST00000580127 CD200R1LQ6Q8B3 271 aa13.83□□□□□ -0.2
MKS1-209ENST00000580127 PPP1R27Q86WC6 154 aa13.83□□□□□ -0.2
MKS1-209ENST00000580127 ANKRD13BQ86YJ7 626 aa13.83□□□□□ -0.2
MKS1-209ENST00000580127 MRPL30Q8TCC3 161 aaKnown RBP13.83□□□□□ -0.2
MKS1-209ENST00000580127 IL1F10Q8WWZ1 152 aa13.83□□□□□ -0.2
MKS1-209ENST00000580127 ARPC1AQ92747 370 aa13.83□□□□□ -0.2
MKS1-209ENST00000580127 FBXL15Q9H469 300 aa13.83□□□□□ -0.2
MKS1-209ENST00000580127 SMPD3Q9NY59 655 aaPredicted RBP13.83□□□□□ -0.2
MKS1-209ENST00000580127 A3GALT2U3KPV4 340 aa13.83□□□□□ -0.2
MKS1-209ENST00000580127 SAA2-SAA4A0A096LPE2 208 aa13.82□□□□□ -0.2
MKS1-209ENST00000580127 MAGEA13PA6NCF6 341 aa13.82□□□□□ -0.2
MKS1-209ENST00000580127 BAG2O95816 211 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms