RNA–Protein interactions for RNA: ENST00000578658.1

TRAPPC8-205, Transcript of trafficking protein particle complex 8, humanhuman

TSL 5

Gene TRAPPC8, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-205ENST00000578658 ZNF230Q9UIE0 474 aaPredicted RBP2.59□□□□□ -1.99
TRAPPC8-205ENST00000578658 PRNDQ9UKY0 176 aa2.59□□□□□ -1.99
TRAPPC8-205ENST00000578658 RAB22AQ9UL26 194 aa2.59□□□□□ -1.99
TRAPPC8-205ENST00000578658 TRAPPC2LQ9UL33 140 aa2.59□□□□□ -1.99
TRAPPC8-205ENST00000578658 MCTS1Q9ULC4 181 aaKnown RBP2.59□□□□□ -1.99
TRAPPC8-205ENST00000578658 POLR1DQ9Y2S0 133 aa2.59□□□□□ -1.99
TRAPPC8-205ENST00000578658 RFNGQ9Y644 331 aa2.59□□□□□ -1.99
TRAPPC8-205ENST00000578658 ZNF780BQ9Y6R6 833 aa2.59□□□□□ -1.99
TRAPPC8-205ENST00000578658 CHD1O14646 1710 aa2.59□□□□□ -2
TRAPPC8-205ENST00000578658 PIK3C2GO75747 1445 aa2.59□□□□□ -2
TRAPPC8-205ENST00000578658 SSH2Q76I76 1423 aa2.59□□□□□ -2
TRAPPC8-205ENST00000578658 FANCAO15360 1455 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 BCL9LQ86UU0 1499 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 KDM5DQ9BY66 1539 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 TRAV36DV7A0A075B6V5 113 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 TRAV38-1A0A0B4J264 116 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 IGHV2OR16-5A0A0B4J2B6 119 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 A0A0G2JLM5 398 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 TMEM218A2RU14 115 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 A6NDN8 102 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 PPIHO43447 177 aaKnown RBP2.58□□□□□ -2
TRAPPC8-205ENST00000578658 OR7C2O60412 319 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 RAMP1O60894 148 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 FKBP6O75344 327 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 HPRT1P00492 218 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 IGHV2-5P01817 119 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 GKN3PP0CG01 181 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 ORM2P19652 201 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 RAB5AP20339 215 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 NPY1RP25929 384 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 IL12AP29459 219 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 SRIP30626 198 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 ARL2P36404 184 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 GALR1P47211 349 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 GABRA2P47869 451 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 RAB5CP51148 216 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 FABP6P51161 128 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 CDK6Q00534 326 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 PSG9Q00887 426 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 NEDD8Q15843 81 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 TMEM241Q24JQ0 296 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 ZNF181Q2M3W8 571 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 IAH1Q2TAA2 248 aaPredicted RBP2.58□□□□□ -2
TRAPPC8-205ENST00000578658 CEACAM16Q2WEN9 425 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 SCGB2B2Q4G0G5 96 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 ATP6AP1LQ52LC2 224 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 CLLU1Q5K131 121 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 COL5A1-AS1Q5SY13 56 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 AVPI1Q5T686 147 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 IGFL3Q6UXB1 125 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 ALKAL1Q6UXT8 129 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 C12orf54Q6X4T0 127 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 FBXW12Q6X9E4 464 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 STAC2Q6ZMT1 411 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 Q6ZSR6 202 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 NEGR1Q7Z3B1 354 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 OAFQ86UD1 273 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 GAPTQ8N292 157 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 OR51Q1Q8NH59 317 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 ZNF502Q8TBZ5 544 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 ZFAND1Q8TCF1 268 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 ZNF675Q8TD23 568 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 THEM6Q8WUY1 208 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 LCN9Q8WX39 176 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 RBPMSQ93062 196 aaKnown RBP2.58□□□□□ -2
TRAPPC8-205ENST00000578658 FAM104AQ969W3 186 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 TMEM159Q96B96 161 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 AURKBQ96GD4 344 aaPredicted RBP2.58□□□□□ -2
TRAPPC8-205ENST00000578658 LINC00477Q96M19 166 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 CNBD2Q96M20 576 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 ZNF649Q9BS31 505 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 NDFIP1Q9BT67 221 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 EXOSC4Q9NPD3 245 aaKnown RBP2.58□□□□□ -2
TRAPPC8-205ENST00000578658 C14orf105Q9NVL8 296 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 DMAC2Q9NW81 257 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 EHFQ9NZC4 300 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 MED11Q9P086 117 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 MRPL27Q9P0M9 148 aaKnown RBP2.58□□□□□ -2
TRAPPC8-205ENST00000578658 HS3ST2Q9Y278 367 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 LAMTOR2Q9Y2Q5 125 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.58□□□□□ -2
TRAPPC8-205ENST00000578658 V9GYS6 101 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 CACNA1SQ13698 1873 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 USP6P35125 1406 aa2.58□□□□□ -2
TRAPPC8-205ENST00000578658 TROQ12816 1431 aaPredicted RBP2.58□□□□□ -2
TRAPPC8-205ENST00000578658 DENND4BO75064 1496 aaPredicted RBP2.58□□□□□ -2
TRAPPC8-205ENST00000578658 ZCCHC11Q5TAX3 1644 aaKnown RBP2.57□□□□□ -2
TRAPPC8-205ENST00000578658 IFITM5A6NNB3 132 aa2.57□□□□□ -2
TRAPPC8-205ENST00000578658 ZNF726A6NNF4 738 aa2.57□□□□□ -2
TRAPPC8-205ENST00000578658 BTNL10A8MVZ5 291 aa2.57□□□□□ -2
TRAPPC8-205ENST00000578658 J3KT08 172 aa2.57□□□□□ -2
TRAPPC8-205ENST00000578658 NME4O00746 187 aa2.57□□□□□ -2
TRAPPC8-205ENST00000578658 RBFOX2O43251 390 aaKnown RBP eCLIP2.57□□□□□ -2
TRAPPC8-205ENST00000578658 PIAS1O75925 651 aa2.57□□□□□ -2
TRAPPC8-205ENST00000578658 CDRT1O95170 752 aa2.57□□□□□ -2
TRAPPC8-205ENST00000578658 IGHG2P01859 326 aa2.57□□□□□ -2
TRAPPC8-205ENST00000578658 LGALS2P05162 132 aa2.57□□□□□ -2
TRAPPC8-205ENST00000578658 FABP3P05413 133 aa2.57□□□□□ -2
TRAPPC8-205ENST00000578658 TDGF1P13385 188 aa2.57□□□□□ -2
TRAPPC8-205ENST00000578658 GABRG2P18507 467 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms