RNA–Protein interactions for RNA: ENST00000575431.1

CCDC40-214, Transcript of coiled-coil domain containing 40, humanhuman

TSL 3

Gene CCDC40, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-214ENST00000575431 SLC23A1Q9UHI7 598 aa7.72□□□□□ -1.17
CCDC40-214ENST00000575431 TCF19Q9Y242 345 aa7.72□□□□□ -1.17
CCDC40-214ENST00000575431 CEPT1Q9Y6K0 416 aa7.72□□□□□ -1.17
CCDC40-214ENST00000575431 TRBV6-7A0A0A0MS04 114 aa7.71□□□□□ -1.18
CCDC40-214ENST00000575431 A0A1B0GUS0 222 aa7.71□□□□□ -1.18
CCDC40-214ENST00000575431 FAM181BA6NEQ2 426 aa7.71□□□□□ -1.18
CCDC40-214ENST00000575431 HSD17B6O14756 317 aa7.71□□□□□ -1.18
CCDC40-214ENST00000575431 LANCL1O43813 399 aa7.71□□□□□ -1.18
CCDC40-214ENST00000575431 GPR137BO60478 399 aa7.71□□□□□ -1.18
CCDC40-214ENST00000575431 IGHV3-7P01780 117 aa7.71□□□□□ -1.18
CCDC40-214ENST00000575431 FAM106CPP0CH98 169 aa7.71□□□□□ -1.18
CCDC40-214ENST00000575431 PPP1CCP36873 323 aaKnown RBP7.71□□□□□ -1.18
CCDC40-214ENST00000575431 CEACAM6P40199 344 aa7.71□□□□□ -1.18
CCDC40-214ENST00000575431 ZNF134P52741 427 aa7.71□□□□□ -1.18
CCDC40-214ENST00000575431 TAS2R20P59543 309 aa7.71□□□□□ -1.18
CCDC40-214ENST00000575431 ACTG1P63261 375 aa7.71□□□□□ -1.18
CCDC40-214ENST00000575431 SPCS2Q15005 226 aa7.71□□□□□ -1.18
CCDC40-214ENST00000575431 UTF1Q5T230 341 aa7.71□□□□□ -1.18
CCDC40-214ENST00000575431 FAM71F2Q6NXP2 309 aa7.71□□□□□ -1.18
CCDC40-214ENST00000575431 C16orf82Q7Z2V1 217 aa7.71□□□□□ -1.18
CCDC40-214ENST00000575431 LYG1Q8N1E2 194 aa7.71□□□□□ -1.18
CCDC40-214ENST00000575431 OR10V1Q8NGI7 309 aa7.71□□□□□ -1.18
CCDC40-214ENST00000575431 PIFOQ8TCI5 191 aa7.71□□□□□ -1.18
CCDC40-214ENST00000575431 DYNC2LI1Q8TCX1 351 aa7.71□□□□□ -1.18
CCDC40-214ENST00000575431 GCDHQ92947 438 aaPredicted RBP7.71□□□□□ -1.18
CCDC40-214ENST00000575431 CYYR1Q96J86 154 aa7.71□□□□□ -1.18
CCDC40-214ENST00000575431 AKR1E2Q96JD6 320 aa7.71□□□□□ -1.18
CCDC40-214ENST00000575431 DUX5Q96PT3 197 aa7.71□□□□□ -1.18
CCDC40-214ENST00000575431 CABLES2Q9BTV7 478 aa7.71□□□□□ -1.18
CCDC40-214ENST00000575431 ST6GALNAC5Q9BVH7 336 aa7.71□□□□□ -1.18
CCDC40-214ENST00000575431 RABL2AQ9UBK7 228 aaPredicted RBP7.71□□□□□ -1.18
CCDC40-214ENST00000575431 RSL24D1Q9UHA3 163 aaKnown RBP7.71□□□□□ -1.18
CCDC40-214ENST00000575431 ANXA10Q9UJ72 324 aa7.71□□□□□ -1.18
CCDC40-214ENST00000575431 RABL2BQ9UNT1 228 aa7.71□□□□□ -1.18
CCDC40-214ENST00000575431 A0A1W2PPE3 182 aa7.7□□□□□ -1.18
CCDC40-214ENST00000575431 TMEM89A2RUT3 159 aa7.7□□□□□ -1.18
CCDC40-214ENST00000575431 FAM25AB3EWG3 89 aa7.7□□□□□ -1.18
CCDC40-214ENST00000575431 FAM25CB3EWG5 89 aa7.7□□□□□ -1.18
CCDC40-214ENST00000575431 FAM25GB3EWG6 89 aa7.7□□□□□ -1.18
CCDC40-214ENST00000575431 SULT1C2O00338 296 aa7.7□□□□□ -1.18
CCDC40-214ENST00000575431 RAB29O14966 203 aa7.7□□□□□ -1.18
CCDC40-214ENST00000575431 RGS5O15539 181 aa7.7□□□□□ -1.18
CCDC40-214ENST00000575431 HPGDSO60760 199 aa7.7□□□□□ -1.18
CCDC40-214ENST00000575431 NDUFA7O95182 113 aa7.7□□□□□ -1.18
CCDC40-214ENST00000575431 EIF4EP06730 217 aaKnown RBP7.7□□□□□ -1.18
CCDC40-214ENST00000575431 GSTT2P0CG29 244 aa7.7□□□□□ -1.18
CCDC40-214ENST00000575431 GSTT2BP0CG30 244 aa7.7□□□□□ -1.18
CCDC40-214ENST00000575431 ELK1P19419 428 aa7.7□□□□□ -1.18
CCDC40-214ENST00000575431 PRSS3P35030 304 aa7.7□□□□□ -1.18
CCDC40-214ENST00000575431 HABP2Q14520 560 aaPredicted RBP7.7□□□□□ -1.18
CCDC40-214ENST00000575431 GNMTQ14749 295 aa7.7□□□□□ -1.18
CCDC40-214ENST00000575431 DHRS7BQ6IAN0 325 aaPredicted RBP7.7□□□□□ -1.18
CCDC40-214ENST00000575431 CNIH2Q6PI25 160 aa7.7□□□□□ -1.18
CCDC40-214ENST00000575431 HOGA1Q86XE5 327 aa7.7□□□□□ -1.18
CCDC40-214ENST00000575431 TGIF2LXQ8IUE1 241 aa7.7□□□□□ -1.18
CCDC40-214ENST00000575431 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.7□□□□□ -1.18
CCDC40-214ENST00000575431 BEST4Q8NFU0 473 aa7.7□□□□□ -1.18
CCDC40-214ENST00000575431 OR4F5Q8NH21 305 aa7.7□□□□□ -1.18
CCDC40-214ENST00000575431 NUDCD2Q8WVJ2 157 aa7.7□□□□□ -1.18
CCDC40-214ENST00000575431 CAPSLQ8WWF8 208 aa7.7□□□□□ -1.18
CCDC40-214ENST00000575431 RTN4IP1Q8WWV3 396 aaPredicted RBP7.7□□□□□ -1.18
CCDC40-214ENST00000575431 S1PR3Q99500 378 aa7.7□□□□□ -1.18
CCDC40-214ENST00000575431 GINS4Q9BRT9 223 aa7.7□□□□□ -1.18
CCDC40-214ENST00000575431 NPFFR1Q9GZQ6 430 aa7.7□□□□□ -1.18
CCDC40-214ENST00000575431 RANBP3Q9H6Z4 567 aaPredicted RBP7.7□□□□□ -1.18
CCDC40-214ENST00000575431 SCPEP1Q9HB40 452 aa7.7□□□□□ -1.18
CCDC40-214ENST00000575431 TNFRSF19Q9NS68 423 aa7.7□□□□□ -1.18
CCDC40-214ENST00000575431 RDH8Q9NYR8 311 aa7.7□□□□□ -1.18
CCDC40-214ENST00000575431 ZNF230Q9UIE0 474 aaPredicted RBP7.7□□□□□ -1.18
CCDC40-214ENST00000575431 ELF5Q9UKW6 265 aaPredicted RBP7.7□□□□□ -1.18
CCDC40-214ENST00000575431 GAB2Q9UQC2 676 aa7.7□□□□□ -1.18
CCDC40-214ENST00000575431 IGHV1-3A0A0C4DH29 117 aa7.69□□□□□ -1.18
CCDC40-214ENST00000575431 IGKV1-6A0A0C4DH72 117 aa7.69□□□□□ -1.18
CCDC40-214ENST00000575431 A0A1W2PPI3 338 aa7.69□□□□□ -1.18
CCDC40-214ENST00000575431 A6NDX4 124 aa7.69□□□□□ -1.18
CCDC40-214ENST00000575431 FAM90A9PA6NNJ1 464 aa7.69□□□□□ -1.18
CCDC40-214ENST00000575431 M0QZK8 103 aa7.69□□□□□ -1.18
CCDC40-214ENST00000575431 TIMM23O14925 209 aa7.69□□□□□ -1.18
CCDC40-214ENST00000575431 SLC31A2O15432 143 aa7.69□□□□□ -1.18
CCDC40-214ENST00000575431 SSX5O60225 188 aa7.69□□□□□ -1.18
CCDC40-214ENST00000575431 HLA-DQB1P01920 261 aa7.69□□□□□ -1.18
CCDC40-214ENST00000575431 CD1BP29016 333 aa7.69□□□□□ -1.18
CCDC40-214ENST00000575431 COMPP49747 757 aaPredicted RBP7.69□□□□□ -1.18
CCDC40-214ENST00000575431 RAB13P51153 203 aa7.69□□□□□ -1.18
CCDC40-214ENST00000575431 MRPS10P82664 201 aaKnown RBP7.69□□□□□ -1.18
CCDC40-214ENST00000575431 SRSF2Q01130 221 aaKnown RBP7.69□□□□□ -1.18
CCDC40-214ENST00000575431 HERPUD1Q15011 391 aa7.69□□□□□ -1.18
CCDC40-214ENST00000575431 LY6EQ16553 131 aa7.69□□□□□ -1.18
CCDC40-214ENST00000575431 PLA1AQ53H76 456 aa7.69□□□□□ -1.18
CCDC40-214ENST00000575431 IGSF11Q5DX21 431 aa7.69□□□□□ -1.18
CCDC40-214ENST00000575431 ZNF833PQ6ZTB9 187 aa7.69□□□□□ -1.18
CCDC40-214ENST00000575431 IZUMO1Q8IYV9 350 aa7.69□□□□□ -1.18
CCDC40-214ENST00000575431 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.69□□□□□ -1.18
CCDC40-214ENST00000575431 SPATA3Q8NHX4 192 aa7.69□□□□□ -1.18
CCDC40-214ENST00000575431 DGCR14Q96DF8 476 aaKnown RBP7.69□□□□□ -1.18
CCDC40-214ENST00000575431 AGMATQ9BSE5 352 aa7.69□□□□□ -1.18
CCDC40-214ENST00000575431 C11orf54Q9H0W9 315 aaPredicted RBP7.69□□□□□ -1.18
CCDC40-214ENST00000575431 RBM38Q9H0Z9 239 aaKnown RBP7.69□□□□□ -1.18
CCDC40-214ENST00000575431 IFI27L2Q9H2X8 130 aa7.69□□□□□ -1.18
CCDC40-214ENST00000575431 IFT46Q9NQC8 304 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms