RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 ITGB1BP1O14713 200 aa6.87□□□□□ -1.31
SMG6-216ENST00000575176 SPINT2O43291 252 aa6.87□□□□□ -1.31
SMG6-216ENST00000575176 LANCL1O43813 399 aa6.87□□□□□ -1.31
SMG6-216ENST00000575176 SSX5O60225 188 aa6.87□□□□□ -1.31
SMG6-216ENST00000575176 YPEL1O60688 119 aa6.87□□□□□ -1.31
SMG6-216ENST00000575176 IGKV1D-33P01593 117 aa6.87□□□□□ -1.31
SMG6-216ENST00000575176 IGKV1-33P01594 117 aa6.87□□□□□ -1.31
SMG6-216ENST00000575176 SCTP09683 121 aa6.87□□□□□ -1.31
SMG6-216ENST00000575176 CD36P16671 472 aa6.87□□□□□ -1.31
SMG6-216ENST00000575176 MYL9P24844 172 aa6.87□□□□□ -1.31
SMG6-216ENST00000575176 OR3A3P47888 321 aa6.87□□□□□ -1.31
SMG6-216ENST00000575176 LSAMPQ13449 338 aa6.87□□□□□ -1.31
SMG6-216ENST00000575176 STEAP3Q658P3 488 aa6.87□□□□□ -1.31
SMG6-216ENST00000575176 CCDC144NLQ6NUI1 221 aa6.87□□□□□ -1.31
SMG6-216ENST00000575176 Q6ZS49 121 aa6.87□□□□□ -1.31
SMG6-216ENST00000575176 PRR18Q8N4B5 295 aa6.87□□□□□ -1.31
SMG6-216ENST00000575176 Q8N9W7 124 aa6.87□□□□□ -1.31
SMG6-216ENST00000575176 OR56B1Q8NGI3 324 aa6.87□□□□□ -1.31
SMG6-216ENST00000575176 OR5H6Q8NGV6 325 aa6.87□□□□□ -1.31
SMG6-216ENST00000575176 OR10R2Q8NGX6 335 aa6.87□□□□□ -1.31
SMG6-216ENST00000575176 RPEQ96AT9 228 aa6.87□□□□□ -1.31
SMG6-216ENST00000575176 EAF1Q96JC9 268 aaPredicted RBP6.87□□□□□ -1.31
SMG6-216ENST00000575176 RITA1Q96K30 269 aa6.87□□□□□ -1.31
SMG6-216ENST00000575176 NEDD4LQ96PU5 975 aa6.87□□□□□ -1.31
SMG6-216ENST00000575176 YPEL2Q96QA6 119 aa6.87□□□□□ -1.31
SMG6-216ENST00000575176 NABP2Q9BQ15 211 aa6.87□□□□□ -1.31
SMG6-216ENST00000575176 CHCHD6Q9BRQ6 235 aa6.87□□□□□ -1.31
SMG6-216ENST00000575176 URM1Q9BTM9 101 aaKnown RBP6.87□□□□□ -1.31
SMG6-216ENST00000575176 MRPL20Q9BYC9 149 aaKnown RBP6.87□□□□□ -1.31
SMG6-216ENST00000575176 ABCB10Q9NRK6 738 aa6.87□□□□□ -1.31
SMG6-216ENST00000575176 RAB22AQ9UL26 194 aa6.87□□□□□ -1.31
SMG6-216ENST00000575176 MOB4Q9Y3A3 225 aa6.87□□□□□ -1.31
SMG6-216ENST00000575176 LINC01548A6NM66 108 aa6.86□□□□□ -1.31
SMG6-216ENST00000575176 TOR1AO14656 332 aa6.86□□□□□ -1.31
SMG6-216ENST00000575176 PDCD5O14737 125 aa6.86□□□□□ -1.31
SMG6-216ENST00000575176 ST8SIA5O15466 376 aa6.86□□□□□ -1.31
SMG6-216ENST00000575176 FGF16O43320 207 aa6.86□□□□□ -1.31
SMG6-216ENST00000575176 RRP9O43818 475 aaKnown RBP6.86□□□□□ -1.31
SMG6-216ENST00000575176 TNFAIP8O95379 198 aa6.86□□□□□ -1.31
SMG6-216ENST00000575176 CD28P10747 220 aa6.86□□□□□ -1.31
SMG6-216ENST00000575176 GNB3P16520 340 aa6.86□□□□□ -1.31
SMG6-216ENST00000575176 CFHR3Q02985 330 aa6.86□□□□□ -1.31
SMG6-216ENST00000575176 ABCA11PQ4W5N1 156 aa6.86□□□□□ -1.31
SMG6-216ENST00000575176 TREML4Q6UXN2 200 aa6.86□□□□□ -1.31
SMG6-216ENST00000575176 TPRA1Q86W33 373 aa6.86□□□□□ -1.31
SMG6-216ENST00000575176 TSPAN14Q8NG11 270 aa6.86□□□□□ -1.31
SMG6-216ENST00000575176 OR13F1Q8NGS4 319 aa6.86□□□□□ -1.31
SMG6-216ENST00000575176 OR10X1Q8NGY0 326 aa6.86□□□□□ -1.31
SMG6-216ENST00000575176 OR2T6Q8NHC8 308 aa6.86□□□□□ -1.31
SMG6-216ENST00000575176 MAFIPQ8WZ33 124 aa6.86□□□□□ -1.31
SMG6-216ENST00000575176 OR2S2Q9NQN1 319 aa6.86□□□□□ -1.31
SMG6-216ENST00000575176 PLEKHJ1Q9NW61 149 aa6.86□□□□□ -1.31
SMG6-216ENST00000575176 GNG12Q9UBI6 72 aa6.86□□□□□ -1.31
SMG6-216ENST00000575176 NOTCH3Q9UM47 2321 aa6.85□□□□□ -1.31
SMG6-216ENST00000575176 TNCP24821 2201 aa6.85□□□□□ -1.31
SMG6-216ENST00000575176 H3BUI4 141 aa6.85□□□□□ -1.31
SMG6-216ENST00000575176 DIRAS3O95661 229 aa6.85□□□□□ -1.31
SMG6-216ENST00000575176 IGHG2P01859 326 aa6.85□□□□□ -1.31
SMG6-216ENST00000575176 CD3GP09693 182 aa6.85□□□□□ -1.31
SMG6-216ENST00000575176 CNTFRP26992 372 aa6.85□□□□□ -1.31
SMG6-216ENST00000575176 CD1BP29016 333 aa6.85□□□□□ -1.31
SMG6-216ENST00000575176 BRS3P32247 399 aa6.85□□□□□ -1.31
SMG6-216ENST00000575176 PSMD7P51665 324 aa6.85□□□□□ -1.31
SMG6-216ENST00000575176 F2RL1P55085 397 aa6.85□□□□□ -1.31
SMG6-216ENST00000575176 LINC00205P59089 165 aa6.85□□□□□ -1.31
SMG6-216ENST00000575176 SSBP2P81877 361 aaPredicted RBP6.85□□□□□ -1.31
SMG6-216ENST00000575176 NDPQ00604 133 aa6.85□□□□□ -1.31
SMG6-216ENST00000575176 CD83Q01151 205 aa6.85□□□□□ -1.31
SMG6-216ENST00000575176 ZNF260Q3ZCT1 412 aa6.85□□□□□ -1.31
SMG6-216ENST00000575176 RPL39P5Q59GN2 51 aa6.85□□□□□ -1.31
SMG6-216ENST00000575176 C19orf54Q5BKX5 351 aa6.85□□□□□ -1.31
SMG6-216ENST00000575176 IGSF11Q5DX21 431 aa6.85□□□□□ -1.31
SMG6-216ENST00000575176 FAM71F2Q6NXP2 309 aa6.85□□□□□ -1.31
SMG6-216ENST00000575176 Q6ZTK2 550 aa6.85□□□□□ -1.31
SMG6-216ENST00000575176 C11orf44Q8N8P7 122 aa6.85□□□□□ -1.31
SMG6-216ENST00000575176 RAB3CQ96E17 227 aa6.85□□□□□ -1.31
SMG6-216ENST00000575176 KCTD7Q96MP8 289 aa6.85□□□□□ -1.31
SMG6-216ENST00000575176 CITED2Q99967 270 aaPredicted RBP6.85□□□□□ -1.31
SMG6-216ENST00000575176 HSPB9Q9BQS6 159 aa6.85□□□□□ -1.31
SMG6-216ENST00000575176 PRSS22Q9GZN4 317 aa6.85□□□□□ -1.31
SMG6-216ENST00000575176 NAA50Q9GZZ1 169 aaKnown RBP6.85□□□□□ -1.31
SMG6-216ENST00000575176 SLC23A1Q9UHI7 598 aa6.85□□□□□ -1.31
SMG6-216ENST00000575176 ZNF230Q9UIE0 474 aaPredicted RBP6.85□□□□□ -1.31
SMG6-216ENST00000575176 ZNF107Q9UII5 783 aaPredicted RBP6.85□□□□□ -1.31
SMG6-216ENST00000575176 DAPK2Q9UIK4 370 aa6.85□□□□□ -1.31
SMG6-216ENST00000575176 A0A087WXM4 84 aa6.84□□□□□ -1.31
SMG6-216ENST00000575176 TRBV6-7A0A0A0MS04 114 aa6.84□□□□□ -1.31
SMG6-216ENST00000575176 LOC100506127A0A0U1RQW1 187 aa6.84□□□□□ -1.31
SMG6-216ENST00000575176 TMEM235A6NFC5 223 aa6.84□□□□□ -1.31
SMG6-216ENST00000575176 SERPINE3A8MV23 424 aa6.84□□□□□ -1.31
SMG6-216ENST00000575176 TXNL1O43396 289 aa6.84□□□□□ -1.31
SMG6-216ENST00000575176 GABARAPO95166 117 aa6.84□□□□□ -1.31
SMG6-216ENST00000575176 NDUFA3O95167 84 aa6.84□□□□□ -1.31
SMG6-216ENST00000575176 IGLV2-14P01704 120 aa6.84□□□□□ -1.31
SMG6-216ENST00000575176 GAPDHP04406 335 aaKnown RBP6.84□□□□□ -1.31
SMG6-216ENST00000575176 LPLP06858 475 aa6.84□□□□□ -1.31
SMG6-216ENST00000575176 CT45A6P0DMU7 189 aa6.84□□□□□ -1.31
SMG6-216ENST00000575176 CT45A5P0DMU8 189 aa6.84□□□□□ -1.31
SMG6-216ENST00000575176 CT45A7P0DMV0 189 aa6.84□□□□□ -1.31
SMG6-216ENST00000575176 TMEM11P17152 192 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms